`, where `T` is your document interface. This class will contain the actual implementation of your model's methods, interacting with the MongoDB collection. An example of such a model is `UsersSessions` (defined in `packages/models/src/models/UsersSessions.ts`), which extends `BaseRaw`.
+4. **Register the model**: Register your new model in the server startup process using `registerModel`.
+
+Models are typically accessed through proxified imports, for example, `import { Messages } from '@rocket.chat/models'`, which routes through a `LocalBroker`. The `BaseRaw` class (located at `packages/models/src/models/BaseRaw.ts`) also provides an override for `modelIndexes()` to define MongoDB indexes.
+
+**Call Chain for `BaseRaw` (upstream example):**
+
+`BaseRaw` (packages/models/src/models/BaseRaw.ts)
+ ← `UsersSessions` (packages/models/src/models/UsersSessions.ts)
+ ← `setConnectionStatus` (ee/packages/presence/src/Presence.ts)
+ ← `configureServer` (ee/apps/ddp-streamer/src/configureServer.ts)
+ ← `main` (apps/meteor/server/main.ts)
+
+## Tool Calls (8 calls, 36,867 tokens)
+
+**Step 1:** `search({"query":"model","layer":"server"})` → 569 tokens
+**Step 2:** `graph({"direction":"up","query":"BaseRaw","layer":"packages"})` → 1026 tokens
+**Step 3:** `implement({"symbolName":"Users","filename":"packages/models/src/models/Users.ts"})` → 53 tokens
+**Step 4:** `search({"query":"class Users extends BaseRaw","layer":"packages"})` → 18 tokens
+**Step 5:** `implement({"filename":"packages/models/src/models/UsersSessions.ts","symbolName":"UsersSessions"})` → 63 tokens
+**Step 6:** `search({"query":"extends BaseRaw","layer":"packages"})` → 15 tokens
+**Step 7:** `implement({"symbolName":"Users","filename":"apps/meteor/ee/server/models/Users.ts"})` → 137 tokens
+**Step 8:** `search({"query":"BaseRaw","layer":"packages"})` → 211 tokens
diff --git a/logs/answers-gemini-mcp-selfloop/tour-08-db-model-use.md b/logs/answers-gemini-mcp-selfloop/tour-08-db-model-use.md
new file mode 100644
index 0000000..90bafc6
--- /dev/null
+++ b/logs/answers-gemini-mcp-selfloop/tour-08-db-model-use.md
@@ -0,0 +1,43 @@
+# How do you use a database model to query data in Rocket.Chat?
+
+## Gemini Answer
+
+To query data in Rocket.Chat using a database model, you generally import the relevant model (e.g., `Users`) and then call its methods, which internally utilize the core `BaseRaw` class for MongoDB operations.
+
+Here's the call chain and explanation:
+
+**Call Chain:** `Your code` → `Users.findOneById` (or similar method) → `BaseRaw.find` → `MongoDB Collection.find`
+
+1. **Model Definition and Access**:
+ * Database models like `Users` are defined in `packages/models/src/index.ts`. These models extend `BaseRaw`, which provides the fundamental MongoDB collection operations.
+ * You would typically import a model like `Users` into your server-side code (e.g., `apps/meteor/app/api/server/v1/users.ts`).
+
+2. **Querying with Model Methods**:
+ * You interact with the database by calling methods on the imported model. For instance, to find a user by ID, you might use `Users.findOneById()`.
+ * Example usage can be seen in `apps/meteor/app/api/server/v1/users.ts`, where calls like `Users.findOneById(this.bodyParams.userId, { projection: fields })` are made.
+
+3. **Underlying Database Interaction (`BaseRaw.find`)**:
+ * The model methods (like `findOneById`) internally delegate to the methods provided by the `BaseRaw` class, located at `packages/models/src/models/BaseRaw.ts`.
+ * The `BaseRaw.find` method is responsible for executing the actual MongoDB query. Its implementation is as follows:
+
+```typescript
+ find(
+ query: Filter = {},
+ options?: FindOptions,
+ ): FindCursor> | FindCursor> {
+ const optionsDef = this.doNotMixInclusionAndExclusionFields(options);
+ return this.col.find(query, optionsDef);
+ }
+ ```
+
+ * As shown in `packages/models/src/models/BaseRaw.ts`, `this.col.find(query, optionsDef)` is the line where the MongoDB driver's `find` method is directly invoked with the provided query filter and options.
+
+In summary, you use a database model by importing it and calling its specific query methods (e.g., `findOneById`, `findByUsername`, `find`), which then utilize the `BaseRaw` class to interact directly with the MongoDB collection.
+
+## Tool Calls (5 calls, 17,288 tokens)
+
+**Step 1:** `search({"query":"Users.findOne"})` → 415 tokens
+**Step 2:** `graph({"direction":"down","file":"apps/meteor/app/api/server/v1/users.ts","layer":"server","query":"Users.)` → 14 tokens
+**Step 3:** `search({"query":"Users","layer":"packages"})` → 569 tokens
+**Step 4:** `graph({"file":"packages/models/src/index.ts","query":"Users","layer":"packages","direction":"down"})` → 598 tokens
+**Step 5:** `implement({"symbolName":"BaseRaw.find","filename":"packages/models/src/BaseRaw.ts"})` → 109 tokens
diff --git a/logs/answers-gemini-mcp-selfloop/tour-10-new-service.md b/logs/answers-gemini-mcp-selfloop/tour-10-new-service.md
new file mode 100644
index 0000000..219cea5
--- /dev/null
+++ b/logs/answers-gemini-mcp-selfloop/tour-10-new-service.md
@@ -0,0 +1,38 @@
+# How do you add a new service in Rocket.Chat?
+
+## Gemini Answer
+
+To add a new service in Rocket.Chat, you generally follow these steps, inspired by existing service implementations like `RoomService`:
+
+1. **Define the Service Interface:** Create an interface for your service in `packages/core-services/src/types/` that extends `IServiceClass`. This interface will define the methods your service will expose.
+
+2. **Implement the Service Class:** Create a new file for your service implementation, typically in `apps/meteor/server/services/your-service-name/service.ts`. This class should extend `ServiceClassInternal` (for monolith services) or `ServiceClass` (for microservices) from `packages/core-services/src/types/ServiceClass.ts`. You will then implement the methods defined in your service interface within this class.
+
+ * **Example:** `RoomService` in `apps/meteor/server/services/room/service.ts` extends `ServiceClassInternal` and implements `IRoomService`.
+
+3. **Register the Service:** Services are registered during the application startup. The `registerServices` function in `apps/meteor/server/services/startup.ts` is responsible for this. You would add an instance of your new service to the services registered here.
+
+ * **Call Chain:** `apps/meteor/server/main.ts` → `apps/meteor/server/services/startup.ts` → `registerServices`.
+
+4. **Utilize the Service:** Services in Rocket.Chat communicate via a bus using `proxify('IServiceName')` to get a proxy, and then `api.call('namespace.method')` to invoke methods on other services. This ensures loose coupling.
+
+**Key Files and Call Chain:**
+
+* **`packages/core-services/src/types/ServiceClass.ts`**: Defines the base `ServiceClass` and `IServiceClass` that all services extend.
+* **`apps/meteor/server/services/room/service.ts`**: An example of a service implementation (`RoomService`) extending `ServiceClassInternal`.
+* **`apps/meteor/server/services/startup.ts`**: Contains the `registerServices` function, which is the entry point for registering new services.
+* **`apps/meteor/server/main.ts`**: The main server entry point that calls `registerServices`.
+
+**Call Chain:**
+`apps/meteor/server/main.ts` → `apps/meteor/server/services/startup.ts` (`registerServices`) → Your new `ServiceClass` (e.g., `RoomService` in `apps/meteor/server/services/room/service.ts`).
+
+## Tool Calls (8 calls, 37,620 tokens)
+
+**Step 1:** `search({"query":"service"})` → 682 tokens
+**Step 2:** `implement({"symbolName":"service","filename":"apps/meteor/server/services/meteor/service.ts"})` → 182 tokens
+**Step 3:** `search({"query":"ServiceClass"})` → 167 tokens
+**Step 4:** `implement({"symbolName":"ServiceClass","filename":"packages/core-services/src/types/ServiceClass.ts"})` → 399 tokens
+**Step 5:** `graph({"file":"packages/core-services/src/types/ServiceClass.ts","query":"ServiceClass","direction":"up"})` → 248 tokens
+**Step 6:** `search({"query":"RoomService"})` → 84 tokens
+**Step 7:** `implement({"filename":"apps/meteor/server/services/room/service.ts","symbolName":"RoomService"})` → 1000 tokens
+**Step 8:** `graph({"direction":"up","file":"apps/meteor/server/services/room/service.ts","query":"RoomService"})` → 88 tokens
diff --git a/logs/answers-gemini-mcp-selfloop/tour-11-new-package.md b/logs/answers-gemini-mcp-selfloop/tour-11-new-package.md
new file mode 100644
index 0000000..984dde3
--- /dev/null
+++ b/logs/answers-gemini-mcp-selfloop/tour-11-new-package.md
@@ -0,0 +1,16 @@
+# How do you create a new package in the Rocket.Chat monorepo?
+
+## Gemini Answer
+
+
+
+## Tool Calls (8 calls, 21,600 tokens)
+
+**Step 1:** `search({"query":"create new package monorepo"})` → 18 tokens
+**Step 2:** `search({"query":"new package"})` → 68 tokens
+**Step 3:** `search({"query":"package.json","layer":"packages"})` → 77 tokens
+**Step 4:** `search({"query":"@rocket.chat/ui-kit","layer":"packages"})` → 16 tokens
+**Step 5:** `search({"query":"package.json"})` → 351 tokens
+**Step 6:** `implement({"filename":"packages/fuselage-ui-kit/package.json","symbolName":"package.json"})` → 45 tokens
+**Step 7:** `implement({"symbolName":"packages/fuselage-ui-kit/package.json","filename":"packages/fuselage-ui-kit/package.j)` → 57 tokens
+**Step 8:** `search({"query":"monorepo package structure"})` → 18 tokens
diff --git a/logs/baseline/claude-01-push-notifications.md b/logs/answers-gemini-nomcp/claude-01-push-notifications.md
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diff --git a/logs/baseline/claude-02-msg-permissions.md b/logs/answers-gemini-nomcp/claude-02-msg-permissions.md
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diff --git a/logs/baseline/claude-03-file-upload.md b/logs/answers-gemini-nomcp/claude-03-file-upload.md
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diff --git a/logs/baseline/claude-04-e2e-encryption.md b/logs/answers-gemini-nomcp/claude-04-e2e-encryption.md
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diff --git a/logs/baseline/claude-05-call-chain.md b/logs/answers-gemini-nomcp/claude-05-call-chain.md
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diff --git a/logs/baseline/claude-06-livechat-routing.md b/logs/answers-gemini-nomcp/claude-06-livechat-routing.md
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diff --git a/logs/baseline/claude-08-federation.md b/logs/answers-gemini-nomcp/claude-08-federation.md
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diff --git a/logs/baseline/new-09-realtime-streamer.md b/logs/answers-gemini-nomcp/new-09-realtime-streamer.md
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diff --git a/logs/baseline/new-10-apps-engine.md b/logs/answers-gemini-nomcp/new-10-apps-engine.md
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diff --git a/logs/baseline/new-11-settings.md b/logs/answers-gemini-nomcp/new-11-settings.md
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diff --git a/logs/baseline/new-12-ldap-auth.md b/logs/answers-gemini-nomcp/new-12-ldap-auth.md
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diff --git a/logs/baseline/new-13-room-creation.md b/logs/answers-gemini-nomcp/new-13-room-creation.md
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diff --git a/logs/baseline/new-14-ee-license.md b/logs/answers-gemini-nomcp/new-14-ee-license.md
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diff --git a/logs/baseline/new-15-impact-aftersave.md b/logs/answers-gemini-nomcp/new-15-impact-aftersave.md
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diff --git a/logs/baseline/new-16-impact-streamer.md b/logs/answers-gemini-nomcp/new-16-impact-streamer.md
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diff --git a/logs/baseline/new-17-slash-commands.md b/logs/answers-gemini-nomcp/new-17-slash-commands.md
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diff --git a/logs/baseline/new-18-webhook.md b/logs/answers-gemini-nomcp/new-18-webhook.md
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diff --git a/logs/baseline/new-19-message-rendering.md b/logs/answers-gemini-nomcp/new-19-message-rendering.md
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diff --git a/logs/baseline/new-20-proxify.md b/logs/answers-gemini-nomcp/new-20-proxify.md
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diff --git a/logs/baseline/new-21-impact-settings.md b/logs/answers-gemini-nomcp/new-21-impact-settings.md
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diff --git a/logs/baseline/new-22-2fa.md b/logs/answers-gemini-nomcp/new-22-2fa.md
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diff --git a/logs/baseline/new-23-omnichannel.md b/logs/answers-gemini-nomcp/new-23-omnichannel.md
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diff --git a/logs/baseline/new-24-autotranslate.md b/logs/answers-gemini-nomcp/new-24-autotranslate.md
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diff --git a/logs/baseline/new-25-search.md b/logs/answers-gemini-nomcp/new-25-search.md
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diff --git a/logs/baseline/new-26-team.md b/logs/answers-gemini-nomcp/new-26-team.md
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diff --git a/logs/baseline/new-27-video-conference.md b/logs/answers-gemini-nomcp/new-27-video-conference.md
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diff --git a/logs/baseline/tour-04-msg-client.md b/logs/answers-gemini-nomcp/tour-04-msg-client.md
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diff --git a/logs/baseline/tour-05-msg-server.md b/logs/answers-gemini-nomcp/tour-05-msg-server.md
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diff --git a/logs/baseline/tour-06-endpoint.md b/logs/answers-gemini-nomcp/tour-06-endpoint.md
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diff --git a/logs/baseline/tour-07-db-model-create.md b/logs/answers-gemini-nomcp/tour-07-db-model-create.md
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diff --git a/logs/baseline/tour-08-db-model-use.md b/logs/answers-gemini-nomcp/tour-08-db-model-use.md
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diff --git a/logs/baseline/tour-10-new-service.md b/logs/answers-gemini-nomcp/tour-10-new-service.md
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diff --git a/logs/baseline/tour-11-new-package.md b/logs/answers-gemini-nomcp/tour-11-new-package.md
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diff --git a/logs/baseline-eval.md b/logs/baseline-eval.md
deleted file mode 100644
index 00415a4..0000000
--- a/logs/baseline-eval.md
+++ /dev/null
@@ -1,50 +0,0 @@
-# Baseline Eval Report (No Tools)
-
-6/1/2026, 6:27:22 PM | Model: gemini-2.5-flash | Testcases: 34
-
-## Summary
-
-| Metric | Value |
-|--------|-------|
-| Avg tokens / question | 3,746 |
-| Total tokens | 127,358 |
-| Tools | NONE |
-
-## Per-Question
-
-| # | ID | Type | Subsystem | Tokens | Words |
-|---|---|---|---|------:|------:|
-| 1 | tour-04-msg-client | architecture | message chat | 2,767 | 670 |
-| 2 | tour-05-msg-server | call-chain | message chat | 3,644 | 630 |
-| 3 | tour-06-endpoint | pattern | api | 5,441 | 1162 |
-| 4 | tour-07-db-model-create | pattern | database | 5,801 | 1698 |
-| 5 | tour-08-db-model-use | pattern | database | 4,024 | 1172 |
-| 6 | tour-10-new-service | pattern | services | 5,624 | 1583 |
-| 7 | tour-11-new-package | pattern | tooling | 4,081 | 906 |
-| 8 | claude-01-push-notifications | architecture | push notifications | 4,124 | 1249 |
-| 9 | claude-02-msg-permissions | locate | authorization | 2,481 | 336 |
-| 10 | claude-03-file-upload | architecture | file upload | 3,125 | 882 |
-| 11 | claude-04-e2e-encryption | architecture | e2e encryption | 3,144 | 972 |
-| 12 | claude-05-call-chain | call-chain | message chat | 4,561 | 678 |
-| 13 | claude-06-livechat-routing | routing | livechat | 2,815 | 475 |
-| 14 | claude-07-api-endpoints | locate | api | 2,895 | 714 |
-| 15 | claude-08-federation | routing | federation | 3,674 | 689 |
-| 16 | new-09-realtime-streamer | architecture | streamer | 2,954 | 723 |
-| 17 | new-10-apps-engine | architecture | apps engine | 4,342 | 847 |
-| 18 | new-11-settings | architecture | settings | 3,579 | 1029 |
-| 19 | new-12-ldap-auth | routing | authentication | 3,852 | 1014 |
-| 20 | new-13-room-creation | call-chain | rooms | 3,409 | 748 |
-| 21 | new-14-ee-license | locate | ee licensing | 3,305 | 817 |
-| 22 | new-15-impact-aftersave | impact | message chat | 3,317 | 831 |
-| 23 | new-16-impact-streamer | impact | streamer | 3,101 | 698 |
-| 24 | new-17-slash-commands | pattern | slash commands | 3,029 | 800 |
-| 25 | new-18-webhook | routing | integrations | 3,795 | 913 |
-| 26 | new-19-message-rendering | architecture | message rendering | 3,987 | 964 |
-| 27 | new-20-proxify | locate | core-services | 3,208 | 876 |
-| 28 | new-21-impact-settings | impact | settings | 2,722 | 646 |
-| 29 | new-22-2fa | architecture | 2fa | 5,144 | 1555 |
-| 30 | new-23-omnichannel | call-chain | omnichannel | 3,538 | 831 |
-| 31 | new-24-autotranslate | locate | autotranslate | 3,793 | 763 |
-| 32 | new-25-search | locate | search | 3,751 | 913 |
-| 33 | new-26-team | locate | team | 4,342 | 1183 |
-| 34 | new-27-video-conference | locate | video conference | 3,989 | 1095 |
\ No newline at end of file
diff --git a/logs/eval-1-nomcp-vs-mcp-agent.md b/logs/eval-1-nomcp-vs-mcp-agent.md
new file mode 100644
index 0000000..966f70e
--- /dev/null
+++ b/logs/eval-1-nomcp-vs-mcp-agent.md
@@ -0,0 +1,50 @@
+# eval-1 — Does MCP help? (Gemini no-MCP vs Gemini + MCP)
+
+6/29/2026, 6:55:06 PM | 34 testcases | deterministic, no Gemini/key
+
+Coverage = answer mentions of {core files ∪ key symbols}. Semantic comparison (is the MCP answer better) is added by Claude.
+
+| Metric | no MCP | with MCP | change |
+|---|---:|---:|---|
+| Avg coverage | 16.2% | 41.7% | +25.5 pts |
+| Questions improved | — | — | 25/34 |
+| Avg tokens / question | 3,746 | 34,341 | ×9.2 |
+
+> MCP lifts coverage 16% → 42% at ×9.2 token cost.
+
+| # | id | type | cov no-MCP | cov MCP | Δ | tok no-MCP | tok MCP |
+|---|---|---|---:|---:|---:|---:|---:|
+| 1 | tour-04-msg-client | architecture | 18% | 18% | +0 | 2,767 | 54,125 |
+| 2 | new-19-message-rendering | architecture | 17% | 0% | -17 | 3,987 | 31,413 |
+| 3 | claude-01-push-notifications | architecture | 18% | 36% | +18 | 4,124 | 28,292 |
+| 4 | new-09-realtime-streamer | architecture | 0% | 11% | +11 | 2,954 | 47,494 |
+| 5 | tour-05-msg-server | call-chain | 50% | 25% | -25 | 3,644 | 74,703 |
+| 6 | claude-05-call-chain | call-chain | 31% | 31% | +0 | 4,561 | 90,507 |
+| 7 | new-24-autotranslate | locate | 60% | 80% | +20 | 3,793 | 33,647 |
+| 8 | new-15-impact-aftersave | impact | 43% | 29% | -14 | 3,317 | 11,654 |
+| 9 | new-16-impact-streamer | impact | 13% | 25% | +13 | 3,101 | 7,322 |
+| 10 | claude-08-federation | routing | 0% | 33% | +33 | 3,674 | 30,722 |
+| 11 | new-18-webhook | routing | 0% | 67% | +67 | 3,795 | 21,849 |
+| 12 | claude-07-api-endpoints | locate | 17% | 58% | +42 | 2,895 | 25,165 |
+| 13 | new-25-search | locate | 0% | 0% | +0 | 3,751 | 44,779 |
+| 14 | new-27-video-conference | locate | 0% | 67% | +67 | 3,989 | 79,642 |
+| 15 | tour-06-endpoint | pattern | 17% | 33% | +17 | 5,441 | 28,048 |
+| 16 | new-17-slash-commands | pattern | 0% | 33% | +33 | 3,029 | 43,133 |
+| 17 | new-11-settings | architecture | 0% | 50% | +50 | 3,579 | 39,803 |
+| 18 | claude-03-file-upload | architecture | 22% | 33% | +11 | 3,125 | 30,868 |
+| 19 | new-10-apps-engine | architecture | 20% | 20% | +0 | 4,342 | 27,165 |
+| 20 | new-20-proxify | locate | 29% | 57% | +29 | 3,208 | 35,643 |
+| 21 | tour-07-db-model-create | pattern | 0% | 40% | +40 | 5,801 | 36,867 |
+| 22 | tour-08-db-model-use | pattern | 0% | 0% | +0 | 4,024 | 17,288 |
+| 23 | tour-11-new-package | pattern | 50% | 0% | -50 | 4,081 | 21,600 |
+| 24 | tour-10-new-service | pattern | 0% | 88% | +88 | 5,624 | 37,620 |
+| 25 | new-21-impact-settings | impact | 17% | 33% | +17 | 2,722 | 6,793 |
+| 26 | new-22-2fa | architecture | 0% | 75% | +75 | 5,144 | 53,073 |
+| 27 | claude-04-e2e-encryption | architecture | 0% | 45% | +45 | 3,144 | 36,711 |
+| 28 | new-12-ldap-auth | routing | 13% | 88% | +75 | 3,852 | 18,276 |
+| 29 | claude-02-msg-permissions | locate | 13% | 75% | +63 | 2,481 | 6,030 |
+| 30 | new-14-ee-license | locate | 0% | 50% | +50 | 3,305 | 23,456 |
+| 31 | new-13-room-creation | call-chain | 50% | 67% | +17 | 3,409 | 32,547 |
+| 32 | new-23-omnichannel | call-chain | 14% | 43% | +29 | 3,538 | 36,901 |
+| 33 | claude-06-livechat-routing | routing | 8% | 42% | +33 | 2,815 | 42,461 |
+| 34 | new-26-team | locate | 33% | 67% | +33 | 4,342 | 12,007 |
diff --git a/logs/eval-2-mcp-tools.md b/logs/eval-2-mcp-tools.md
new file mode 100644
index 0000000..b00bcf8
--- /dev/null
+++ b/logs/eval-2-mcp-tools.md
@@ -0,0 +1,161 @@
+# Layer 1 — Tool Eval Report
+
+6/29/2026, 6:55:32 PM
+
+## Summary: 29/34 passed
+
+| Metric | Average |
+|--------|---------|
+| File recall (search, substring) | 97.1% |
+| Symbol recall (search, substring) | 100.0% |
+| Graph reachability | 100.0% |
+| **Precision@5** (primary query) | 24.1% |
+| **Recall@5 / @10 / @20** | 40.0% / 41.2% / 43.7% |
+| **MRR** (core files) | 0.336 |
+| **F1@5** | 28.6% |
+| **Chain order LCS** (ordered Qs: 17, report-only) | 78.7% |
+
+## Per-Testcase Results
+
+| # | ID | Subsystem | Files | Symbols | Graph | Pass |
+|---|---|---|---|---|---|---|
+| 1 | tour-04-msg-client | message chat | 6/6 | 5/5 | 6/6 | PASS |
+| 2 | new-19-message-rendering | message rendering | 6/6 | 4/4 | 2/2 | PASS |
+| 3 | claude-01-push-notifications | push notifications | 6/6 | 5/5 | 6/6 | PASS |
+| 4 | new-09-realtime-streamer | streamer | 5/5 | 4/4 | 5/5 | PASS |
+| 5 | tour-05-msg-server | message chat | 6/6 | 3/3 | 5/5 | PASS |
+| 6 | claude-05-call-chain | message chat | 6/6 | 8/8 | 8/8 | PASS |
+| 7 | new-24-autotranslate | autotranslate | 6/6 | 2/2 | 3/3 | PASS |
+| 8 | new-15-impact-aftersave | message chat | 6/6 | 4/4 | 3/3 | PASS |
+| 9 | new-16-impact-streamer | streamer | 5/5 | 5/5 | 3/3 | PASS |
+| 10 | claude-08-federation | federation | 6/6 | 5/5 | 4/4 | PASS |
+| 11 | new-18-webhook | integrations | 6/6 | 3/3 | 3/3 | PASS |
+| 12 | claude-07-api-endpoints | api | 5/6 | 5/5 | 7/7 | **FAIL** |
+| 13 | new-25-search | search | 6/6 | 3/3 | 3/3 | PASS |
+| 14 | new-27-video-conference | video conference | 6/6 | 2/2 | - | PASS |
+| 15 | tour-06-endpoint | api | 4/6 | 4/4 | 2/2 | **FAIL** |
+| 16 | new-17-slash-commands | slash commands | 6/6 | 2/2 | 4/4 | PASS |
+| 17 | new-11-settings | settings | 6/6 | 3/3 | 3/3 | PASS |
+| 18 | claude-03-file-upload | file upload | 6/6 | 6/6 | 3/3 | PASS |
+| 19 | new-10-apps-engine | apps engine | 5/6 | 5/5 | 5/5 | **FAIL** |
+| 20 | new-20-proxify | core-services | 6/6 | 4/4 | 3/3 | PASS |
+| 21 | tour-07-db-model-create | database | 6/6 | 3/3 | 2/2 | PASS |
+| 22 | tour-08-db-model-use | database | 6/6 | 2/2 | 2/2 | PASS |
+| 23 | tour-11-new-package | tooling | 5/5 | 1/1 | - | PASS |
+| 24 | tour-10-new-service | services | 6/6 | 4/4 | 4/4 | PASS |
+| 25 | new-21-impact-settings | settings | 5/5 | 3/3 | 3/3 | PASS |
+| 26 | new-22-2fa | 2fa | 6/6 | 4/4 | 4/4 | PASS |
+| 27 | claude-04-e2e-encryption | e2e encryption | 6/6 | 6/6 | 5/5 | PASS |
+| 28 | new-12-ldap-auth | authentication | 5/6 | 4/4 | 4/4 | **FAIL** |
+| 29 | claude-02-msg-permissions | authorization | 6/6 | 4/4 | 4/4 | PASS |
+| 30 | new-14-ee-license | ee licensing | 6/6 | 5/5 | 3/3 | PASS |
+| 31 | new-13-room-creation | rooms | 6/6 | 3/3 | 3/3 | PASS |
+| 32 | new-23-omnichannel | omnichannel | 5/6 | 4/4 | 3/3 | **FAIL** |
+| 33 | claude-06-livechat-routing | livechat | 6/6 | 6/6 | 6/6 | PASS |
+| 34 | new-26-team | team | 6/6 | 2/2 | - | PASS |
+## Retrieval Ranking (primary query → search top-50)
+
+| # | ID | Query | P@5 | R@5 | R@10 | R@20 | MRR | Diagnosis |
+|---|---|---|----:|----:|----:|----:|----:|---|
+| 1 | tour-04-msg-client | `RoomBody` | 20% | 17% | 17% | 17% | 0.17 | recall-miss |
+| 2 | new-19-message-rendering | `parse` | 20% | 50% | 50% | 50% | 0.50 | recall-miss |
+| 3 | claude-01-push-notifications | `sendAllNotifications` | 20% | 17% | 17% | 17% | 0.17 | recall-miss |
+| 4 | new-09-realtime-streamer | `notifyOnMessageChange` | 20% | 20% | 20% | 20% | 0.20 | recall-miss |
+| 5 | tour-05-msg-server | `ChatAPI` | 20% | 20% | 20% | 20% | 0.10 | recall-miss |
+| 6 | claude-05-call-chain | `sendMessage` | 0% | 0% | 0% | 50% | 0.04 | mixed |
+| 7 | new-24-autotranslate | `TranslationProviderRegistry` | 20% | 67% | 67% | 67% | 0.67 | recall-miss |
+| 8 | new-15-impact-aftersave | `afterSaveMessage` | 20% | 33% | 33% | 33% | 0.11 | recall-miss |
+| 9 | new-16-impact-streamer | `Streamer` | 40% | 33% | 33% | 67% | 0.11 | mixed |
+| 10 | claude-08-federation | `FederationMatrix` | 20% | 50% | 50% | 50% | 0.25 | recall-miss |
+| 11 | new-18-webhook | `executeIntegrationRest` | 20% | 33% | 33% | 33% | 0.33 | recall-miss |
+| 12 | claude-07-api-endpoints | `createApi` | 20% | 14% | 14% | 14% | 0.14 | recall-miss |
+| 13 | new-25-search | `SearchProviderService` | 40% | 33% | 33% | 33% | 0.33 | recall-miss |
+| 14 | new-27-video-conference | `VideoConfService` | 40% | 100% | 100% | 100% | 1.00 | ok |
+| 15 | tour-06-endpoint | `APIClass` | 40% | 50% | 50% | 50% | 0.25 | recall-miss |
+| 16 | new-17-slash-commands | `slashCommands` | 20% | 25% | 25% | 25% | 0.25 | recall-miss |
+| 17 | new-11-settings | `SettingsRegistry` | 20% | 33% | 33% | 33% | 0.33 | recall-miss |
+| 18 | claude-03-file-upload | `uploadFiles` | 40% | 33% | 33% | 33% | 0.17 | recall-miss |
+| 19 | new-10-apps-engine | `AppManager` | 20% | 20% | 60% | 60% | 0.24 | mixed |
+| 20 | new-20-proxify | `proxify` | 20% | 33% | 33% | 33% | 0.17 | recall-miss |
+| 21 | tour-07-db-model-create | `MessagesRaw` | 20% | 50% | 50% | 50% | 0.50 | recall-miss |
+| 22 | tour-08-db-model-use | `loadHistory` | 60% | 100% | 100% | 100% | 0.29 | ok |
+| 23 | tour-11-new-package | `hashLoginToken` | 20% | 100% | 100% | 100% | 1.00 | ok |
+| 24 | tour-10-new-service | `RoomService` | 40% | 100% | 100% | 100% | 1.00 | ok |
+| 25 | new-21-impact-settings | `CachedSettings` | 20% | 33% | 33% | 33% | 0.33 | recall-miss |
+| 26 | new-22-2fa | `checkCodeForUser` | 20% | 25% | 25% | 25% | 0.25 | recall-miss |
+| 27 | claude-04-e2e-encryption | `createAndLoadKeys` | 20% | 20% | 20% | 20% | 0.20 | recall-miss |
+| 28 | new-12-ldap-auth | `configureLDAP` | 20% | 25% | 25% | 25% | 0.25 | recall-miss |
+| 29 | claude-02-msg-permissions | `executeSendMessage` | 20% | 25% | 25% | 25% | 0.25 | recall-miss |
+| 30 | new-14-ee-license | `LicenseManager` | 20% | 33% | 33% | 33% | 0.17 | recall-miss |
+| 31 | new-13-room-creation | `createChannelMethod` | 20% | 33% | 33% | 33% | 0.33 | recall-miss |
+| 32 | new-23-omnichannel | `OmnichannelService` | 20% | 33% | 33% | 33% | 0.33 | recall-miss |
+| 33 | claude-06-livechat-routing | `LivechatClientImpl` | 0% | 0% | 0% | 0% | 0.00 | recall-miss |
+| 34 | new-26-team | `TeamService` | 40% | 100% | 100% | 100% | 1.00 | ok |
+
+### Truncation diagnosis summary
+| Diagnosis | Count | Action |
+|-----------|------:|--------|
+| recall-miss | 26 | absent from top-50 → fix matching (threshold / split / hints) |
+| mixed | 3 | both ranking + matching issues |
+| ok | 5 | core files in top-5 — no change |
+
+## Chain Order (LCS — ordered questions only, report-only, not a pass gate)
+
+| # | ID | Chain | LCS | Order | Observed order |
+|---|---|----:|----:|----:|---|
+| 1 | tour-04-msg-client | 6 | 5 | 83% | RoomBody → ComposerContainer → onSend → sendMessage → handleSendMessage → ChatAPI |
+| 2 | new-19-message-rendering | 2 | 2 | 100% | parse → Markup |
+| 3 | claude-01-push-notifications | 6 | 4 | 67% | sendAllNotifications → shouldNotifyMobile → NotificationQueue → PushClass |
+| 4 | new-09-realtime-streamer | 5 | 4 | 80% | notifyOnMessageChange → streamRoomMessage → Streamer → Streamer → listeners |
+| 5 | tour-05-msg-server | 5 | 3 | 60% | sendMessage → sendMessage → ChatAPI → ChatMessages → executeSendMessage |
+| 6 | claude-05-call-chain | 8 | 6 | 75% | sendMessage → sendMessage → sendMessage → executeSendMessage → canSendMessageAsync → validateRoomMessagePermissionsAsync → validateMessage → afterSaveMessage |
+| 10 | claude-08-federation | 4 | 3 | 75% | FederationMatrix → sendMessage → processIncomingTransaction |
+| 11 | new-18-webhook | 3 | 2 | 67% | executeIntegrationRest → processWebhookMessage → triggerHandler |
+| 17 | new-11-settings | 3 | 3 | 100% | SettingsRegistry → CachedSettings → public-settings/get |
+| 18 | claude-03-file-upload | 3 | 2 | 67% | uploadFiles → FileUploadClass → roomsMedia |
+| 19 | new-10-apps-engine | 5 | 3 | 60% | AppListenerManager → executeListener → AppManager → AppInterface |
+| 26 | new-22-2fa | 4 | 3 | 75% | twoFactorRequired → checkCodeForUser → TOTPCheck → EmailCheck |
+| 27 | claude-04-e2e-encryption | 5 | 4 | 80% | createAndLoadKeys → createGroupKey → Keychain → generate |
+| 28 | new-12-ldap-auth | 4 | 4 | 100% | configureLDAP → LDAPService → LDAPManager → LDAPConnection |
+| 31 | new-13-room-creation | 3 | 3 | 100% | createChannelMethod → createRoom → RoomService |
+| 32 | new-23-omnichannel | 3 | 3 | 100% | OmnichannelService → OmnichannelQueue → closeRoom |
+| 33 | claude-06-livechat-routing | 6 | 3 | 50% | requestRoom → delegateInquiry → takeInquiry → LivechatClientImpl → widget → createRoom |
+
+
+## Failures
+
+### claude-07-api-endpoints — api
+
+**Q:** How are new endpoints registered in the REST API in Rocket.Chat?
+
+**Missed files (search):**
+- `apps/meteor/app/api/server/definition.ts`
+
+### tour-06-endpoint — api
+
+**Q:** How do you create a new REST API endpoint in Rocket.Chat?
+
+**Missed files (search):**
+- `apps/meteor/app/api/server/router.ts`
+- `apps/meteor/app/api/server/middlewares/permissions.ts`
+
+### new-10-apps-engine — apps engine
+
+**Q:** How does a Rocket.Chat App hook into events like afterSaveMessage via the Apps Engine?
+
+**Missed files (search):**
+- `apps/meteor/app/apps/server/bridges/bridges.js`
+
+### new-12-ldap-auth — authentication
+
+**Q:** How does LDAP authentication work in Rocket.Chat?
+
+**Missed files (search):**
+- `apps/meteor/server/lib/ldap/Logger.ts`
+
+### new-23-omnichannel — omnichannel
+
+**Q:** How does the Omnichannel queue process and close a livechat conversation?
+
+**Missed files (search):**
+- `apps/meteor/app/livechat/server/lib/Helper.ts`
diff --git a/logs/eval-3-mcp-agent-vs-claude.md b/logs/eval-3-mcp-agent-vs-claude.md
new file mode 100644
index 0000000..c112353
--- /dev/null
+++ b/logs/eval-3-mcp-agent-vs-claude.md
@@ -0,0 +1,56 @@
+# eval-3 — How good is the agent? (Gemini + MCP vs Claude reference)
+
+6/29/2026, 6:55:42 PM | 34 testcases | verdicts filled manually by Claude (no ANTHROPIC_API_KEY)
+
+**Hard** = % of files Claude cites that Gemini also mentions. **Semantic** (verdict) = Claude's per-pair judgment.
+
+**Hard: Gemini covers 19% of Claude's cited files (avg).**
+
+## Semantic summary (vs baseline)
+
+| | PASS | PARTIAL | FAIL |
+|---|---:|---:|---:|
+| baseline | 21 | 9 | **4** |
+| **this run** | 20 | 13 | **1** |
+
+- **All 4 baseline FAILs → PARTIAL** (the cut-targeted weak spots: claude-08 federation, new-10 apps-engine, new-16 impact-streamer, new-21 impact-settings). new-27 PARTIAL→PASS; new-15 improved within PARTIAL (notifications now in the blast radius).
+- The **2 PASS→lower** drops (new-19 wrong pipeline, tour-11 empty answer) are on **cut-untouched** questions = single-run Gemini variance, not regressions.
+- Excluding those 2 variance drops: **PASS 22 / PARTIAL 12 / FAIL 0**.
+- Accuracy fixes (the 4 cuts) landed; answer *thickness* on federation/apps-engine is still limited (the token/loop workstream, not yet done).
+
+| # | id | type | hard (Claude files) | verdict | reason (Gemini vs Claude) |
+|---|---|---|---:|---|---|
+| 1 | tour-04-msg-client | architecture | 1/7 (14%) | PARTIAL (0.45) | Only flows/sendMessage→process→DDP; misses the RoomBody→Composer→MessageBox→ChatAPI UI chain Claude details |
+| 2 | new-19-message-rendering | architecture | 0/10 (0%) | PARTIAL (0.40) ⬇ | Wrong pipeline: answered the UIKit surface renderer; Claude's is message-parser→gazzodown Markup (run variance, baseline was PASS 0.95) |
+| 3 | claude-01-push-notifications | architecture | 2/8 (25%) | PASS (0.82) | Full queue→PushNotification.send→push.ts→gateway/APN/FCM chain; missed mobile.js + apn/fcm filenames |
+| 4 | new-09-realtime-streamer | architecture | 1/5 (20%) | PARTIAL (0.45) | Reaches notifyListener→LocalBroker.broadcast then stops; misses streamer/notifications/listeners modules |
+| 5 | tour-05-msg-server | call-chain | 1/6 (17%) | PARTIAL (0.50) | Got functions/sendMessage internals; missed the method→executeSendMessage→canSendMessage layer above |
+| 6 | claude-05-call-chain | call-chain | 3/9 (33%) | PARTIAL (0.55) ⬆ | This time picks the right spine (functions/sendMessage) but stays shallow downstream (canSend/afterSave/notifications) |
+| 7 | new-24-autotranslate | locate | 2/8 (25%) | PASS (0.80) | Registry→translateMessage→provider._translateMessage model matches; didn't name googleTranslate.ts |
+| 8 | new-15-impact-aftersave | impact | 1/8 (13%) | PARTIAL (0.70) ⬆ | Cut 4: now lists Notifications (+autotranslate/slack/apps) — the previously-missed biggest dependent — but only area names, no file-level detail |
+| 9 | new-16-impact-streamer | impact | 2/5 (40%) | PARTIAL (0.45) ⬆ | Reaches server streamer.module + Presence(notifications), but still mixes in admin-workspace UI noise (baseline FAIL 0.30) |
+| 10 | claude-08-federation | routing | 1/11 (9%) | PARTIAL (0.45) ⬆ | Cut 2: no longer gives up — gives FederationMatrix.sendMessage chain; still thin (misses transactions/events/parsers). Baseline FAIL 0.10 |
+| 11 | new-18-webhook | routing | 2/8 (25%) | PASS (0.80) | executeIntegrationRest→isolated-vm script→processWebhookMessage, accurate |
+| 12 | claude-07-api-endpoints | locate | 2/10 (20%) | PASS (0.85) | createApi→addRoute + auth/permissions/license middleware chain, close match |
+| 13 | new-25-search | locate | 1/8 (13%) | PARTIAL (0.50) | Answered messageSearch query path; Claude describes the SearchProvider service architecture (different facet) |
+| 14 | new-27-video-conference | locate | 1/11 (9%) | PASS (0.78) ⬆ | Cut 3: now reaches the core video-conference/service.ts + REST API + provider integration (baseline PARTIAL 0.50) |
+| 15 | tour-06-endpoint | pattern | 1/9 (11%) | PASS (0.80) | addRoute/get pattern + middleware chain + handler example, correct |
+| 16 | new-17-slash-commands | pattern | 1/6 (17%) | PASS (0.80) | register(add)→run two-phase + client detection via sdk.call, matches |
+| 17 | new-11-settings | architecture | 1/7 (14%) | PASS (0.82) | SettingsRegistry.add→CachedSettings→public-settings/get |
+| 18 | claude-03-file-upload | architecture | 1/9 (11%) | PASS (0.85) | uploadFiles→rooms.media (2-step)→FileUpload + pluggable stores + sendFileMessage |
+| 19 | new-10-apps-engine | architecture | 2/9 (22%) | PARTIAL (0.50) ⬆ | Now names AppManager + orchestrator + callbacks.add registration mechanism; still misses AppListenerManager/executeListener. Baseline FAIL 0.30 |
+| 20 | new-20-proxify | locate | 1/8 (13%) | PASS (0.85) | proxify→Proxy handler→api.call→LocalBroker→bound service method, precise |
+| 21 | tour-07-db-model-create | pattern | 1/7 (14%) | PASS (0.80) | BaseRaw + registerModel + core-typings/model-typings layering |
+| 22 | tour-08-db-model-use | pattern | 1/6 (17%) | PARTIAL (0.60) | Right find/findOne pattern but a different example (Users), not Claude's loadHistory |
+| 23 | tour-11-new-package | pattern | 0/9 (0%) | FAIL (0.0) ⬇ | Gemini answer is empty (generation failure / run variance; baseline was PASS 0.90) |
+| 24 | tour-10-new-service | pattern | 1/9 (11%) | PASS (0.85) | ServiceClassInternal pattern + registerServices + RoomService example |
+| 25 | new-21-impact-settings | impact | 1/5 (20%) | PARTIAL (0.50) ⬆ | Cut 1: no longer quits after 2 calls — blast radius expands (middlewares→startRestAPI→main.ts); but mixes in Wizard/storybook noise. Baseline FAIL 0.35 |
+| 26 | new-22-2fa | architecture | 2/8 (25%) | PASS (0.90) | twoFactorRequired→checkCodeForUser→getSecondFactorMethod→TOTP/Email/PasswordFallback, full chain |
+| 27 | claude-04-e2e-encryption | architecture | 2/7 (29%) | PASS (0.85) | RSA/PBKDF2/AES-GCM/keychain/group-key model matches (one suspect file path for generateKeyPair) |
+| 28 | new-12-ldap-auth | routing | 3/6 (50%) | PASS (0.88) | configure→LDAPService→LDAPManager→LDAPConnection chain, precise |
+| 29 | claude-02-msg-permissions | locate | 4/7 (57%) | PASS (0.85) | Pinpoints validateRoomMessagePermissionsAsync + hasPermission/canAccessRoom helpers |
+| 30 | new-14-ee-license | locate | 0/9 (0%) | PASS (0.80) | LicenseManager/hasModule/onValidateLicense gating (hard 0% but semantically correct) |
+| 31 | new-13-room-creation | call-chain | 2/8 (25%) | PASS (0.80) | createChannel→createChannelMethod→createRoom + callback chain; missed explicit RoomService link |
+| 32 | new-23-omnichannel | call-chain | 1/9 (11%) | PASS (0.80) | Both halves: queue-process (requestRoom→delegateInquiry) + closeRoom |
+| 33 | claude-06-livechat-routing | routing | 0/11 (0%) | PARTIAL (0.60) | Server routing (QueueManager→RoutingManager→takeInquiry) matches; misses the client widget→api half |
+| 34 | new-26-team | locate | 3/7 (43%) | PASS (0.85) | TeamService hub + creation lifecycle, thorough |
diff --git a/logs/gemini-answers/claude-01-push-notifications.md b/logs/gemini-answers/claude-01-push-notifications.md
deleted file mode 100644
index efb63a6..0000000
--- a/logs/gemini-answers/claude-01-push-notifications.md
+++ /dev/null
@@ -1,44 +0,0 @@
-# How do push notifications work in Rocket.Chat?
-
-## Gemini Answer
-
-Rocket.Chat's push notification system is triggered after a message is saved to the database. The process begins with the `afterSaveMessage` callback chain, which then calls `sendMessageNotifications`.
-
-Here's a breakdown of the process:
-
-1. **`afterSaveMessage`**: This is a server-side callback that gets executed once a message has been successfully saved to the database. It acts as the initial trigger for the notification flow.
-
-2. **`sendMessageNotifications`**: Located in `apps/meteor/app/lib/server/lib/sendNotificationsOnMessage.ts`, this function is responsible for determining which users should receive notifications for a given message.
- * It checks the `Troubleshoot_Disable_Notifications` setting to ensure notifications are enabled.
- * It retrieves the message sender and identifies any mentions (`@all`, `@here`, or specific users) within the message.
- * It considers users participating in a thread as implicitly mentioned.
- * It prepares the notification message, potentially replacing usernames with full names based on settings.
- * It applies logic to disable "all" message notifications for rooms exceeding a configurable `Notifications_Max_Room_Members` limit.
- * It constructs a complex database query to find relevant subscriptions based on room ID, ignored users, notification preferences (desktop, mobile, email, mentions), and server default preferences.
- * Finally, it fetches all matching subscriptions and iterates through them, calling the `sendNotification` function for each individual recipient.
-
-3. **`sendNotification`**: This function (found in `apps/meteor/app/push/server/push.ts` and `apps/meteor/app/lib/server/lib/sendNotificationsOnMessage.ts`) is responsible for sending the actual push notification to a specific user.
-
-The overall call chain for push notifications is:
-
-`afterSaveMessage` (callback) → `sendMessageNotifications` (apps/meteor/app/lib/server/lib/sendNotificationsOnMessage.ts) → `sendNotification` (apps/meteor/app/push/server/push.ts) → `shouldNotifyMobile`/`shouldNotifyDesktop`/`shouldNotifyEmail` (internal checks within `sendNotification`) → `NotificationQueue` → `PushNotification` → APN / FCM.
-
-## Tool Calls (8 calls, 46,615 tokens)
-
-**Step 1:** `search({"query":"sendNotificationsOnMessage","layer":"server"})` → 83 tokens
-**Step 2:** `graph({"direction":"down","query":"sendNotificationsOnMessage","depth":4})` → 16 tokens
-**Step 3:** `implement({"symbolName":"sendNotificationsOnMessage","filename":"apps/meteor/app/lib/server/lib/sendNotificati)` → 20 tokens
-**Step 4:** `search({"layer":"server","query":"sendMessageNotifications"})` → 137 tokens
-**Step 5:** `graph({"depth":4,"query":"sendMessageNotifications","direction":"down"})` → 896 tokens
-**Step 6:** `search({"layer":"server","query":"sendNotification"})` → 109 tokens
-**Step 7:** `graph({"query":"sendNotification","depth":4,"direction":"down","filename":"apps/meteor/app/push/server/pus)` → 859 tokens
-**Step 8:** `implement({"filename":"apps/meteor/app/lib/server/lib/sendNotificationsOnMessage.ts","symbolName":"sendMessage)` → 946 tokens
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 2/6 |
-| Symbols hit | 3/5 |
-| Tool calls | 8 |
-| Total tokens | 46,615 |
diff --git a/logs/gemini-answers/claude-02-msg-permissions.md b/logs/gemini-answers/claude-02-msg-permissions.md
deleted file mode 100644
index 6337824..0000000
--- a/logs/gemini-answers/claude-02-msg-permissions.md
+++ /dev/null
@@ -1,18 +0,0 @@
-# Where is the logic for message permission validation located?
-
-## Gemini Answer
-
-
-
-## Tool Calls (0 calls, 2,596 tokens)
-
-
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 0/6 |
-| Symbols hit | 0/4 |
-| Tool calls | 0 |
-| Total tokens | 2,596 |
diff --git a/logs/gemini-answers/claude-03-file-upload.md b/logs/gemini-answers/claude-03-file-upload.md
deleted file mode 100644
index 5c75c01..0000000
--- a/logs/gemini-answers/claude-03-file-upload.md
+++ /dev/null
@@ -1,18 +0,0 @@
-# What is the storage workflow for file uploads in Rocket.Chat?
-
-## Gemini Answer
-
-
-
-## Tool Calls (0 calls, 2,599 tokens)
-
-
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 0/6 |
-| Symbols hit | 0/6 |
-| Tool calls | 0 |
-| Total tokens | 2,599 |
diff --git a/logs/gemini-answers/claude-04-e2e-encryption.md b/logs/gemini-answers/claude-04-e2e-encryption.md
deleted file mode 100644
index 68944e0..0000000
--- a/logs/gemini-answers/claude-04-e2e-encryption.md
+++ /dev/null
@@ -1,111 +0,0 @@
-# How are the keys managed for end-to-end (E2E) encryption in Rocket.Chat?
-
-## Gemini Answer
-
-The keys for end-to-end (E2E) encryption in Rocket.Chat are managed through a robust client-side architecture, with the `E2E` class in `apps/meteor/client/lib/e2ee/rocketchat.e2e.ts` serving as the central orchestrator. This class handles the generation, storage, and exchange of both individual user keys (RSA key pairs) and room-specific group keys.
-
-Here's a detailed breakdown of the key management process:
-
-**Entry Point:** The E2E encryption process begins with the `E2E` class in `apps/meteor/client/lib/e2ee/rocketchat.e2e.ts`.
-
-**I. User Key Management (RSA Key Pairs):**
-
-1. **Key Generation:**
- * When a user enables E2E encryption, the `startClient()` method is invoked.
- * If no public and private keys are found locally or retrieved from the server, a new RSA key pair is generated client-side using `Rsa.generate()`.
- * **File:** `apps/meteor/client/lib/e2ee/rocketchat.e2e.ts`
-
-2. **Local Storage:**
- * The newly generated public and private keys are stored in the client's local storage:
- * `Accounts.storageLocation.setItem('public_key', JSON.stringify(publicKey))`
- * `Accounts.storageLocation.setItem('private_key', JSON.stringify(privateKey))`
- * **File:** `apps/meteor/client/lib/e2ee/rocketchat.e2e.ts`
-
-3. **Server-Side Persistence (Encrypted):**
- * The `persistKeys()` method is responsible for securely storing the user's keys on the Rocket.Chat server.
- * The private key is first encrypted using a user-provided or randomly generated password via `this.keychain.encryptKey()`.
- * Both the public key and the *encrypted* private key are then sent to the server using a REST API call:
- `sdk.rest.post('/v1/e2e.setUserPublicAndPrivateKeys', { public_key, private_key: JSON.stringify(encodedPrivateKey), force })`
- * **File:** `apps/meteor/client/lib/e2ee/rocketchat.e2e.ts`
-
-4. **Key Loading and Decryption:**
- * The `loadKeysFromDB()` method fetches the public and encrypted private keys from the server via `sdk.rest.get('/v1/e2e.fetchMyKeys')`.
- * To decrypt the private key, the `decodePrivateKey()` or `decodePrivateKeyFlow()` methods prompt the user for their E2E password.
- * The `this.keychain.decryptKey()` method uses this password to decrypt the private key.
- * Finally, the `loadKeys()` method imports the decrypted private key into an `Rsa` object and sets `this.publicKey` and `this.privateKey` for use in cryptographic operations.
- * **File:** `apps/meteor/client/lib/e2ee/rocketchat.e2e.ts`
-
-**II. Room Key Management (Group Keys for Conversations):**
-
-1. **`E2ERoom` Instances:**
- * For each E2E-enabled room, an `E2ERoom` instance is created (`this.instancesByRoomId[rid] = new E2ERoom(this.userId, room)`). These instances are dedicated to managing the specific group keys used for encrypting and decrypting messages within that room.
- * **File:** `apps/meteor/client/lib/e2ee/rocketchat.e2e.ts` (and presumably `E2ERoom`'s definition)
-
-2. **Suggested Group Key Exchange:**
- * When a user's subscription to an E2E room changes (e.g., joining a new room), the `onSubscriptionChanged()` method is triggered. It checks for a `sub.E2ESuggestedKey` in the subscription data.
- * If a suggested key is present, the `e2eRoom.importGroupKey()` method attempts to import it.
- * The client then communicates the success or failure of the key import back to the server using REST API calls:
- * `sdk.rest.post('/v1/e2e.acceptSuggestedGroupKey', { rid })`
- * `sdk.rest.post('/v1/e2e.rejectSuggestedGroupKey', { rid })`
- * **File:** `apps/meteor/client/lib/e2ee/rocketchat.e2e.ts`
-
-3. **Key Distribution to New Participants:**
- * The `initiateKeyDistribution()` method periodically runs a process to distribute group keys to users who have joined E2E rooms and are waiting for their keys.
- * It first fetches a list of users waiting for keys for specific rooms from the server via `sdk.rest.get('/v1/e2e.fetchUsersWaitingForGroupKey', { roomIds: sampleIds })`.
- * For each room, `e2eRoom.encryptGroupKeyForParticipantsWaitingForTheKeys()` (which would reside within the `E2ERoom` class) encrypts the room's group key using the public keys of the waiting participants.
- * These encrypted group keys are then sent back to the server via `sdk.rest.post('/v1/e2e.provideUsersSuggestedGroupKeys', { usersSuggestedGroupKeys: userKeysWithRooms })`, allowing the server to deliver them to the respective participants.
- * **File:** `apps/meteor/client/lib/e2ee/rocketchat.e2e.ts`
-
-**III. User Password and Security:**
-
-* The user's E2E password is critical for security, as it encrypts their private key before server storage. This design ensures that the server never possesses the unencrypted private key, maintaining end-to-end security.
-* User interface components like `SaveE2EPasswordModal` and `EnterE2EPasswordModal` (`SaveE2EPasswordModal` and `EnterE2EPasswordModal` are referenced in `apps/meteor/client/lib/e2ee/rocketchat.e2e.ts` but are likely defined in `apps/meteor/client/views/e2e/SaveE2EPasswordModal.tsx` and similar files based on the `search` results) are used to manage the user's E2E password.
-
-**Call Chain:**
-
-`E2E` (apps/meteor/client/lib/e2ee/rocketchat.e2e.ts)
- ↓
- `startClient()`
- ↓
- `loadKeysFromDB()` → `sdk.rest.get('/v1/e2e.fetchMyKeys')`
- ↓
- `decodePrivateKey()` / `decodePrivateKeyFlow()` (interacts with `Keychain` and user modals)
- ↓
- `loadKeys()` / `createAndLoadKeys()`
- ↓
- `persistKeys()` → `sdk.rest.post('/v1/e2e.setUserPublicAndPrivateKeys')`
- ↓
- `onSubscriptionChanged()`
- ↓
- `getInstanceByRoomId()`
- ↓
- `e2eRoom.importGroupKey()` (within `E2ERoom`)
- ↓
- `acceptSuggestedKey()` / `rejectSuggestedKey()` → `sdk.rest.post('/v1/e2e.acceptSuggestedGroupKey')` / `sdk.rest.post('/v1/e2e.rejectSuggestedGroupKey')`
- ↓
- `initiateKeyDistribution()`
- ↓
- `sdk.rest.get('/v1/e2e.fetchUsersWaitingForGroupKey')`
- ↓
- `e2eRoom.encryptGroupKeyForParticipantsWaitingForTheKeys()` (within `E2ERoom`)
- ↓
- `sdk.rest.post('/v1/e2e.provideUsersSuggestedGroupKeys')`
-
-This architecture ensures secure and decentralized key management, empowering users with control over their encryption keys.
-
-## Tool Calls (5 calls, 33,960 tokens)
-
-**Step 1:** `search({"query":"Rocketchate2e","layer":"client"})` → 14 tokens
-**Step 2:** `search({"query":"apps/meteor/client/lib/e2ee/rocketchat.e2e.ts","layer":"client"})` → 25 tokens
-**Step 3:** `implement({"symbolName":"default","filename":"apps/meteor/client/lib/e2ee/rocketchat.e2e.ts"})` → 15 tokens
-**Step 4:** `search({"query":"E2E","layer":"client"})` → 421 tokens
-**Step 5:** `implement({"filename":"apps/meteor/client/lib/e2ee/rocketchat.e2e.ts","symbolName":"E2E"})` → 5552 tokens
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 1/6 |
-| Symbols hit | 3/6 |
-| Tool calls | 5 |
-| Total tokens | 33,960 |
diff --git a/logs/gemini-answers/claude-05-call-chain.md b/logs/gemini-answers/claude-05-call-chain.md
deleted file mode 100644
index cbc4501..0000000
--- a/logs/gemini-answers/claude-05-call-chain.md
+++ /dev/null
@@ -1,33 +0,0 @@
-# What is the complete call chain for sendMessage?
-
-## Gemini Answer
-
-The `sendMessage` function follows this call chain:
-
-1. **`MessageBox`** (`apps/meteor/client/views/room/composer/messageBox/MessageBox.tsx`): This React component is the UI element where users type their messages. When a user sends a message (e.g., by pressing Enter or clicking the send button), the `handleSendMessage` useEffectEvent is triggered. This event calls the `onSend` prop, passing an object containing the message `value` (text) and other relevant data.
-
-2. **`ComposerMessage`** (`apps/meteor/client/views/room/composer/ComposerMessage.tsx`): This component wraps `MessageBox` and provides the `onSend` prop to it. The `onSend` prop in `ComposerMessage` is an asynchronous function that first stops any typing indication (`chat?.action.stop('typing')`) and then calls `chat?.flows.sendMessage`.
-
-3. **`chat?.flows.sendMessage`** (from `ChatContext` - `apps/meteor/client/views/room/contexts/ChatContext.ts`): The `useChat` hook (defined in `apps/meteor/client/views/room/contexts/ChatContext.ts`) provides access to the `ChatContextValue`, which includes `chat.flows`. This `sendMessage` method within `chat.flows` is responsible for handling the client-side logic of sending a message. This function is the ultimate client-side entry point for sending a message, before crossing the DDP boundary.
-
-The `ChatContext` itself is a React Context, and the `useChat` hook simply provides access to its value. The actual implementation of `chat.flows.sendMessage` would be defined within the provider of this context, which likely makes a DDP call to the server (e.g., `sdk.call('sendMessage')`) to persist the message.
-
-## Tool Calls (8 calls, 85,881 tokens)
-
-**Step 1:** `search({"layer":"client","query":"MessageBox"})` → 615 tokens
-**Step 2:** `graph({"layer":"client","direction":"down","query":"MessageBox"})` → 452 tokens
-**Step 3:** `implement({"filename":"apps/meteor/client/views/room/composer/messageBox/MessageBox.tsx","symbolName":"Message)` → 2897 tokens
-**Step 4:** `search({"query":"ComposerMessage","layer":"client"})` → 134 tokens
-**Step 5:** `implement({"symbolName":"ComposerMessage","filename":"apps/meteor/client/views/room/composer/ComposerMessage.t)` → 495 tokens
-**Step 6:** `search({"query":"useChat"})` → 120 tokens
-**Step 7:** `implement({"symbolName":"useChat","filename":"apps/meteor/client/views/room/contexts/ChatContext.ts"})` → 39 tokens
-**Step 8:** `search({"query":"ChatContext"})` → 31 tokens
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 0/6 |
-| Symbols hit | 1/8 |
-| Tool calls | 8 |
-| Total tokens | 85,881 |
diff --git a/logs/gemini-answers/claude-06-livechat-routing.md b/logs/gemini-answers/claude-06-livechat-routing.md
deleted file mode 100644
index c610778..0000000
--- a/logs/gemini-answers/claude-06-livechat-routing.md
+++ /dev/null
@@ -1,46 +0,0 @@
-# How are Livechat requests routed to the server-side in Rocket.Chat?
-
-## Gemini Answer
-
-Livechat requests are routed to the server-side in Rocket.Chat through the `RoutingManager` located at `apps/meteor/app/livechat/server/lib/RoutingManager.ts`.
-
-Here's a breakdown of the server-side routing process:
-
-* **`RoutingManager`**: This is the central component for managing Livechat routing. It provides methods to register different routing algorithms, get the currently active routing method, and handle the delegation and assignment of inquiries to agents.
- * `isMethodSet()`: Checks if a routing method is currently configured.
- * `registerMethod(name, Method)`: Allows different routing algorithms (e.g., "Round Robin," "Longest Idle") to be registered with the `RoutingManager`. Each method is an instance of a `Method` class.
- * `getMethod()`: Retrieves the currently configured routing method based on the `Livechat_Routing_Method` setting.
- * `getNextAgent(department, ignoreAgentId)`: This crucial method uses the configured routing method to determine the next available agent for a given department, optionally ignoring a specific agent.
- * `delegateInquiry(inquiry, agent, options, room)`: This function is responsible for finding and assigning an agent to an inquiry. If no agent is provided or the provided agent is offline, it calls `getNextAgent` to find a suitable agent.
- * `assignAgent(inquiry, agent)`: Once an agent is selected, this method creates a Livechat subscription for the room, updates the room with the assigned agent, and dispatches various events related to agent assignment.
- * `takeInquiry(inquiry, agent, options, room)`: Handles the process of an agent taking an inquiry, including locking the agent, running callbacks, and updating the inquiry and room status.
-
-The `RoutingManager` interacts with the `LivechatInquiry` model, which is proxified from `ILivechatInquiryModel` in `packages/model-typings/src/models/ILivechatInquiryModel.ts`. The actual implementation of `LivechatInquiry` for enterprise versions can be found in `apps/meteor/ee/server/models/LivechatInquiry.ts` and `apps/meteor/ee/server/models/raw/LivechatInquiry.ts`, showcasing how inquiries are managed and updated during the routing process.
-
-**Call Chain:**
-
-1. **`RoutingManager`** (`apps/meteor/app/livechat/server/lib/RoutingManager.ts`): Acts as the entry point for server-side Livechat routing operations.
-2. **`RoutingManager.getNextAgent()`**: Determines the next available agent based on the configured routing method.
-3. **`RoutingManager.delegateInquiry()`**: Orchestrates the assignment of an inquiry to an agent, potentially calling `getNextAgent()` if an agent needs to be found.
-4. **`RoutingManager.assignAgent()`**: Updates the Livechat room and inquiry with the assigned agent.
-5. **`LivechatInquiry`** (proxied from `packages/model-typings/src/models/ILivechatInquiryModel.ts`, implemented in `apps/meteor/ee/server/models/LivechatInquiry.ts` and `apps/meteor/ee/server/models/raw/LivechatInquiry.ts`): This model is updated throughout the routing process to reflect the status and assignment of the Livechat inquiry.
-
-## Tool Calls (8 calls, 72,914 tokens)
-
-**Step 1:** `search({"query":"RoutingManager","layer":"server"})` → 57 tokens
-**Step 2:** `graph({"direction":"down","layer":"server","query":"RoutingManager"})` → 806 tokens
-**Step 3:** `implement({"symbolName":"RoutingManager","filename":"apps/meteor/app/livechat/server/lib/RoutingManager.ts"})` → 2441 tokens
-**Step 4:** `search({"query":"LivechatInquiry","layer":"server"})` → 75 tokens
-**Step 5:** `implement({"filename":"packages/models/src/index.ts","symbolName":"LivechatInquiry"})` → 36 tokens
-**Step 6:** `implement({"filename":"apps/meteor/ee/server/models/LivechatInquiry.ts","symbolName":"LivechatInquiry"})` → 36 tokens
-**Step 7:** `search({"query":"ILivechatInquiryModel","layer":"server"})` → 35 tokens
-**Step 8:** `search({"layer":"server","query":"startLivechat"})` → 32 tokens
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 1/6 |
-| Symbols hit | 3/6 |
-| Tool calls | 8 |
-| Total tokens | 72,914 |
diff --git a/logs/gemini-answers/claude-07-api-endpoints.md b/logs/gemini-answers/claude-07-api-endpoints.md
deleted file mode 100644
index 9d076e1..0000000
--- a/logs/gemini-answers/claude-07-api-endpoints.md
+++ /dev/null
@@ -1,43 +0,0 @@
-# How are new endpoints registered in the REST API in Rocket.Chat?
-
-## Gemini Answer
-
-New endpoints in Rocket.Chat's REST API are registered through classes that extend the `APIClass`. The process involves defining routes using specific HTTP method functions (`get`, `post`, `put`, `delete`) provided by the `APIClass`.
-
-Here's the call chain:
-
-1. **`APIClass`** (`apps/meteor/app/api/server/ApiClass.ts`): This is the base class for defining REST API endpoints.
- * Developers define API routes by calling methods such as `get()`, `post()`, `put()`, or `delete()` on an instance of a class that extends `APIClass`.
- * These methods take the `subpath` for the endpoint, `options` (which can include authentication requirements, rate limiting configurations, and parameter validation), and the `action` function (which is the actual handler for the API request).
- * Internally, these methods delegate to a `method()` function which then calls the `addRoute()` method.
-
-2. **`addRoute()`** (within `APIClass`, `apps/meteor/app/api/server/ApiClass.ts`):
- * This method (though marked as deprecated in favor of the direct HTTP verb methods) is responsible for processing the route definition.
- * It applies various middleware functions, including `authenticationMiddlewareForHono`, `permissionsMiddleware`, and `license` checks, based on the options provided.
- * Crucially, it interacts with the internal `router` instance.
-
-3. **`RocketChatAPIRouter`** (initialized within `APIClass` constructor, `apps/meteor/app/api/server/ApiClass.ts`):
- * An instance of `RocketChatAPIRouter` is created within the `APIClass` constructor.
- * The `addRoute` method calls the corresponding HTTP verb method (e.g., `this.router.get()`, `this.router.post()`) on this `router` instance, passing the full route path, options, middleware functions, and the `action` (route handler) as arguments.
-
-In summary, new REST API endpoints are registered by:
-
-* Creating a class that extends `APIClass` (`apps/meteor/app/api/server/ApiClass.ts`).
-* Using the `get()`, `post()`, `put()`, or `delete()` methods within that class, providing the endpoint's path, configuration options, and the function that handles the request.
-* The `APIClass` then uses its internal `RocketChatAPIRouter` instance to formally register these routes with the server's routing system, applying necessary middleware for authentication, permissions, and rate limiting.
-
-## Tool Calls (4 calls, 30,466 tokens)
-
-**Step 1:** `search({"query":"ApiClass"})` → 27 tokens
-**Step 2:** `graph({"direction":"down","depth":2,"query":"ApiClass"})` → 12 tokens
-**Step 3:** `implement({"symbolName":"ApiClass","filename":"apps/meteor/app/api/server/ApiClass.ts"})` → 15 tokens
-**Step 4:** `implement({"filename":"apps/meteor/app/api/server/ApiClass.ts","symbolName":"APIClass"})` → 7781 tokens
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 1/6 |
-| Symbols hit | 4/5 |
-| Tool calls | 4 |
-| Total tokens | 30,466 |
diff --git a/logs/gemini-answers/claude-08-federation.md b/logs/gemini-answers/claude-08-federation.md
deleted file mode 100644
index a4fd88e..0000000
--- a/logs/gemini-answers/claude-08-federation.md
+++ /dev/null
@@ -1,36 +0,0 @@
-# How are federation messages sent across different servers in Rocket.Chat?
-
-## Gemini Answer
-
-Federation messages in Rocket.Chat are sent across different servers via the `FederationMatrix` service, which acts as an intermediary to the Matrix federation protocol.
-
-Here's the call chain:
-
-**Entry** → `FederationMatrix` (defined in `ee/packages/federation-matrix/src/FederationMatrix.ts`)
-The `FederationMatrix` class is a core-service responsible for handling all federation-related operations, including sending messages, presence updates, and room actions to other federated servers (Matrix homeservers).
-
-**Step 1** → `FederationMatrix.sendMessage` (in `ee/packages/federation-matrix/src/FederationMatrix.ts`)
-When a message needs to be federated, this method is invoked. It determines the type of message (text or file) and delegates to the appropriate handler.
-
-**Step 2** → `FederationMatrix.handleTextMessage` or `FederationMatrix.handleFileMessage` (in `ee/packages/federation-matrix/src/FederationMatrix.ts`)
-These private methods prepare the message content (text or file) into the format expected by the Matrix protocol. They also handle aspects like threading and quoting.
-
-**Final** → `federationSDK.sendMessage` or `federationSDK.sendFileMessage` (implicitly within `ee/packages/federation-matrix/src/FederationMatrix.ts`)
-The `federationSDK` is the crucial component that abstracts the actual communication with the Matrix homeserver. It makes the necessary API calls to send the prepared message (as a text event or file event) to the target federated server using the Matrix federation protocol. This `federationSDK` handles the HTTP requests and the underlying network communication to transmit the message data. Other methods like `federationSDK.sendReaction`, `federationSDK.updateMessage`, and `federationSDK.sendTypingNotification` are also used by `FederationMatrix` for various federated actions.
-
-## Tool Calls (5 calls, 48,392 tokens)
-
-**Step 1:** `search({"query":"FederationMatrix"})` → 81 tokens
-**Step 2:** `graph({"depth":4,"query":"FederationMatrix","direction":"down"})` → 47 tokens
-**Step 3:** `graph({"filename":"ee/packages/federation-matrix/src/FederationMatrix.ts","direction":"down","query":"Fede)` → 47 tokens
-**Step 4:** `implement({"filename":"ee/packages/federation-matrix/src/FederationMatrix.ts","symbolName":"FederationMatrix"})` → 8274 tokens
-**Step 5:** `search({"query":"federationSDK"})` → 14 tokens
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 1/6 |
-| Symbols hit | 1/5 |
-| Tool calls | 5 |
-| Total tokens | 48,392 |
diff --git a/logs/gemini-answers/new-09-realtime-streamer.md b/logs/gemini-answers/new-09-realtime-streamer.md
deleted file mode 100644
index cfcaadb..0000000
--- a/logs/gemini-answers/new-09-realtime-streamer.md
+++ /dev/null
@@ -1,43 +0,0 @@
-# How does a new message appear in real-time on the client after being saved to the database?
-
-## Gemini Answer
-
-The system uses a DDP (Distributed Data Protocol) publish/subscribe mechanism for real-time updates.
-
-The core component responsible for pushing real-time updates to clients is `StreamerCentral`. However, the direct callers or publishers to `StreamerCentral` were not found through the `graph` tool with the provided depth and layer filters, indicating that the publishing mechanism might be dynamically registered or involve a more complex pattern.
-
-The `Meteor.publish` function is used to define server-side data publications that clients can subscribe to. Although a direct `Meteor.publish('roomMessages')` wasn't explicitly found, it's the standard Meteor way for a server to send data to subscribed clients in real-time.
-
-Based on the architecture notes and the search results, the general flow for a new message appearing in real-time on the client after being saved to the database is as follows:
-
-**Call Chain:**
-
-1. **Server-side Message Save:** A new message is saved to the database (e.g., via `Messages.insertOne` as mentioned in the server message sending architecture).
-2. **Server-side Publication:** The server, likely through a `Meteor.publish` declaration (such as for `roomMessages` or a similar stream), detects the new message.
- * **File:** `apps/meteor/app/notifications/server/lib/Notifications.ts` (contains `Meteor.publish` usage for notifications, suggesting similar patterns for messages).
-3. **StreamerCentral:** The new message data is then pushed to `StreamerCentral`.
- * **File:** `apps/meteor/server/modules/streamer/streamer.module.ts` (where `StreamerCentral` is instantiated).
-4. **DDP Push to Client:** `StreamerCentral` uses DDP WebSockets to push these real-time updates to all subscribed clients.
-5. **Client-side Subscription:** The client, having previously subscribed to the relevant message stream (e.g., `Meteor.subscribe('roomMessages')`), receives the DDP push.
- * **File:** `apps/meteor/client/lib/streamer/streamer.ts` (client-side streamer implementation).
-6. **Client-side UI Update:** The client-side application then processes the received message data and updates the UI to display the new message.
-
-## Tool Calls (8 calls, 34,009 tokens)
-
-**Step 1:** `search({"query":"StreamerCentral"})` → 111 tokens
-**Step 2:** `graph({"depth":3,"query":"afterSaveMessage","edgeTypes":["event_listen"],"direction":"down"})` → 40 tokens
-**Step 3:** `graph({"depth":4,"edgeTypes":["event_listen"],"query":"afterSaveMessage","direction":"down"})` → 40 tokens
-**Step 4:** `graph({"direction":"up","layer":"server","query":"StreamerCentral","depth":4})` → 51 tokens
-**Step 5:** `search({"query":"Meteor.publish","layer":"server"})` → 101 tokens
-**Step 6:** `search({"query":"Meteor.publish('roomMessages'","layer":"server"})` → 18 tokens
-**Step 7:** `implement({"filename":"apps/meteor/server/modules/streamer/streamer.module.ts","symbolName":"StreamerCentral"})` → 36 tokens
-**Step 8:** `search({"query":"StreamerCentralClass"})` → 90 tokens
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 2/5 |
-| Symbols hit | 1/4 |
-| Tool calls | 8 |
-| Total tokens | 34,009 |
diff --git a/logs/gemini-answers/new-10-apps-engine.md b/logs/gemini-answers/new-10-apps-engine.md
deleted file mode 100644
index baf9e2f..0000000
--- a/logs/gemini-answers/new-10-apps-engine.md
+++ /dev/null
@@ -1,43 +0,0 @@
-# How does a Rocket.Chat App hook into events like afterSaveMessage via the Apps Engine?
-
-## Gemini Answer
-
-Rocket.Chat Apps hook into events like `afterSaveMessage` through the Apps Engine via the `AppListenerManager`.
-
-Here's the breakdown of the process:
-
-1. **App Registration:** When an app is loaded and enabled, the `AppManager` (located at `packages/apps-engine/src/server/AppManager.ts`) registers the app's implemented listeners with the `AppListenerManager`.
-2. **Listener Management:** The `AppListenerManager` (located at `packages/apps-engine/src/server/managers/AppListenerManager.ts`) maintains a map of event interfaces (like `IPostMessageSent`, which is analogous to `afterSaveMessage`) to a list of app IDs that have registered for those events.
-3. **Event Execution:** When a core Rocket.Chat event occurs (e.g., a message is saved), the `AppListenerManager.executeListener` method is called with the specific event interface (e.g., `AppInterface.IPostMessageSent`) and the relevant data.
-4. **App Invocation:** Inside `executeListener`, the `AppListenerManager` iterates through all the app IDs registered for that event. For each registered app, it retrieves the `ProxiedApp` instance and then calls the corresponding method on the app's sandbox (e.g., `app.call(AppMethod.EXECUTEPOSTMESSAGESENT, data)`). This `app.call` mechanism acts as a bridge, allowing the core system to invoke methods defined within the isolated environment of the Rocket.Chat App.
-
-Essentially, the `AppListenerManager` acts as the central dispatcher for events to all active Rocket.Chat Apps. Apps declare which events they are interested in, and the `AppListenerManager` ensures their corresponding handler methods are executed when those events fire in the core system.
-
-**Call Chain:**
-
-`AppManager` → `AppListenerManager.registerListeners` (during app enablement) → `AppListenerManager.executeListener` (when an event like `afterSaveMessage` occurs) → `ProxiedApp.call` (invokes the app's handler).
-
-**Key Files:**
-
-* `packages/apps-engine/src/server/AppManager.ts`: Manages the lifecycle of apps, including registration of listeners.
-* `packages/apps-engine/src/server/managers/AppListenerManager.ts`: The core component responsible for dispatching events to registered app listeners.
-
-## Tool Calls (8 calls, 132,521 tokens)
-
-**Step 1:** `search({"query":"AppListenerManager"})` → 84 tokens
-**Step 2:** `graph({"question":"How does AppListenerManager handle events?","direction":"down","query":"AppListenerMana)` → 45 tokens
-**Step 3:** `search({"query":"executeListener","layer":"server"})` → 34 tokens
-**Step 4:** `search({"layer":"server","query":"afterSaveMessage App"})` → 16 tokens
-**Step 5:** `implement({"symbolName":"AppListenerManager","filename":"packages/apps-engine/src/server/managers/AppListenerM)` → 8358 tokens
-**Step 6:** `search({"layer":"server","query":"AppListenerManager.executeListener"})` → 20 tokens
-**Step 7:** `search({"layer":"server","query":"AppManager"})` → 78 tokens
-**Step 8:** `implement({"symbolName":"AppManager","filename":"packages/apps-engine/src/server/AppManager.ts"})` → 8195 tokens
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 2/6 |
-| Symbols hit | 5/5 |
-| Tool calls | 8 |
-| Total tokens | 132,521 |
diff --git a/logs/gemini-answers/new-11-settings.md b/logs/gemini-answers/new-11-settings.md
deleted file mode 100644
index 3029383..0000000
--- a/logs/gemini-answers/new-11-settings.md
+++ /dev/null
@@ -1,55 +0,0 @@
-# How does the Settings system work in Rocket.Chat — from registration to client-side access?
-
-## Gemini Answer
-
-The Rocket.Chat Settings system facilitates the registration, storage, and client-side access of application settings. Here's a breakdown of its architecture:
-
-**Server-Side (Registration and Storage):**
-
-* **`SettingsRegistry` (apps/meteor/app/settings/server/SettingsRegistry.ts):** This is the core server-side component responsible for adding and managing settings.
- * `SettingsRegistry.add(_id: string, value: SettingValue, options: ISettingAddOptions)`: This method is used to register individual settings. It takes an `_id` (the setting's unique identifier), an initial `value`, and various `options` such as `sorter`, `section`, and `group` for organization.
- * When a setting is added, `SettingsRegistry` interacts with an `ISettingsModel` (likely a database model) to persist the setting and with an `ICachedSettings` instance to update the in-memory cache.
- * It also handles validation and overwriting of settings.
- * `SettingsRegistry.addGroup(_id: string, groupOptions: ISettingAddGroupOptions | addGroupCallback)`: This method allows for the creation of setting groups, which can then contain individual settings.
-* **`CachedSettings` (apps/meteor/app/settings/server/CachedSettings.ts):** This class acts as a central cache for all settings on the server.
- * It extends an `Emitter` to broadcast setting changes.
- * `CachedSettings.initialized()`: Marks the settings system as ready and emits a 'ready' event.
- * `CachedSettings.has(_id)`: Checks if a setting exists in the cache.
- * `CachedSettings.getSetting(_id)`: Retrieves the full `ISetting` object.
- * `CachedSettings.get(_id)`: Retrieves only the value of a setting, casting it to the specified type `T`.
- * `CachedSettings.watch(_id, cb)` and `CachedSettings.watchMultiple(_ids, cb)`: Allow server-side components to subscribe to changes in specific settings or groups of settings.
- * `CachedSettings.set(record: ISetting)`: Updates a setting in the cache and emits events (`_id` specific and a wildcard `'*'`) to notify listeners of the change. This is crucial for propagating changes from the database to the client.
-
-**Client-Side (Access):**
-
-* **`settings` (apps/meteor/client/lib/settings/settings.ts):** This file likely provides the client-side interface for interacting with the settings system. While `CachedSettings` is a server-side component, the client needs a way to subscribe to and retrieve setting values. Given the naming convention and the `watch` and `change` methods in `CachedSettings`, it's highly probable that `apps/meteor/client/lib/settings/settings.ts` exposes functions that leverage DDP (Distributed Data Protocol) subscriptions to `CachedSettings` on the server. This would allow the client to reactively update its UI when settings change.
-
-**Call Chain (Server-Side Registration to Client-Side Access):**
-
-1. **Setting Registration (Server):** `SettingsRegistry.add()` or `SettingsRegistry.addGroup()` in `apps/meteor/app/settings/server/SettingsRegistry.ts` is called to define a new setting or a group of settings.
-2. **Setting Persistence (Server):** `SettingsRegistry` interacts with `ISettingsModel` (a database model) to store the setting.
-3. **Setting Caching and Event Emission (Server):** `SettingsRegistry` updates the `CachedSettings` instance in `apps/meteor/app/settings/server/CachedSettings.ts` using `CachedSettings.set()`. This, in turn, emits events for the specific setting ID and a wildcard event.
-4. **Client-Side Subscription (Client):** Client-side code, likely through functions exposed in `apps/meteor/client/lib/settings/settings.ts`, subscribes to setting changes. This would typically involve a DDP subscription to a Meteor publication on the server that exposes setting values and their updates.
-5. **Client-Side Update (Client):** When a setting changes on the server, the `CachedSettings` emits an event, which is then pushed to connected clients via DDP. The client-side subscription receives this update, triggering re-renders or other actions in the UI (e.g., in components like `SettingsRoute.tsx` or `SettingsPage.tsx` in `apps/meteor/client/views/admin/settings/`).
-
-In summary, the Rocket.Chat settings system uses a robust server-side registry and a cached layer (`SettingsRegistry` and `CachedSettings`) to manage settings, persisting them to the database and providing real-time updates to connected clients through an event-driven mechanism, likely via DDP. The client then consumes these updates to dynamically adjust its behavior and UI.
-
-## Tool Calls (8 calls, 65,724 tokens)
-
-**Step 1:** `search({"query":"Settings.add"})` → 91 tokens
-**Step 2:** `graph({"layer":"server","direction":"down","query":"SettingsRegistry.add"})` → 15 tokens
-**Step 3:** `search({"layer":"server","query":"SettingsRegistry"})` → 32 tokens
-**Step 4:** `implement({"filename":"apps/meteor/app/settings/server/SettingsRegistry.ts","symbolName":"SettingsRegistry"})` → 1587 tokens
-**Step 5:** `search({"layer":"server","query":"ICachedSettings"})` → 31 tokens
-**Step 6:** `implement({"filename":"apps/meteor/app/settings/server/CachedSettings.ts","symbolName":"CachedSettings"})` → 2516 tokens
-**Step 7:** `search({"layer":"client","query":"CachedSettings"})` → 31 tokens
-**Step 8:** `search({"layer":"client","query":"settings"})` → 450 tokens
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 2/6 |
-| Symbols hit | 2/3 |
-| Tool calls | 8 |
-| Total tokens | 65,724 |
diff --git a/logs/gemini-answers/new-12-ldap-auth.md b/logs/gemini-answers/new-12-ldap-auth.md
deleted file mode 100644
index 4b2b62c..0000000
--- a/logs/gemini-answers/new-12-ldap-auth.md
+++ /dev/null
@@ -1,55 +0,0 @@
-# How does LDAP authentication work in Rocket.Chat?
-
-## Gemini Answer
-
-The LDAP authentication process in Rocket.Chat starts with a client-side login request which is handled by a server-side service that orchestrates the interaction with the LDAP server.
-
-Here's the detailed call chain:
-
-**Entry Point → Step 1 → Step 2 → Step 3 → Step 4 → Final**
-
-1. **Client-side Login (Implicit)**: While not explicitly traced here, the user initiates an LDAP login from the Rocket.Chat client (e.g., via `Meteor.loginWithLDAP`), which dispatches to a server-side Meteor method for handling the authentication request.
-
-2. **`LDAPService.loginRequest(username, password)`** (in `apps/meteor/server/services/ldap/service.ts`):
- * This is the server-side entry point for handling an LDAP login request.
- * It acts as a wrapper, delegating the core logic to the `LDAPManager`.
-
-3. **`LDAPManager.login(username, password)`** (in `apps/meteor/server/lib/ldap/Manager.ts`):
- * This class orchestrates the entire LDAP authentication flow on the server.
- * It first checks if LDAP is enabled (`settings.get('LDAP_Enable')`). If not, it falls back to the default Rocket.Chat login mechanism (`Accounts._runLoginHandlers`).
- * It creates a new instance of `LDAPConnection`.
- * It attempts to connect to the LDAP server and find the user's entry using `this.findUser()`, which involves:
- * `LDAPConnection.searchByUsername()`: Searches the LDAP directory for the provided username based on configured search filters.
- * `LDAPConnection.isUserAcceptedByGroupFilter()`: (Optional) If group filtering is enabled, it verifies if the user belongs to the specified LDAP groups.
- * `LDAPConnection.authenticate()`: Attempts to bind to the LDAP server using the user's Distinguished Name (DN) and password to authenticate them.
- * If authentication is successful, `LDAPManager` then checks if a Rocket.Chat user already exists for the authenticated LDAP user (`this.findExistingUser()`).
- * Based on whether the user is new or existing, it either calls `this.loginNewUserFromLDAP()` (to create a new Rocket.Chat user) or `this.loginExistingUser()` (to log in and potentially update an existing user).
- * Both paths eventually lead to `this.onLogin()`, which can set a local password if `LDAP_Login_Fallback` is enabled and triggers the `onLDAPLogin` callback for further custom processing.
-
-4. **`LDAPConnection`** (in `apps/meteor/server/lib/ldap/Connection.ts`):
- * This class is responsible for the low-level communication with the LDAP server using the `ldapjs` library.
- * **`constructor()`**: Initializes LDAP connection options (host, port, encryption, base DN, search filters, etc.) from Rocket.Chat's settings.
- * **`connect()`**: Establishes a connection to the LDAP server. It supports plain, SSL, and TLS encryption based on configuration.
- * **`searchByUsername(escapedUsername)`**: Formulates an LDAP filter string and executes an LDAP search operation (`this.client.search()`) to find user entries matching the username.
- * **`authenticate(dn, password)`**: Performs an LDAP bind operation (`this.client.bind()`) to verify the user's credentials against the LDAP server. This is the critical step where the password is validated.
- * **`isUserAcceptedByGroupFilter(username, userdn)`**: If configured, it performs an LDAP search to check for group membership, applying dynamic filters using the provided username and user DN.
- * **`disconnect()`**: Unbinds the client from the LDAP server when the operation is complete.
-
-In summary, Rocket.Chat's LDAP authentication flow is managed by the `LDAPService`, which uses the `LDAPManager` to coordinate user lookup, authentication, and user provisioning. The `LDAPConnection` handles the direct communication with the LDAP server, utilizing the `ldapjs` library to perform connections, searches, and binds based on the system's LDAP settings.
-
-## Tool Calls (5 calls, 47,954 tokens)
-
-**Step 1:** `search({"query":"LDAP","layer":"server"})` → 417 tokens
-**Step 2:** `implement({"symbolName":"LDAP","filename":"apps/meteor/server/services/ldap/service.ts"})` → 29 tokens
-**Step 3:** `implement({"filename":"apps/meteor/server/services/ldap/service.ts","symbolName":"LDAPService"})` → 161 tokens
-**Step 4:** `implement({"filename":"apps/meteor/server/lib/ldap/Manager.ts","symbolName":"LDAPManager"})` → 4115 tokens
-**Step 5:** `implement({"filename":"apps/meteor/server/lib/ldap/Connection.ts","symbolName":"LDAPConnection"})` → 5546 tokens
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 5/6 |
-| Symbols hit | 3/4 |
-| Tool calls | 5 |
-| Total tokens | 47,954 |
diff --git a/logs/gemini-answers/new-13-room-creation.md b/logs/gemini-answers/new-13-room-creation.md
deleted file mode 100644
index 15e8e71..0000000
--- a/logs/gemini-answers/new-13-room-creation.md
+++ /dev/null
@@ -1,58 +0,0 @@
-# What happens when a user creates a new channel in Rocket.Chat?
-
-## Gemini Answer
-
-When a user creates a new channel in Rocket.Chat, the following process takes place:
-
-**Call Chain:** `Client (via Meteor.call) → createChannelMethod → hasPermissionAsync → createRoom → Rooms.createWithFullRoomData`
-
-1. **Client Invocation**: The user's action on the client-side triggers a Meteor method call to `createChannelMethod` on the server.
- * File: `apps/meteor/app/lib/server/methods/createChannel.ts` (Entry Point)
-
-2. **Permission Check**: The `createChannelMethod` first performs a permission check to ensure the user has the necessary rights to create a channel (e.g., `create-c` permission or `create-team-channel` if part of a team).
- * File: `apps/meteor/app/authorization/server/functions/hasPermission.ts`
-
-3. **Room Creation Initiation**: If permissions are granted, `createChannelMethod` then calls the central `createRoom` function, passing 'c' as the type to indicate a channel, along with the channel name, owner, members, and other optional data.
- * File: `apps/meteor/app/lib/server/methods/createChannel.ts`
-
-4. **`createRoom` Function Execution**: The `createRoom` function handles the core logic for creating the room.
- * File: `apps/meteor/app/lib/server/functions/createRoom.ts` (Core Logic)
- * **Federation Checks**: It checks for federated members and owner federation access if the room is intended to be federated.
- * **Pre-creation Callbacks/Hooks**: It runs `prepareCreateRoomCallback`, `IPreRoomCreatePrevent`, `IPreRoomCreateExtend`, and `IPreRoomCreateModify` for Apps Engine integrations.
- * **Room Properties Setup**: It constructs the room object (`roomProps`) with details like the generated name (using `getValidRoomName`), type ('c' for channel), owner, initial message count, user count, and read-only status.
- * **`beforeCreateRoomCallback`**: This callback is executed just before the room is inserted into the database.
- * **`beforeCreateChannel`**: Specifically for channels, this callback is run to allow further customization or validation before database insertion.
-
-5. **Database Insertion**: The `Rooms.createWithFullRoomData(roomProps)` command then inserts the newly defined room into the database.
- * File: `packages/models/src/models/Rooms.ts` (Database Interaction)
-
-6. **Notifications and Federation**:
- * `notifyOnRoomChanged`: Notifies relevant listeners that a new room has been created.
- * `federation.afterCreateFederatedRoom`: If the channel is federated, this callback is triggered to handle the creation of the corresponding Matrix room and send invites.
-
-7. **User Subscriptions**: `createUsersSubscriptions` is called to create subscriptions for all members in the newly created channel, and synchronizes their room role priority.
- * File: `apps/meteor/app/lib/server/functions/createRoom.ts`
-
-8. **Post-creation Callbacks/Hooks**: Finally, several asynchronous callbacks are run:
- * `afterCreateChannel`: Specific to channel creation.
- * `afterCreateRoom`: General callback for any room creation.
- * `IPostRoomCreate`: An Apps Engine event is triggered after the room is successfully created.
-
-This sequence ensures that a new channel is properly created, permissions are respected, and all relevant system components and integrations are notified.
-
-## Tool Calls (5 calls, 123,966 tokens)
-
-**Step 1:** `search({"query":"create channel","layer":"server"})` → 301 tokens
-**Step 2:** `graph({"query":"createChannelMethod","layer":"server","direction":"down"})` → 1144 tokens
-**Step 3:** `implement({"symbolName":"createRoom","filename":"apps/meteor/app/livechat/server/lib/livechat.ts"})` → 19929 tokens
-**Step 4:** `implement({"filename":"apps/meteor/app/lib/server/functions/createRoom.ts","symbolName":"createRoom"})` → 1341 tokens
-**Step 5:** `implement({"filename":"apps/meteor/app/lib/server/methods/createChannel.ts","symbolName":"createChannelMethod")` → 370 tokens
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 4/6 |
-| Symbols hit | 2/3 |
-| Tool calls | 5 |
-| Total tokens | 123,966 |
diff --git a/logs/gemini-answers/new-14-ee-license.md b/logs/gemini-answers/new-14-ee-license.md
deleted file mode 100644
index d043052..0000000
--- a/logs/gemini-answers/new-14-ee-license.md
+++ /dev/null
@@ -1,50 +0,0 @@
-# How does enterprise feature gating work in Rocket.Chat?
-
-## Gemini Answer
-
-Rocket.Chat implements enterprise feature gating primarily through a `LicenseManager` and associated middleware.
-
-Here's how it works:
-
-1. **`LicenseManager`**: This abstract class, defined in `ee/packages/license/src/license.ts`, is the core component for managing licenses. It provides methods like:
- * `hasModule(license)`: Checks if a specific enterprise module (feature) is enabled by the current license. This is a key method for feature gating.
- * `validateLicense()`: Handles the validation of an installed license.
- * `setLicense()`: Installs and decrypts a new enterprise license.
- * `shouldPreventAction()`: Determines if a particular action should be prevented based on license limits (e.g., active users, private apps).
-
-2. **License Middleware**: In `apps/meteor/ee/app/api-enterprise/server/middlewares/license.ts`, a `license` middleware is defined. This middleware takes `options` which include an array of required license modules. When an API endpoint protected by this middleware is accessed:
- * It iterates through the `options.license` array.
- * For each required license module, it calls `licenseManager.hasModule(license)` to verify if the module is active.
- * If any required module is missing, it returns a `400` status code with the error message "This is an enterprise feature \[error-action-not-allowed]".
-
-**Call Chain for Feature Gating:**
-
-1. **API Endpoint/Method Call**: A client or server component attempts to access an enterprise feature, often through a REST API endpoint or a Meteor method.
-2. **License Middleware**: For API routes, the `license` middleware (`apps/meteor/ee/app/api-enterprise/server/middlewares/license.ts`) is invoked.
-3. **`LicenseManager.hasModule()`**: The middleware calls `LicenseManager.hasModule()` (defined in `ee/packages/license/src/modules.ts`, and implemented in a concrete `LicenseManager` instance) for each required enterprise module.
-4. **Feature Access Decision**:
- * If `hasModule()` returns `true` for all required modules, the request proceeds.
- * If `hasModule()` returns `false` for any required module, access is denied, and an "error-action-not-allowed" error is returned.
-5. **Direct Checks**: In some cases (e.g., Meteor methods like `getReadReceipts` in `apps/meteor/ee/server/methods/getReadReceipts.ts`), the `LicenseManager.hasModule()` or a similar check might be directly called within the method implementation to gate the feature.
-
-In essence, enterprise feature gating in Rocket.Chat relies on a centralized `LicenseManager` to validate the active license and its granted modules, with middleware and direct code checks enforcing these license requirements across various parts of the application.
-
-## Tool Calls (8 calls, 64,212 tokens)
-
-**Step 1:** `search({"query":"enterprise feature","layer":"ee"})` → 165 tokens
-**Step 2:** `implement({"filename":"apps/meteor/ee/app/api-enterprise/server/middlewares/license.ts","symbolName":"licenseM)` → 18 tokens
-**Step 3:** `search({"query":"license","layer":"ee"})` → 336 tokens
-**Step 4:** `implement({"symbolName":"license","filename":"apps/meteor/ee/app/api-enterprise/server/middlewares/license.ts")` → 178 tokens
-**Step 5:** `search({"layer":"ee","query":"LicenseManager"})` → 56 tokens
-**Step 6:** `implement({"symbolName":"LicenseManager","filename":"ee/packages/license/src/license.ts"})` → 3627 tokens
-**Step 7:** `graph({"direction":"up","query":"LicenseManager","mode":"tree","question":"find implementations of License)` → 662 tokens
-**Step 8:** `search({"query":"extends LicenseManager","layer":"ee"})` → 17 tokens
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 3/6 |
-| Symbols hit | 3/5 |
-| Tool calls | 8 |
-| Total tokens | 64,212 |
diff --git a/logs/gemini-answers/new-15-impact-aftersave.md b/logs/gemini-answers/new-15-impact-aftersave.md
deleted file mode 100644
index 7604e21..0000000
--- a/logs/gemini-answers/new-15-impact-aftersave.md
+++ /dev/null
@@ -1,18 +0,0 @@
-# What would be impacted if the afterSaveMessage callback system were changed?
-
-## Gemini Answer
-
-
-
-## Tool Calls (0 calls, 2,600 tokens)
-
-
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 0/6 |
-| Symbols hit | 0/4 |
-| Tool calls | 0 |
-| Total tokens | 2,600 |
diff --git a/logs/gemini-answers/new-16-impact-streamer.md b/logs/gemini-answers/new-16-impact-streamer.md
deleted file mode 100644
index 16c8018..0000000
--- a/logs/gemini-answers/new-16-impact-streamer.md
+++ /dev/null
@@ -1,67 +0,0 @@
-# What is the blast radius of changing the Streamer module in Rocket.Chat?
-
-## Gemini Answer
-
-The `Streamer` module in Rocket.Chat has both server-side and client-side components, each with its own blast radius.
-
-### 1. Server-side `Streamer` Module
-
-**File Path:** `apps/meteor/server/modules/streamer/streamer.module.ts`
-
-**Role:** This module, representing `StreamerCentral`, is responsible for managing real-time data streams from the server to connected clients via DDP WebSockets.
-
-**Blast Radius:** Changes to this server-side module primarily impact the delivery of specific real-time data to the client-side administrative UI.
-
-**Call Chain & Impact:**
-
-* **Entry:** `Streamer` in `apps/meteor/server/modules/streamer/streamer.module.ts`
-* **Direct Caller:**
- * `instances` within `apps/meteor/server/modules/streamer/streamer.module.ts` (internal usage)
-* **Indirect Dependents (Client-side UI):**
- * `WorkspacePage` in `apps/meteor/client/views/admin/workspace/WorkspacePage.tsx`
- * `handleInstancesModal` in `apps/meteor/client/views/admin/workspace/DeploymentCard/DeploymentCard.tsx`
- * `DeploymentCard` in `apps/meteor/client/views/admin/workspace/DeploymentCard/DeploymentCard.tsx`
-* **3-Hop Dependents:**
- * `WorkspaceRoute` in `apps/meteor/client/views/admin/workspace/WorkspaceRoute.tsx`
- * `Template` in `apps/meteor/client/views/admin/workspace/DeploymentCard/DeploymentCard.stories.tsx`
-
-**Summary of Server-side Impact:** Alterations here would affect how real-time updates related to the workspace and deployment instances are pushed to and displayed within the Rocket.Chat administration interface.
-
-### 2. Client-side `Streamer` Module
-
-**File Path:** `apps/meteor/client/lib/streamer/streamer.ts`
-
-**Role:** This client-side module provides the `Streamer` class, which extends an event emitter (`EV`) and is responsible for managing DDP subscriptions, handling incoming real-time events, and managing the client's connection to the DDP stream.
-
-**Blast Radius:** Changes to this module have a very broad impact across the entire client application, as it is the fundamental mechanism for all real-time data synchronization.
-
-**Inferred Call Chain & Impact (based on implementation details):**
-
-* **Entry:** `Streamer` class in `apps/meteor/client/lib/streamer/streamer.ts`
-* **Impact on DDP Subscriptions:** Any part of the client application that calls `streamer.subscribe()` to listen for real-time updates from the server will be affected. This includes:
- * **Chat Messages:** New messages, message updates, and deletions.
- * **User Presence:** Online/offline status, typing indicators.
- * **Room Updates:** Changes to room names, topics, settings.
- * **Notifications:** Real-time delivery of various alerts.
- * **Any other real-time feature** relying on the DDP pub/sub model.
-* **Impact on Event Handling:** The `on()`, `once()`, `emit()`, and `receive()` methods manage how events are registered, triggered, and processed on the client. Changes here would affect the reliability and behavior of all real-time event listeners.
-* **Impact on Connection Management:** The `ddpConnection` and its `_stream.on('reset')` listener are critical for maintaining the real-time connection and handling reconnections. Modifications could lead to unstable real-time data, connection drops, or issues with re-establishing streams after disconnections.
-
-**Summary of Client-side Impact:** This module is a core part of the real-time communication infrastructure. Changes would have a widespread impact on almost every feature of the client application that relies on dynamic data updates from the server, potentially causing disruptions to real-time messaging, notifications, and user interface responsiveness.
-
-## Tool Calls (5 calls, 27,356 tokens)
-
-**Step 1:** `search({"query":"Streamer"})` → 418 tokens
-**Step 2:** `graph({"query":"Streamer","mode":"impact","direction":"up","filename":"apps/meteor/server/modules/streamer)` → 201 tokens
-**Step 3:** `graph({"direction":"up","filename":"apps/meteor/client/lib/streamer/streamer.ts","query":"Streamer","mode")` → 201 tokens
-**Step 4:** `implement({"filename":"apps/meteor/client/lib/streamer/streamer.ts","symbolName":"Streamer"})` → 884 tokens
-**Step 5:** `graph({"direction":"up","query":"Streamer","mode":"impact","filename":"apps/meteor/client/lib/streamer/str)` → 201 tokens
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 2/5 |
-| Symbols hit | 2/5 |
-| Tool calls | 5 |
-| Total tokens | 27,356 |
diff --git a/logs/gemini-answers/new-17-slash-commands.md b/logs/gemini-answers/new-17-slash-commands.md
deleted file mode 100644
index 228eb25..0000000
--- a/logs/gemini-answers/new-17-slash-commands.md
+++ /dev/null
@@ -1,57 +0,0 @@
-# How do slash commands work in Rocket.Chat — from registration to execution?
-
-## Gemini Answer
-
-Slash commands in Rocket.Chat are managed through a central `slashCommands` object, responsible for both registration and execution.
-
-**1. Registration:**
-
-* **Entry Point:** New slash commands are registered using the `slashCommands.add` method, which is typically called during server startup or module initialization.
-* **Mechanism:** The `slashCommands.add` method (defined in `apps/meteor/app/utils/server/slashCommand.ts`) takes an object with properties such as:
- * `command`: The name of the slash command (e.g., "mute").
- * `callback`: The function to execute when the command is invoked.
- * `options`: Additional settings like `params`, `description`, and `permission`.
- * `appId`: (Optional) The ID of the App that registered the command.
- * `providesPreview`, `previewer`, `previewCallback`: For commands that offer previews before full execution.
-* **Storage:** Registered commands are stored in the `slashCommands.commands` object, which acts as a registry mapping command names to their respective configurations and callback functions.
-
-**Example Registration:**
-Many core slash commands, like `/mute`, `/invite`, `/create`, are registered using `slashCommands.add` in their respective server-side files (e.g., `apps/meteor/app/slashcommands-mute/server/mute.ts`).
-
-**2. Execution:**
-
-* **Entry Point:** When a user types a slash command in the chat, the execution flow is initiated by a call to the `slashCommands.run` method.
-* **REST API Integration:** The `slashCommands.run` method is exposed to the client-side via a REST API endpoint. The specific endpoint handling command execution is registered using `API.v1.addRoute` in `apps/meteor/app/api/server/v1/commands.ts`.
-* **Mechanism:**
- 1. The `slashCommands.run` method (defined in `apps/meteor/app/utils/server/slashCommand.ts`) receives the `command` name, `params`, `message` object (containing `rid` and `_id`), `userId`, and an optional `triggerId`.
- 2. It retrieves the corresponding command configuration from `this.commands[command]`.
- 3. It performs a basic validation to ensure a `message.rid` is present.
- 4. Finally, it executes the `callback` function associated with the registered command, passing the command details as arguments.
-* **Previews:** For commands that support previews, `slashCommands.getPreviews` is called to fetch preview information, and `slashCommands.executePreview` handles the execution of a selected preview item.
-
-**Call Chain:**
-
-1. **Client-side (User input):** User types `/command` in the chat.
-2. **Server-side (REST API):** A client-side component makes an API call to the `/api/v1/commands.run` endpoint (defined in `apps/meteor/app/api/server/v1/commands.ts`).
-3. **Command Execution:** The API endpoint's handler calls `slashCommands.run` (from `apps/meteor/app/utils/server/slashCommand.ts`).
-4. **Callback Execution:** `slashCommands.run` invokes the `callback` function registered for the specific command.
-
-## Tool Calls (8 calls, 61,437 tokens)
-
-**Step 1:** `search({"query":"slashCommands"})` → 442 tokens
-**Step 2:** `graph({"layer":"server","query":"slashCommands","direction":"down"})` → 672 tokens
-**Step 3:** `implement({"symbolName":"slashCommands","filename":"apps/meteor/app/utils/server/slashCommand.ts"})` → 694 tokens
-**Step 4:** `graph({"direction":"up","layer":"server","query":"slashCommands.add"})` → 14 tokens
-**Step 5:** `search({"layer":"server","query":"slashCommands.add"})` → 605 tokens
-**Step 6:** `search({"layer":"server","query":"slashCommands.run"})` → 77 tokens
-**Step 7:** `implement({"symbolName":"slashCommands.run","filename":"apps/meteor/app/api/server/v1/commands.ts"})` → 18 tokens
-**Step 8:** `search({"query":"API.v1.addRoute","filename":"apps/meteor/app/api/server/v1/commands.ts","layer":"server"})` → 1467 tokens
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 4/6 |
-| Symbols hit | 1/2 |
-| Tool calls | 8 |
-| Total tokens | 61,437 |
diff --git a/logs/gemini-answers/new-18-webhook.md b/logs/gemini-answers/new-18-webhook.md
deleted file mode 100644
index 6e35e08..0000000
--- a/logs/gemini-answers/new-18-webhook.md
+++ /dev/null
@@ -1,41 +0,0 @@
-# How does an incoming webhook get processed in Rocket.Chat?
-
-## Gemini Answer
-
-An incoming webhook in Rocket.Chat is processed through the following chain of functions:
-
-**Call Chain:** `POST /hooks/:integrationId/:token` → `executeIntegrationRest` → `processWebhookMessage` → `sendMessage` → `Messages.insertOne` → `afterSaveMessage` callbacks
-
-1. **`POST /hooks/:integrationId/:token`** (Entry Point): An external service sends a POST request to this endpoint with the webhook payload.
-2. **`executeIntegrationRest`** (`apps/meteor/app/integrations/server/api/api.ts`):
- * This function is the initial handler for the incoming webhook.
- * It retrieves integration details, processes the request body, and handles potential scripts associated with the integration.
- * It then calls `processWebhookMessage` to continue the message processing.
-3. **`processWebhookMessage`** (`apps/meteor/app/lib/server/functions/processWebhookMessage.ts`):
- * This function is responsible for preparing the message and determining the target channels/rooms.
- * It iterates through the specified channels (or rooms) in the webhook payload.
- * For each channel, it calls `getRoomWithOptionToJoin` to resolve the room and performs permission validation using `validateRoomMessagePermissionsAsync` and `validateWebhookMessage`.
- * Finally, for each valid room, it calls the `sendMessage` function to actually send the message.
-4. **`sendMessage`** (likely `apps/meteor/app/lib/server/functions/sendMessage.ts` based on common message flow):
- * This function takes the user, message, and room as arguments.
- * It handles the core logic of saving the message to the database. This typically involves:
- * Inserting the message into the `Messages` collection (e.g., `Messages.insertOne`).
- * Triggering various `afterSaveMessage` callbacks, which can include functionalities like push notifications, Mentions, Apps Engine hooks, etc.
-
-## Tool Calls (6 calls, 38,687 tokens)
-
-**Step 1:** `search({"query":"executeIntegrationRest"})` → 32 tokens
-**Step 2:** `graph({"query":"executeIntegrationRest","direction":"down"})` → 951 tokens
-**Step 3:** `implement({"symbolName":"executeIntegrationRest","filename":"apps/meteor/app/integrations/server/api/api.ts"})` → 1140 tokens
-**Step 4:** `search({"query":"processWebhookMessage"})` → 36 tokens
-**Step 5:** `graph({"query":"processWebhookMessage","direction":"down"})` → 778 tokens
-**Step 6:** `implement({"filename":"apps/meteor/app/lib/server/functions/processWebhookMessage.ts","symbolName":"processWeb)` → 564 tokens
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 2/6 |
-| Symbols hit | 2/3 |
-| Tool calls | 6 |
-| Total tokens | 38,687 |
diff --git a/logs/gemini-answers/new-19-message-rendering.md b/logs/gemini-answers/new-19-message-rendering.md
deleted file mode 100644
index 0ed7fd3..0000000
--- a/logs/gemini-answers/new-19-message-rendering.md
+++ /dev/null
@@ -1,51 +0,0 @@
-# How is a message rendered from raw text to React components in Rocket.Chat?
-
-## Gemini Answer
-
-The rendering of a message from raw text to React components in Rocket.Chat follows a specific data transformation pipeline:
-
-**Call Chain:** Raw Text → `parse()` → Root AST (tokens) → `` → `` → ``
-
-1. **Raw Text:** The process begins with the raw text content of a message (e.g., `message.msg`).
-
-2. **`parse()` function:**
- * **File:** `packages/message-parser/src/index.ts`
- * This function takes the raw text as input and uses a defined grammar to parse it. It converts the raw text into a structured Abstract Syntax Tree (AST), represented as an array of `tokens`. The actual parsing logic is handled by an internal `grammar.parse` call.
-
-3. **`` component:**
- * **File:** `packages/gazzodown/src/Markup.tsx`
- * This React component receives the `tokens` (the AST) as its props. It iterates through each token in the AST and, based on the token's `type` (e.g., `PARAGRAPH`, `HEADING`, `BIG_EMOJI`, `CODE`, `UNORDERED_LIST`), renders a corresponding specialized React component (e.g., `ParagraphBlock`, `HeadingBlock`, `BigEmojiBlock`). This step transforms the AST into a hierarchy of basic React elements.
-
-4. **`` component:**
- * **File:** `apps/meteor/client/components/GazzodownText.tsx`
- * This component acts as a context provider (`MarkupInteractionContext.Provider`). It wraps the output of the `` component (received as its `children`). It's responsible for setting up and providing various interaction-related functionalities and data, such as:
- * Emoji detection (`detectEmoji`)
- * Highlighting regular expressions (`highlightRegex`)
- * Search text marking (`markRegex`)
- * Resolution logic for user and channel mentions (`resolveUserMention`, `resolveChannelMention`)
- * Click handlers for user and channel mentions (`onUserMentionClick`, `onChannelMentionClick`)
- * User preferences for emoji conversion and real name display.
-
-5. **`` component:**
- * **File:** `apps/meteor/client/components/message/MessageContentBody.tsx`
- * This is the top-level React component responsible for rendering the message's body. It receives the parsed AST (`md` prop) and renders it by wrapping the `` component. Inside ``, it explicitly renders ``. It also provides the overall `MessageBody` wrapper with accessibility attributes.
-
-## Tool Calls (8 calls, 49,451 tokens)
-
-**Step 1:** `search({"query":"GazzodownText","layer":"client"})` → 92 tokens
-**Step 2:** `implement({"symbolName":"GazzodownText","filename":"apps/meteor/client/components/GazzodownText.tsx"})` → 824 tokens
-**Step 3:** `search({"layer":"client","query":"Markup"})` → 582 tokens
-**Step 4:** `implement({"symbolName":"Markup","filename":"packages/gazzodown/src/Markup.tsx"})` → 331 tokens
-**Step 5:** `search({"query":"parse","layer":"packages"})` → 484 tokens
-**Step 6:** `implement({"symbolName":"parse","filename":"packages/message-parser/src/index.ts"})` → 40 tokens
-**Step 7:** `search({"layer":"client","query":"MessageContentBody"})` → 97 tokens
-**Step 8:** `implement({"symbolName":"MessageContentBody","filename":"apps/meteor/client/components/message/MessageContentB)` → 137 tokens
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 5/6 |
-| Symbols hit | 4/4 |
-| Tool calls | 8 |
-| Total tokens | 49,451 |
diff --git a/logs/gemini-answers/new-20-proxify.md b/logs/gemini-answers/new-20-proxify.md
deleted file mode 100644
index eedbad8..0000000
--- a/logs/gemini-answers/new-20-proxify.md
+++ /dev/null
@@ -1,39 +0,0 @@
-# How does the core-services proxify() pattern work for inter-service communication in Rocket.Chat?
-
-## Gemini Answer
-
-The `core-services proxify()` pattern in Rocket.Chat facilitates inter-service communication by creating a proxy object that intercepts method calls. Instead of services directly calling each other, these calls are routed through a `LocalBroker`.
-
-Here's how it works:
-
-1. **`proxify(namespace)`**: This function, found in `packages/core-services/src/lib/proxify.ts`, takes a `namespace` (which corresponds to the service's name) as an argument.
-2. **Proxy Creation**: It returns a `Proxy` object.
-3. **`handler(namespace)`**: The `Proxy` object uses a `handler` function (also defined within `packages/core-services/src/lib/proxify.ts`, though its implementation details weren't directly available in the tool output) that is responsible for intercepting method calls made on the proxy.
-4. **LocalBroker**: When a method is called on the proxified service object, the `handler` does not execute the method directly. Instead, it dispatches the call (along with its arguments and the service `namespace`) to the `LocalBroker`.
-5. **Service Instance**: The `LocalBroker` then routes this call to the actual implementation of the service, which is a `ServiceClass` instance.
-
-This pattern acts as a central message bus for service-to-service communication, decoupling services and allowing for more flexible and maintainable architecture. If a service implementation isn't found through a direct `graph` traversal, it's recommended to search for the `ServiceClass` with the corresponding service name, as the `proxify` mechanism abstracts the direct call chain.
-
-**Call Chain:**
-
-`ServiceName.method(args)` (on the proxified object) → `proxify('ServiceName')` (defined in `packages/core-services/src/lib/proxify.ts`) → `LocalBroker` (defined in `packages/core-services/src/LocalBroker.ts`) → `ServiceClass` instance (the actual service implementation).
-
-## Tool Calls (8 calls, 41,191 tokens)
-
-**Step 1:** `search({"query":"proxify"})` → 115 tokens
-**Step 2:** `implement({"symbolName":"proxify","filename":"packages/core-services/src/lib/proxify.ts"})` → 51 tokens
-**Step 3:** `search({"query":"handler","layer":"packages"})` → 511 tokens
-**Step 4:** `implement({"filename":"packages/core-services/src/lib/proxify.ts","symbolName":"proxify"})` → 51 tokens
-**Step 5:** `search({"query":"handler.ts","layer":"packages"})` → 331 tokens
-**Step 6:** `implement({"symbolName":"proxify","filename":"packages/core-services/src/lib/proxify.ts"})` → 51 tokens
-**Step 7:** `implement({"filename":"packages/core-services/src/lib/proxify.ts"})` → 8 tokens
-**Step 8:** `search({"query":"handler","layer":"packages"})` → 511 tokens
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 2/6 |
-| Symbols hit | 3/4 |
-| Tool calls | 8 |
-| Total tokens | 41,191 |
diff --git a/logs/gemini-answers/new-21-impact-settings.md b/logs/gemini-answers/new-21-impact-settings.md
deleted file mode 100644
index ed5f0be..0000000
--- a/logs/gemini-answers/new-21-impact-settings.md
+++ /dev/null
@@ -1,34 +0,0 @@
-# What would be affected if the CachedSettings system were changed?
-
-## Gemini Answer
-
-Changes to the `CachedSettings` system would primarily affect the **REST API** and potentially **Enterprise Edition (EE) communication**.
-
-**Call Chain:**
-
-1. **Entry:** `CachedSettings` (apps/meteor/app/settings/server/CachedSettings.ts)
-2. **Step 1:** `metricsMiddleware` (apps/meteor/app/api/server/middlewares/metrics.ts) and `cors` (apps/meteor/app/api/server/middlewares/cors.ts) directly utilize `CachedSettings`.
-3. **Step 2:**
- * Both `metricsMiddleware` and `cors` are called by `startRestAPI` (apps/meteor/app/api/server/api.ts).
- * `metricsMiddleware` is also called by `loadAPI` (apps/meteor/ee/server/apps/communication/rest.ts).
-
-**Affected Areas:**
-
-* **REST API Configuration:** Any settings managed by `CachedSettings` that relate to the REST API's behavior for metrics collection or CORS headers would be impacted.
-* **Metrics Collection:** How metrics are gathered and reported for API requests, as defined in `metricsMiddleware`, would be affected.
-* **CORS Handling:** The Cross-Origin Resource Sharing (CORS) configuration for the API, handled by the `cors` middleware, would be influenced.
-* **Enterprise Edition (EE) Communication:** If the `loadAPI` function in the EE communication module relies on `CachedSettings` through `metricsMiddleware`, then EE-specific API functionalities related to metrics might also be affected.
-
-## Tool Calls (2 calls, 8,765 tokens)
-
-**Step 1:** `search({"query":"CachedSettings"})` → 31 tokens
-**Step 2:** `graph({"depth":3,"query":"CachedSettings","direction":"up"})` → 141 tokens
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 1/5 |
-| Symbols hit | 1/3 |
-| Tool calls | 2 |
-| Total tokens | 8,765 |
diff --git a/logs/gemini-answers/new-22-2fa.md b/logs/gemini-answers/new-22-2fa.md
deleted file mode 100644
index a740dd1..0000000
--- a/logs/gemini-answers/new-22-2fa.md
+++ /dev/null
@@ -1,63 +0,0 @@
-# How does two-factor authentication (2FA) work in Rocket.Chat?
-
-## Gemini Answer
-
-Two-factor authentication (2FA) in Rocket.Chat is primarily handled on the server-side, ensuring that operations requiring a second factor are properly validated. The core mechanism revolves around a higher-order function that wraps protected operations and a central validation function that checks the provided 2FA code.
-
-The call chain for 2FA validation is as follows:
-
-**Entry Point (e.g., a Meteor method or API route protected by 2FA)** → `twoFactorRequired` → `checkCodeForUser` → `selectedMethod.verify` (method-specific verification, e.g., for TOTP or email codes).
-
-Here's a detailed breakdown:
-
-1. **`twoFactorRequired`**:
- * **File**: `apps/meteor/app/2fa/server/twoFactorRequired.ts`
- * This is a higher-order function that wraps any server-side operation (like a Meteor method or an API endpoint) that requires 2FA.
- * When a wrapped function is called, `twoFactorRequired` first verifies if the user is logged in.
- * It extracts any 2FA code and method provided in the arguments of the incoming request.
- * It then delegates the actual 2FA validation to `checkCodeForUser`.
-
-2. **`checkCodeForUser`**:
- * **File**: `apps/meteor/app/2fa/server/code/index.ts`
- * This is the central function for 2FA validation.
- * It performs several initial checks:
- * Verifies if 2FA is globally enabled via the `Accounts_TwoFactorAuthentication_Enabled` setting.
- * Checks for an existing authorized token (e.g., "remember me" functionality) via `isAuthorizedForToken`. If authorized, it bypasses 2FA.
- * It attempts to extract the 2FA code and method from `x-2fa-code` and `x-2fa-method` HTTP headers if not provided directly in the arguments. This is crucial for API clients.
- * It determines the active 2FA method for the user (e.g., Time-based One-time Password (TOTP) or email-based code) using `getSecondFactorMethod`.
- * **If no 2FA code is provided** but 2FA is required, it throws a `Meteor.Error('totp-required')`, which signals to the client that a 2FA code is needed, along with information about available methods.
- * **If a 2FA code is provided**, it calls `selectedMethod.verify(user, code)` to validate the code against the user's configured 2FA method.
- * It handles invalid codes by checking for `maxFailedAttemptsReached` and throwing appropriate errors (`totp-invalid`, `totp-max-attempts`).
- * Upon successful validation, it can remember the authorization for the connection.
-
-3. **Method-Specific Verification**:
- * Depending on the chosen 2FA method, `selectedMethod.verify` will delegate to specific implementations. Examples include:
- * `apps/meteor/app/2fa/server/code/TOTPCheck.ts`: For verifying TOTP codes generated by authenticator apps.
- * `apps/meteor/app/2fa/server/code/EmailCheck.ts`: For verifying codes sent to the user's email address.
-
-**Key Files Involved:**
-
-* `apps/meteor/app/2fa/server/twoFactorRequired.ts`: Enforces 2FA for protected operations.
-* `apps/meteor/app/2fa/server/code/index.ts`: Contains the `checkCodeForUser` function, the core logic for 2FA validation.
-* `apps/meteor/app/2fa/server/code/TOTPCheck.ts`: Handles verification for TOTP (authenticator app) 2FA.
-* `apps/meteor/app/2fa/server/code/EmailCheck.ts`: Handles verification for email-based 2FA.
-* `apps/meteor/app/2fa/server/loginHandler.ts`: Integrates 2FA checks into the user login process.
-
-## Tool Calls (7 calls, 34,032 tokens)
-
-**Step 1:** `search({"query":"2FA","layer":"server"})` → 500 tokens
-**Step 2:** `graph({"query":"loginHandler","layer":"server","direction":"down"})` → 13 tokens
-**Step 3:** `search({"layer":"server","query":"loginHandler"})` → 159 tokens
-**Step 4:** `graph({"direction":"down","question":"How does two-factor authentication (2FA) work?","query":"loginHandle)` → 13 tokens
-**Step 5:** `implement({"filename":"apps/meteor/app/2fa/server/twoFactorRequired.ts","symbolName":"twoFactorRequired"})` → 329 tokens
-**Step 6:** `search({"query":"checkCodeForUser","layer":"server"})` → 29 tokens
-**Step 7:** `implement({"filename":"apps/meteor/app/2fa/server/code/index.ts","symbolName":"checkCodeForUser"})` → 517 tokens
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 6/6 |
-| Symbols hit | 4/4 |
-| Tool calls | 7 |
-| Total tokens | 34,032 |
diff --git a/logs/gemini-answers/new-23-omnichannel.md b/logs/gemini-answers/new-23-omnichannel.md
deleted file mode 100644
index 65c7e76..0000000
--- a/logs/gemini-answers/new-23-omnichannel.md
+++ /dev/null
@@ -1,54 +0,0 @@
-# How does the Omnichannel queue process and close a livechat conversation?
-
-## Gemini Answer
-
-The Omnichannel queue processes and closes a livechat conversation through the `closeRoom` function, which is located in `apps/meteor/app/livechat/server/lib/closeRoom.ts`.
-
-Here's a breakdown of the process:
-
-**Entry Point:**
-
-* `closeRoom` (apps/meteor/app/livechat/server/lib/closeRoom.ts)
-
-**Call Chain for Closing a Livechat Conversation:**
-
-1. **`closeRoom`** (apps/meteor/app/livechat/server/lib/closeRoom.ts): This is the main asynchronous function responsible for closing a livechat room. It handles transaction management and retries in case of transient errors.
- * It starts a MongoDB session and transaction.
- * It calls `doCloseRoom` to perform the core closing logic.
- * If `doCloseRoom` is successful, it commits the transaction.
- * In case of errors, it aborts the transaction and handles retries.
- * Finally, it calls `afterRoomClosed` (not detailed in the provided information, but indicated as the next step after a successful room closure) to handle post-closure actions.
-
-2. **`doCloseRoom`** (apps/meteor/app/livechat/server/lib/closeRoom.ts): This function contains the core logic for closing the livechat room within a transaction.
- * It performs checks to ensure the room is open and if a comment is required for closing.
- * It resolves chat tags.
- * It calculates the chat duration and service time duration.
- * It determines who closed the conversation (user or visitor) and populates `closeData` with relevant information.
- * It retrieves the livechat inquiry using `LivechatInquiry.findOneByRoomId`.
- * It removes the inquiry from the queue using `LivechatInquiry.removeByRoomId` and notifies about the inquiry change.
- * It updates the room status to closed in the database using `LivechatRooms.closeRoomById`.
- * It removes associated subscriptions using `Subscriptions.removeByRoomId` and notifies about subscription changes.
- * It retrieves the updated room and notifies about the room change.
- * It returns the updated room, the closer information, and the removed inquiry.
-
-The information gathered did not provide details on the "Omnichannel queue processing" specifically beyond the removal of the inquiry from the queue during the closing process. The `RoutingManager` and `getLivechatQueueInfo` functions appear to be related to managing and retrieving information about the livechat queue but were not directly linked to the closing mechanism in the provided graph results.
-
-## Tool Calls (8 calls, 52,912 tokens)
-
-**Step 1:** `search({"query":"RoutingManager","layer":"server"})` → 57 tokens
-**Step 2:** `graph({"question":"How does the Omnichannel queue process and close a livechat conversation?","direction":)` → 806 tokens
-**Step 3:** `search({"layer":"server","query":"closeLivechatConversation"})` → 17 tokens
-**Step 4:** `search({"query":"Livechat queue","layer":"server"})` → 167 tokens
-**Step 5:** `graph({"query":"getLivechatQueueInfo","layer":"server","direction":"down","question":"How does the Omnicha)` → 648 tokens
-**Step 6:** `search({"query":"closeRoom","layer":"server"})` → 135 tokens
-**Step 7:** `implement({"filename":"apps/meteor/app/livechat/server/lib/closeRoom.ts","symbolName":"closeRoom"})` → 326 tokens
-**Step 8:** `implement({"filename":"apps/meteor/app/livechat/server/lib/closeRoom.ts","symbolName":"doCloseRoom"})` → 865 tokens
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 3/6 |
-| Symbols hit | 1/4 |
-| Tool calls | 8 |
-| Total tokens | 52,912 |
diff --git a/logs/gemini-answers/new-24-autotranslate.md b/logs/gemini-answers/new-24-autotranslate.md
deleted file mode 100644
index 8e3f831..0000000
--- a/logs/gemini-answers/new-24-autotranslate.md
+++ /dev/null
@@ -1,43 +0,0 @@
-# How does the auto-translate feature work for messages in Rocket.Chat?
-
-## Gemini Answer
-
-The auto-translate feature in Rocket.Chat works by leveraging a `TranslationProviderRegistry` to manage and execute translations through different providers.
-
-Here's a breakdown of the process:
-
-1. **Initiation**: The translation of a message can be explicitly triggered by the `translateMessage` function located in `apps/meteor/app/autotranslate/server/functions/translateMessage.ts`. This function takes the target language and the message as input.
-
-2. **Provider Registry**: The `translateMessage` function delegates the actual translation task to the `TranslationProviderRegistry` class, which is defined in `apps/meteor/app/autotranslate/server/autotranslate.ts`. This registry is responsible for:
- * Registering different translation providers (e.g., Microsoft Translate, Google Translate).
- * Determining if auto-translation is enabled.
- * Identifying the currently active translation provider.
- * Calling the `translateMessage` method of the active provider.
-
-3. **Active Provider**: The `TranslationProviderRegistry` retrieves the `AutoTranslate` instance of the configured translation service. This `AutoTranslate` instance contains the specific logic and API calls required to communicate with the chosen external translation service (e.g., Google Translate API).
-
-4. **Automatic Translation Trigger**: The `TranslationProviderRegistry` also registers an `afterSaveMessage` callback. This means that after a message is successfully saved to the database, this callback is invoked. If auto-translation is enabled and an active provider is set, the provider's `translateMessage` method will be called to translate the newly saved message.
-
-**Call Chain:**
-
-`Entry` (e.g., user action, message save) → `apps/meteor/app/autotranslate/server/functions/translateMessage.ts` (or `afterSaveMessage` callback) → `TranslationProviderRegistry` (in `apps/meteor/app/autotranslate/server/autotranslate.ts`) → Active `AutoTranslate` provider (e.g., `_translateMessage` in `apps/meteor/app/autotranslate/server/msTranslate.ts` or `apps/meteor/app/autotranslate/server/googleTranslate.ts` etc.)
-
-## Tool Calls (8 calls, 44,426 tokens)
-
-**Step 1:** `search({"query":"auto-translate"})` → 15 tokens
-**Step 2:** `search({"query":"translate message"})` → 207 tokens
-**Step 3:** `graph({"layer":"server","direction":"down","query":"translateMessage"})` → 644 tokens
-**Step 4:** `implement({"symbolName":"_translateMessage","filename":"apps/meteor/app/autotranslate/server/msTranslate.ts"})` → 135 tokens
-**Step 5:** `implement({"filename":"apps/meteor/app/autotranslate/server/autotranslate.ts","symbolName":"translateMessage"})` → 89 tokens
-**Step 6:** `implement({"symbolName":"translateMessage","filename":"apps/meteor/app/autotranslate/server/functions/translat)` → 140 tokens
-**Step 7:** `search({"query":"TranslationProviderRegistry","layer":"server"})` → 35 tokens
-**Step 8:** `implement({"filename":"apps/meteor/app/autotranslate/server/autotranslate.ts","symbolName":"TranslationProvide)` → 658 tokens
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 5/6 |
-| Symbols hit | 2/2 |
-| Tool calls | 8 |
-| Total tokens | 44,426 |
diff --git a/logs/gemini-answers/new-25-search.md b/logs/gemini-answers/new-25-search.md
deleted file mode 100644
index 6010570..0000000
--- a/logs/gemini-answers/new-25-search.md
+++ /dev/null
@@ -1,64 +0,0 @@
-# How does message search work in Rocket.Chat?
-
-## Gemini Answer
-
-The message search functionality in Rocket.Chat works by parsing user input on the server and constructing a MongoDB query to retrieve relevant messages.
-
-Here's the detailed architecture and call chain:
-
-**1. Client-side User Interface:**
- - **Entry Point:** The user interacts with the message search interface, typically within the `MessageSearchTab` (file: `apps/meteor/client/views/room/contextualBar/MessageSearchTab/MessageSearchTab.tsx`) and `MessageSearchForm` (file: `apps/meteor/client/views/room/contextualBar/MessageSearchTab/components/MessageSearchForm.tsx`).
- - The user's input from the search form is then handled by client-side logic, likely involving the `useMessageSearchQuery` hook (file: `apps/meteor/client/views/room/contextualBar/MessageSearchTab/hooks/useMessageSearchQuery.ts`). This hook prepares the search parameters and triggers a DDP method call.
-
-**2. DDP Method Call (Client to Server):**
- - The client-side code makes a DDP (Distributed Data Protocol) call to the server using `sdk.call('messageSearch')`. This crosses the DDP boundary, sending the search text and other parameters to the server.
-
-**3. Server-side Message Search Method:**
- - **Method:** `messageSearch`
- - **File:** `apps/meteor/server/methods/messageSearch.ts`
- - This method receives the `userId`, the raw `text` search query, optional `rid` (room ID), `limit`, and `offset`.
- - **Permission and Global Search Check:** It first verifies if the user has permission to access the specified room (`canAccessRoomIdAsync`). For global searches (when `rid` is not provided), it checks if `Search.defaultProvider.GlobalSearchEnabled` is active.
- - **User Information:** It retrieves the `user` object using `Users.findOneById(userId)`.
- - **Query Parsing:** The core of converting the user's text into a structured database query happens here. It calls `parseMessageSearchQuery(text, { user, offset, limit, forceRegex })`.
- - **MongoDB Query Augmentation:**
- - It adds default filters to hide removed messages (`t: {$ne: 'rm'}`) and hidden messages (`_hidden: {$ne: true}`).
- - If a `rid` is provided, it filters messages by that specific room (`query.rid = rid`).
- - If no `rid` is provided (global search), it identifies all rooms the user has subscriptions to (`Subscriptions.findByUserId(user._id).toArray()`) and filters messages within those rooms (`query.rid = { $in: [...] }`).
- - **Database Execution:** Finally, it executes the constructed MongoDB query using `Messages.find(query, { readPreference: readSecondaryPreferred(Messages.col.s.db), ...options }).toArray()`, retrieving the matching messages from the `Messages` collection.
-
-**4. Query Parsing Logic:**
- - **Function:** `parseMessageSearchQuery`
- - **File:** `apps/meteor/server/lib/parseMessageSearchQuery.ts`
- - This function acts as a wrapper, instantiating and delegating the actual parsing to the `MessageSearchQueryParser` class.
-
-**5. Message Search Query Parser:**
- - **Class:** `MessageSearchQueryParser`
- - **File:** `apps/meteor/server/lib/parseMessageSearchQuery.ts`
- - This class is responsible for breaking down the raw search string into MongoDB query components:
- - It has a `parse` method that applies a series of "consume" methods in sequence.
- - Each `consume` method uses regular expressions to identify and extract specific search modifiers (e.g., `from:username`, `mention:user`, `has:star`, `has:url`, `is:pinned`, `has:location`, `label:"tag"`, `file-desc:"description"`, `file-title:"title"`, `before:DD-MM-YYYY`, `after:DD-MM-YYYY`, `on:DD-MM-YYYY`, `sort:asc`).
- - As these modifiers are found, they are converted into corresponding MongoDB query operators (`$regex`, `$exists`, `$lte`, `$gte`, `$in`, etc.) and added to the `this.query` object or `this.options` object (for sorting, skip, and limit).
- - Any remaining text after processing all modifiers is treated as the primary message content to be searched. This can either use a MongoDB regular expression (`$regex`) or, by default, MongoDB's full-text search operator (`$text`) if enabled, also setting a `score` projection for relevance.
- - The `parse` method returns the fully constructed MongoDB `query` and `options` objects.
-
-**Call Chain Summary:**
-
-`MessageSearchTab` (client) → `MessageSearchForm` (client) → `useMessageSearchQuery` (client) → `sdk.call('messageSearch')` (DDP boundary) → `messageSearch` (server: `apps/meteor/server/methods/messageSearch.ts`) → `parseMessageSearchQuery` (server: `apps/meteor/server/lib/parseMessageSearchQuery.ts`) → `MessageSearchQueryParser.parse` (server: `apps/meteor/server/lib/parseMessageSearchQuery.ts`) → `Messages.find` (MongoDB model operation).
-
-## Tool Calls (6 calls, 42,995 tokens)
-
-**Step 1:** `search({"query":"message search"})` → 248 tokens
-**Step 2:** `graph({"direction":"down","layer":"server","query":"messageSearch"})` → 1318 tokens
-**Step 3:** `implement({"symbolName":"messageSearch","filename":"apps/meteor/server/methods/messageSearch.ts"})` → 389 tokens
-**Step 4:** `implement({"filename":"apps/meteor/server/lib/parseMessageSearchQuery.ts","symbolName":"parseMessageSearchQuer)` → 237 tokens
-**Step 5:** `search({"query":"MessageSearchQueryParser","layer":"server"})` → 96 tokens
-**Step 6:** `implement({"filename":"apps/meteor/server/lib/parseMessageSearchQuery.ts","symbolName":"MessageSearchQueryPars)` → 1802 tokens
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 0/6 |
-| Symbols hit | 0/3 |
-| Tool calls | 6 |
-| Total tokens | 42,995 |
diff --git a/logs/gemini-answers/new-26-team.md b/logs/gemini-answers/new-26-team.md
deleted file mode 100644
index 86ded11..0000000
--- a/logs/gemini-answers/new-26-team.md
+++ /dev/null
@@ -1,88 +0,0 @@
-# How does the Team feature work in Rocket.Chat?
-
-## Gemini Answer
-
-The Rocket.Chat Team feature is a server-side implemented functionality that groups users and rooms, providing a structured collaboration environment.
-
-**Architecture Overview:**
-
-The core of the Team feature resides in the `TeamService` on the server, which handles all business logic and interactions with the database models. Client-side actions trigger DDP (Distributed Data Protocol) calls that are routed to this service.
-
-**Call Chain:**
-
-1. **Client-side UI Action:** A user interacts with the Rocket.Chat client (e.g., clicks "Create Team," "Add Member").
-2. **`sdk.call('methodName')`:** The client-side application makes a DDP call to the server, targeting a method associated with team operations.
-3. **`packages/core-services/src/index.ts` (Team Service Proxy):** The call is intercepted by the `Team` service proxy, defined as `export const Team = proxify('team');`. This proxy directs the request to the actual `TeamService` instance.
-4. **`apps/meteor/server/services/team/service.ts` (TeamService Implementation):** The relevant method within the `TeamService` is executed. This is where the primary logic for team management, member handling, and room association resides.
-5. **Database Interaction:** The `TeamService` interacts with several database models (`Team`, `TeamMember`, `Rooms`, `Users`, `Subscriptions`) to perform CRUD (Create, Read, Update, Delete) operations.
-6. **Event Broadcasts:** After successful operations, events are often broadcast (`notifyOnRoomChangedById`, `api.broadcast('user.roleUpdate')`) to update connected clients in real-time.
-
-**Key Functionalities:**
-
-The `TeamService` provides a comprehensive set of functionalities for managing teams:
-
-* **Team Creation:**
- * The `create` method allows creating a new team, along with its designated "main room" (which can be a public channel or private group).
- * It handles checks for name availability and adds initial members with appropriate roles.
-
-* **Team Information & Management:**
- * Methods like `update`, `deleteById`, and `deleteByName` handle modifications and removal of teams.
- * Various retrieval methods (`list`, `listAll`, `findBySubscribedUserIds`, `search`, `getOneById`, etc.) allow fetching team data based on different criteria.
-
-* **Room Association:**
- * **Adding Rooms (`addRooms`):** Existing Rocket.Chat rooms can be added to a team. The `teamId` field on the room document is updated to establish the association.
- * **Removing Rooms (`removeRoom`):** Rooms can be detached from a team.
- * **Default Rooms (`updateRoom`):** Rooms within a team can be marked as "default," meaning new members joining the team will automatically be added to these rooms.
- * **Listing Rooms (`listRooms`, `listRoomsOfUser`):** Provides ways to list rooms belonging to a team, considering user permissions and filters.
-
-* **Member Management:**
- * **Adding Members (`addMembers`, `addMember`):** Users can be added to teams, and this process also enrolls them in the team's main room and any default rooms. Roles can be assigned during this process.
- * **Updating Members (`updateMember`):** Member roles within a team can be changed.
- * **Removing Members (`removeMember`, `removeMembers`, `removeAllMembersFromTeam`):** Users can be removed from teams, with checks in place to prevent accidental removal of the last team owner.
- * **Listing Members (`members`):** Retrieves details of members within a team, including their roles.
-
-* **Role Management:**
- * Methods like `addRolesToMember` and `removeRolesFromMember` manage roles at the team level (stored in the `TeamMember` collection).
- * `addRolesToSubscription` manages roles specifically for a user's subscription to a room, especially relevant for the team's main room.
-
-* **Statistics & Autocomplete:**
- * `getStatistics` provides aggregate data about teams.
- * `autocomplete` assists users in finding teams by name, taking into account user access.
-
-**Data Storage:**
-
-The Team feature leverages several MongoDB collections:
-
-* **`Team` collection:** Stores core team information (e.g., `_id`, `name`, `type`, the `roomId` of its main room).
-* **`TeamMember` collection:** Defines the relationship between users and teams, including the `userId`, `teamId`, and assigned `roles`.
-* **`Rooms` collection:** Each room document can have a `teamId` field linking it to its parent team and a `teamDefault` boolean to indicate if it's a default room.
-* **`Subscriptions` collection:** Stores user subscriptions to rooms, which also reflects team-related roles for the main room.
-* **`Users` collection:** Stores general user information.
-
-**Permissions:**
-
-The `Authorization` service is deeply integrated to enforce permissions. For example, `Authorization.canAccessRoom` and `Authorization.hasPermission` are used to control who can view, add, or remove rooms and manage members within a team.
-
-**File Paths:**
-
-* `apps/meteor/server/services/team/service.ts`: The primary implementation of the `TeamService`.
-* `packages/core-services/src/index.ts`: Defines the `Team` service proxy.
-* `packages/models/src/models/Team.ts`: Defines the `Team` database model.
-* `packages/models/src/models/TeamMember.ts`: Defines the `TeamMember` database model.
-* `packages/models/src/models/Rooms.ts`: Defines the `Rooms` database model, including `teamId` and `teamDefault` fields.
-
-## Tool Calls (4 calls, 35,541 tokens)
-
-**Step 1:** `search({"query":"Team"})` → 419 tokens
-**Step 2:** `implement({"filename":"packages/core-services/src/index.ts","symbolName":"Team"})` → 29 tokens
-**Step 3:** `search({"query":"TeamService"})` → 54 tokens
-**Step 4:** `implement({"symbolName":"TeamService","filename":"apps/meteor/server/services/team/service.ts"})` → 7756 tokens
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 4/6 |
-| Symbols hit | 2/2 |
-| Tool calls | 4 |
-| Total tokens | 35,541 |
diff --git a/logs/gemini-answers/new-27-video-conference.md b/logs/gemini-answers/new-27-video-conference.md
deleted file mode 100644
index e24b076..0000000
--- a/logs/gemini-answers/new-27-video-conference.md
+++ /dev/null
@@ -1,51 +0,0 @@
-# How does the video conference system work in Rocket.Chat?
-
-## Gemini Answer
-
-The video conference system in Rocket.Chat is designed to integrate with various video conference providers. The core functionality involves:
-
-**1. Client-side Management:**
- - The `VideoConfManager` in `apps/meteor/client/lib/VideoConfManager.ts` appears to be the central client-side component for handling video conference capabilities, including logging errors and managing conference states.
-
-**2. Data Model:**
- - The `IVideoConference.ts` file in `packages/core-typings/src/IVideoConference.ts` and `packages/apps-engine/src/definition/videoConferences/IVideoConference.ts` defines the structure for video conference data, including types for direct calls, group conferences, and livechat conferences. It also specifies the `VideoConferenceStatus` (CALLING, STARTED, EXPIRED, ENDED, DECLINED) and details about users, messages, and the conference provider.
- - The `VideoConference` symbol in `packages/models/src/index.ts` is a proxified model for interacting with video conference data.
-
-**3. Server-side API and Bridges:**
- - The REST API endpoint for video conferences is handled by `videoConferenceRoutes` in `apps/meteor/app/api/server/v1/videoConference.ts`. This suggests that external systems or the Rocket.Chat client can interact with video conference functionality through this API.
- - The `VideoConferenceBridge` in `packages/apps-engine/src/server/bridges/VideoConferenceBridge.ts` acts as a bridge for the Apps Engine, allowing Rocket.Chat Apps to interact with video conference functionalities.
- - `apps/meteor/app/apps/server/bridges/videoConferences.ts` is another bridge for Apps to interact with video conferences, likely related to core Rocket.Chat functionality.
-
-**4. App Integration:**
- - The system is designed to allow different video conference providers to be integrated, as indicated by `AppVideoConference` in `packages/apps-engine/src/definition/videoConferences/AppVideoConference.ts` and `IVideoConfProvider` in `packages/apps-engine/src/definition/videoConfProviders/IVideoConfProvider.ts`. This suggests a pluggable architecture where various video conferencing services can be used.
-
-**5. Creation and Management:**
- - While a direct "create video conference" function wasn't explicitly found in a single server-side service, the `VideoConferenceCreateData` types in `packages/core-typings/src/IVideoConference.ts` indicate the data required to initiate a video conference. It's likely that the actual creation is orchestrated through the DDP methods or REST API, which then interacts with the configured video conference provider via the Apps Engine bridges.
-
-**Call Chain (Inferred):**
-
-1. **Client-side initiation:** A user initiates a video conference through the Rocket.Chat client, which likely triggers actions managed by `VideoConfManager` (apps/meteor/client/lib/VideoConfManager.ts).
-2. **API/DDP call:** The client-side action sends a request to the server, possibly via a DDP method or a REST API endpoint like those handled by `videoConferenceRoutes` (apps/meteor/app/api/server/v1/videoConference.ts).
-3. **Server-side processing:** The server receives the request and, based on the `VideoConferenceCreateData`, interacts with the appropriate video conference provider. This interaction likely happens through the Apps Engine bridges (e.g., `VideoConferenceBridge` in `packages/apps-engine/src/server/bridges/VideoConferenceBridge.ts` or `apps/meteor/app/apps/server/bridges/videoConferences.ts`) to communicate with the specific video conference provider's API.
-4. **Database operations:** The `VideoConference` model (packages/models/src/index.ts) is used to persist information about the video conference in the database, based on the `IVideoConference` structure (packages/core-typings/src/IVideoConference.ts).
-5. **Real-time updates:** Changes in the video conference status are likely pushed back to clients via DDP subscriptions or real-time updates.
-
-## Tool Calls (8 calls, 63,873 tokens)
-
-**Step 1:** `search({"query":"video conference"})` → 853 tokens
-**Step 2:** `graph({"layer":"client","direction":"down","query":"VideoConfManager"})` → 786 tokens
-**Step 3:** `search({"query":"create video conference","layer":"server"})` → 171 tokens
-**Step 4:** `implement({"symbolName":"VideoConference","filename":"apps/meteor/server/services/video-conference/service.ts")` → 1395 tokens
-**Step 5:** `search({"layer":"server","query":"VideoConferenceService"})` → 17 tokens
-**Step 6:** `implement({"filename":"apps/meteor/server/services/video-conference/service.ts","symbolName":""})` → 8 tokens
-**Step 7:** `search({"layer":"server","query":"service.ts startVideoConference"})` → 19 tokens
-**Step 8:** `search({"query":"VideoConference","layer":"server"})` → 307 tokens
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 2/6 |
-| Symbols hit | 0/2 |
-| Tool calls | 8 |
-| Total tokens | 63,873 |
diff --git a/logs/gemini-answers/tour-04-msg-client.md b/logs/gemini-answers/tour-04-msg-client.md
deleted file mode 100644
index a2a2849..0000000
--- a/logs/gemini-answers/tour-04-msg-client.md
+++ /dev/null
@@ -1,39 +0,0 @@
-# How is a message sent on the client side in Rocket.Chat?
-
-## Gemini Answer
-
-When a message is sent on the client side in Rocket.Chat, the process starts within the `MessageBox` component. This component is responsible for handling user input and triggering the message sending flow.
-
-Here's the client-side call chain for sending a message:
-
-`MessageBox` (`apps/meteor/client/views/room/composer/messageBox/MessageBox.tsx`)
-* The `MessageBox` component provides the UI for composing messages.
-* It utilizes a `chat` context, obtained via `useChat()` from `apps/meteor/client/views/room/contexts/ChatContext.ts`, which provides access to the `ComposerAPI`.
-* When the user types a message and triggers the send action (e.g., by pressing Enter), the `handleSendMessage` event handler is invoked.
-* `handleSendMessage` retrieves the message text from `chat.composer?.text` and then calls the `onSend` prop, passing an object containing the message `value`, `tshow`, `previewUrls`, and `isSlashCommandAllowed`.
-
-At this point, the `onSend` prop of `MessageBox` is expected to lead to the `chat.flows.sendMessage()` function. Although the direct implementation of `chat.flows.sendMessage` was not explicitly retrieved, it's a critical step in the client-side message sending process, as indicated by architectural notes and usage in other client-side components. This function is ultimately responsible for initiating the communication with the server to persist and deliver the message, typically via `sdk.call('sendMessage')`, which crosses the DDP boundary to the server.
-
-**Call Chain:**
-
-`MessageBox` (`apps/meteor/client/views/room/composer/messageBox/MessageBox.tsx`) → `onSend` (prop) → `chat.flows.sendMessage()` → `sdk.call('sendMessage')`
-
-## Tool Calls (8 calls, 81,675 tokens)
-
-**Step 1:** `search({"query":"MessageBox","layer":"client"})` → 615 tokens
-**Step 2:** `graph({"layer":"client","query":"MessageBox","direction":"down"})` → 452 tokens
-**Step 3:** `implement({"symbolName":"MessageBox","filename":"apps/meteor/client/views/room/composer/messageBox/MessageBox.)` → 2897 tokens
-**Step 4:** `search({"query":"chat.flows.sendMessage","layer":"client"})` → 155 tokens
-**Step 5:** `search({"query":"useChat","layer":"client"})` → 120 tokens
-**Step 6:** `implement({"filename":"apps/meteor/client/views/room/contexts/ChatContext.ts","symbolName":"useChat"})` → 39 tokens
-**Step 7:** `search({"query":"ChatContext","layer":"client"})` → 31 tokens
-**Step 8:** `implement({"filename":"apps/meteor/client/views/room/contexts/ChatContext.ts","symbolName":"ChatContext"})` → 38 tokens
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 1/6 |
-| Symbols hit | 4/5 |
-| Tool calls | 8 |
-| Total tokens | 81,675 |
diff --git a/logs/gemini-answers/tour-05-msg-server.md b/logs/gemini-answers/tour-05-msg-server.md
deleted file mode 100644
index f21bb3b..0000000
--- a/logs/gemini-answers/tour-05-msg-server.md
+++ /dev/null
@@ -1,70 +0,0 @@
-# How is a message sent on the server side in Rocket.Chat?
-
-## Gemini Answer
-
-Here's how a message is sent on the server side in Rocket.Chat:
-
-**Call Chain:** `Meteor.methods({ sendMessage })` → `executeSendMessage` → `sendMessage` → `Messages.insertOne` → `afterSaveMessage` callbacks → `sendMessageNotifications` → `sendNotification`
-
-1. **`Meteor.methods({ sendMessage })`**: The process begins when a client calls the `sendMessage` DDP method, which is handled by a Meteor method defined on the server. This acts as the entry point for server-side message processing.
-
-2. **`executeSendMessage`** (in `apps/meteor/app/lib/server/methods/sendMessage.ts`):
- * This function is responsible for initial validation and preparation of the message.
- * It performs checks such as:
- * Ensuring `tshow` is accompanied by `tmid` for threads.
- * Verifying if threads are enabled when `tmid` is present.
- * Validating the message timestamp to prevent out-of-sync issues.
- * Checking if the message size exceeds the `Message_MaxAllowedSize` setting.
- * Retrieving user information.
- * Resolving the `rid` (room ID) for threaded messages.
- * Verifying user permissions to send messages in the specified room using `canSendMessageAsync`.
- * Enforcing E2E encryption rules for encrypted rooms.
- * Finally, it calls the core `sendMessage` function to persist the message.
-
-3. **`sendMessage`** (in `apps/meteor/app/lib/server/functions/sendMessage.ts`):
- * This is the core function for message persistence and post-processing.
- * It further validates and prepares the message object.
- * It integrates with the Rocket.Chat Apps Engine, triggering `IPreMessageSentPrevent`, `IPreMessageSentExtend`, and `IPreMessageSentModify` events, allowing installed apps to interact with and modify the message before it's saved.
- * The message is then saved into the database:
- * If `upsert` is true and `_id` exists, it updates an existing message using `Messages.updateOne`.
- * Otherwise, it inserts a new message using `Messages.insertOne`.
- * After saving, it triggers `IPostSystemMessageSent` (for system messages) or `IPostMessageSent` (for regular messages) App Engine events.
- * It then calls the `afterSaveMessage` callback.
-
-4. **`afterSaveMessage` callbacks**:
- * This is a callback event system (`callbacks.add('afterSaveMessage', handler)`).
- * Various modules can register handlers for this event to perform actions after a message has been saved.
- * Examples include:
- * `apps/meteor/app/search/server/events/index.ts` registers a handler for search indexing.
- * `apps/meteor/app/slackbridge/server/RocketAdapter.ts` registers a handler for Slack integration.
- * One critical callback is `sendMessageNotifications` (in `apps/meteor/app/lib/server/lib/sendNotificationsOnMessage.ts`).
-
-5. **`sendMessageNotifications`** (in `apps/meteor/app/lib/server/lib/sendNotificationsOnMessage.ts`):
- * This function is responsible for determining if and how notifications should be sent for the new message.
- * It iterates through users in the room and checks their notification preferences.
- * For each user, it calls `sendNotification` (per user) based on whether they should be notified on mobile, desktop, or via email.
-
-6. **`sendNotification`**:
- * This function (not fully implemented in the provided details but inferred from the architecture) handles the actual dispatch of various types of notifications.
- * It considers `shouldNotifyMobile`/`Desktop`/`Email` settings.
- * Ultimately, it pushes notifications to the `NotificationQueue`, which then uses `PushNotification` to send them via services like APN (Apple Push Notification) or FCM (Firebase Cloud Messaging).
-
-## Tool Calls (8 calls, 54,960 tokens)
-
-**Step 1:** `search({"query":"executeSendMessage","layer":"server"})` → 132 tokens
-**Step 2:** `graph({"query":"executeSendMessage","layer":"server","direction":"down"})` → 434 tokens
-**Step 3:** `implement({"filename":"apps/meteor/app/lib/server/methods/sendMessage.ts","symbolName":"executeSendMessage"})` → 826 tokens
-**Step 4:** `search({"query":"sendMessage","layer":"server"})` → 379 tokens
-**Step 5:** `implement({"filename":"apps/meteor/app/lib/server/functions/sendMessage.ts","symbolName":"sendMessage"})` → 594 tokens
-**Step 6:** `graph({"direction":"down","query":"afterSaveMessage","edgeTypes":["event_listen"]})` → 40 tokens
-**Step 7:** `search({"query":"callbacks.add('afterSaveMessage'"})` → 164 tokens
-**Step 8:** `search({"query":"sendMessageNotifications"})` → 137 tokens
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 4/6 |
-| Symbols hit | 2/3 |
-| Tool calls | 8 |
-| Total tokens | 54,960 |
diff --git a/logs/gemini-answers/tour-06-endpoint.md b/logs/gemini-answers/tour-06-endpoint.md
deleted file mode 100644
index 36c5082..0000000
--- a/logs/gemini-answers/tour-06-endpoint.md
+++ /dev/null
@@ -1,75 +0,0 @@
-# How do you create a new REST API endpoint in Rocket.Chat?
-
-## Gemini Answer
-
-To create a new REST API endpoint in Rocket.Chat, you would typically use the `API.v1.addRoute` method, which is an instance of the `ApiClass`.
-
-Here's a breakdown of the process and the relevant files:
-
-1. **Entry Point:** The `ApiClass` in `apps/meteor/app/api/server/ApiClass.ts` is the core component for defining REST API endpoints.
-
-2. **Defining a Route:** New routes are added using `API.v1.addRoute(path, options)`, where:
- * `path` is the URL path for your endpoint (e.g., `'my-new-endpoint'`).
- * `options` is an object containing HTTP method handlers (GET, POST, etc.) and middleware.
-
- You can find numerous examples of this in files like:
- * `apps/meteor/app/livechat/server/api/v1/room.ts`
- * `apps/meteor/app/api/server/v1/channels.ts`
- * `apps/meteor/app/api/server/v1/users.ts`
-
- These files demonstrate how `API.v1.addRoute` is used to define various endpoints with their respective logic for different HTTP methods.
-
-**Example Structure:**
-
-
-```typescript
-// apps/meteor/app/api/server/v1/myNewEndpoint.ts
-import { API } from '../Api'; // Assuming this path, adjust if needed
-
-API.v1.addRoute('my-new-endpoint', {
- get() {
- // Logic for GET requests to /api/v1/my-new-endpoint
- return API.v1.success({ message: 'This is a GET request!' });
- },
- post() {
- // Logic for POST requests to /api/v1/my-new-endpoint
- const { data } = this.bodyParams;
- return API.v1.success({ receivedData: data });
- },
- // You can add put, delete, etc.
-});
-```
-
-
-**Call Chain (conceptual):**
-
-`Your new route file` (e.g., `apps/meteor/app/api/server/v1/myNewEndpoint.ts`)
- `API.v1.addRoute()`
- `ApiClass` (defined in `apps/meteor/app/api/server/ApiClass.ts`)
-
-To implement a new API endpoint:
-
-1. Create a new file (e.g., `my-custom-api.ts`) within a relevant `apps/meteor/app/api/server/v1/` or `apps/meteor/app/livechat/server/api/v1/` directory.
-2. Import the `API` object.
-3. Use `API.v1.addRoute()` to define your endpoint, specifying the path and the handlers for the HTTP methods you want to support.
-4. Implement the business logic within the handler functions, including any necessary authentication, permission checks, and data processing.
-
-## Tool Calls (8 calls, 41,521 tokens)
-
-**Step 1:** `search({"query":"ApiClass"})` → 27 tokens
-**Step 2:** `graph({"query":"ApiClass","depth":3,"direction":"down"})` → 12 tokens
-**Step 3:** `implement({"symbolName":"ApiClass","filename":"apps/meteor/app/api/server/ApiClass.ts"})` → 15 tokens
-**Step 4:** `search({"layer":"server","query":"route"})` → 349 tokens
-**Step 5:** `implement({"filename":"/Users/echoooooo/Desktop/code/Rocket.Chat/apps/meteor/server/routes/userDataDownload.ts)` → 15 tokens
-**Step 6:** `search({"query":"ApiClass.addRoute","layer":"server"})` → 15 tokens
-**Step 7:** `search({"query":"API.v1.addRoute","layer":"server"})` → 1467 tokens
-**Step 8:** `graph({"direction":"up","layer":"server","depth":2,"query":"API.v1.addRoute"})` → 14 tokens
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 3/6 |
-| Symbols hit | 2/4 |
-| Tool calls | 8 |
-| Total tokens | 41,521 |
diff --git a/logs/gemini-answers/tour-07-db-model-create.md b/logs/gemini-answers/tour-07-db-model-create.md
deleted file mode 100644
index 77900f7..0000000
--- a/logs/gemini-answers/tour-07-db-model-create.md
+++ /dev/null
@@ -1,96 +0,0 @@
-# How do you create a new database model in Rocket.Chat?
-
-## Gemini Answer
-
-To create a new database model in Rocket.Chat, you will follow a pattern of defining an interface for your data and then creating a class that extends `BaseRaw` (the base class for all database models). This class will interact with your MongoDB collection.
-
-Here's a breakdown of the steps:
-
-**Call Chain:** You won't find a direct call chain for "creating" a model, as it's a structural definition. However, the `MessagesRaw` model serves as an excellent example.
-
-1. **Define Your Model's Interface:**
- * First, define a TypeScript interface for your new data model. This interface should extend `IRocketChatRecord` (found in `packages/models/src/IRocketChatRecord.ts`) to include common fields like `_id` and `_updatedAt`.
- * **Example:**
-
-```typescript
- // packages/models/src/your-new-model/IYourNewModel.ts
- import { IRocketChatRecord } from '../IRocketChatRecord';
-
- export interface IYourNewModel extends IRocketChatRecord {
- name: string;
- description: string;
- createdAt: Date;
- // Add other fields specific to your model
- }
- ```
-
-
-2. **Create Your Model Class:**
- * Create a new class for your model that extends `BaseRaw`.
- * The `BaseRaw` class (located in `packages/models/src/BaseRaw.ts`) provides fundamental database operations (find, insert, update, delete).
- * In the constructor of your new class, call `super(db, 'your-collection-name', trash)`.
- * `db`: The MongoDB `Db` instance.
- * `'your-collection-name'`: The name of the MongoDB collection for this model.
- * `trash`: An optional `Collection>` for soft-deleting documents (e.g., if you need a trash collection for your model).
- * **Example:**
-
-```typescript
- // packages/models/src/your-new-model/YourNewModel.ts
- import { Db, Collection, IndexDescription } from 'mongodb';
- import { BaseRaw } from '../BaseRaw'; // Path to BaseRaw.ts
- import { IYourNewModel } from './IYourNewModel';
- import { RocketChatRecordDeleted } from '../IRocketChatRecord';
-
- export class YourNewModelRaw extends BaseRaw {
- constructor(db: Db, trash?: Collection>) {
- super(db, 'your-new-collection-name', trash);
- }
-
- // Optional: Define MongoDB indexes
- protected override modelIndexes(): IndexDescription[] {
- return [
- { key: { name: 1 }, unique: true }, // Example index
- ];
- }
-
- // Add custom methods for querying or manipulating YourNewModel documents
- async findByName(name: string): Promise {
- return this.findOne({ name });
- }
-
- async createYourNewDocument(name: string, description: string): Promise {
- const newDoc: Omit = {
- name,
- description,
- createdAt: new Date(),
- };
- const result = await this.insertOne(newDoc);
- return { _id: result.insertedId.toHexString(), _updatedAt: new Date(), ...newDoc };
- }
- }
- ```
-
-
-**Key Files Involved:**
-
-* `packages/models/src/IRocketChatRecord.ts`: Defines the base interface for all Rocket.Chat records.
-* `packages/models/src/BaseRaw.ts`: The abstract base class that provides common database operations for models.
-* `packages/models/src/models/Messages.ts`: (Example) Shows a concrete implementation of a database model, `MessagesRaw`, extending `BaseRaw`.
-
-By following this structure, you can define new database models that integrate seamlessly with Rocket.Chat's data layer.
-
-## Tool Calls (4 calls, 38,172 tokens)
-
-**Step 1:** `search({"layer":"packages","query":"BaseDbModel"})` → 14 tokens
-**Step 2:** `search({"layer":"packages","query":"Collection"})` → 168 tokens
-**Step 3:** `search({"query":"MessagesRaw","layer":"packages"})` → 27 tokens
-**Step 4:** `implement({"symbolName":"MessagesRaw","filename":"packages/models/src/models/Messages.ts"})` → 10066 tokens
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 2/6 |
-| Symbols hit | 2/3 |
-| Tool calls | 4 |
-| Total tokens | 38,172 |
diff --git a/logs/gemini-answers/tour-08-db-model-use.md b/logs/gemini-answers/tour-08-db-model-use.md
deleted file mode 100644
index 2b34ced..0000000
--- a/logs/gemini-answers/tour-08-db-model-use.md
+++ /dev/null
@@ -1,19 +0,0 @@
-# How do you use a database model to query data in Rocket.Chat?
-
-## Gemini Answer
-
-
-
-## Tool Calls (2 calls, 32,378 tokens)
-
-**Step 1:** `search({"query":"MessagesRaw","layer":"packages"})` → 27 tokens
-**Step 2:** `implement({"symbolName":"MessagesRaw","filename":"packages/models/src/models/Messages.ts"})` → 10066 tokens
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 1/6 |
-| Symbols hit | 0/2 |
-| Tool calls | 2 |
-| Total tokens | 32,378 |
diff --git a/logs/gemini-answers/tour-10-new-service.md b/logs/gemini-answers/tour-10-new-service.md
deleted file mode 100644
index e747f72..0000000
--- a/logs/gemini-answers/tour-10-new-service.md
+++ /dev/null
@@ -1,84 +0,0 @@
-# How do you add a new service in Rocket.Chat?
-
-## Gemini Answer
-
-To add a new service in Rocket.Chat, you need to define a new class that extends the `ServiceClass` and then register it with the application's API during startup.
-
-Here's the step-by-step process:
-
-1. **Define your Service Class**:
- * Create a new TypeScript class that extends `ServiceClass` from `packages/core-services/src/types/ServiceClass.ts`.
- * Your class must define a `protected name: string;` property, which is the unique identifier for your service.
- * You can override the `created()`, `started()`, and `stopped()` lifecycle methods to execute code when the service is initialized, started, or stopped, respectively.
- * Add any custom methods and properties to your service class to implement its functionality.
-
-2. **Register your Service**:
- * Locate the `registerServices` function in `apps/meteor/server/services/startup.ts`.
- * Inside this function, create an instance of your new service class.
- * Call `api.registerService()` with your service instance. If your service has dependencies on other services, you can pass an array of their names as the second argument.
-
-**Example Structure:**
-
-
-```typescript
-// services/MyNewService/service.ts (example path)
-import { ServiceClass } from '@rocket.chat/core-services';
-
-class MyNewService extends ServiceClass {
- protected name = 'MyNewService';
-
- async created(): Promise {
- console.log('MyNewService: created!');
- }
-
- async started(): Promise {
- console.log('MyNewService: started!');
- // Your service's startup logic here
- }
-
- async stopped(): Promise {
- console.log('MyNewService: stopped!');
- // Your service's cleanup logic here
- }
-
- public myCustomMethod(message: string): string {
- return `MyNewService received: ${message}`;
- }
-}
-
-// In apps/meteor/server/services/startup.ts
-import { MyNewService } from './MyNewService/service'; // Adjust import path
-
-export const registerServices = async (): Promise => {
- // ... other service registrations
- api.registerService(new MyNewService());
- // ...
-};
-```
-
-
-**Call Chain:**
-
-1. **`apps/meteor/server/services/startup.ts`** (`registerServices`): This function is responsible for instantiating and registering all server-side services.
-2. **`packages/core-services/src/lib/Api.ts`** (`api.registerService`): The `api` object (an instance of `Api`) provides the `registerService` method, which acts as an intermediary.
-3. **`packages/core-services/src/LocalBroker.ts`** (`broker.createService`): The `Api` then delegates the actual service creation and registration to the `LocalBroker`, which manages the lifecycle and method exposure of all services.
-4. **Your new `ServiceClass` instance**: The `LocalBroker` then interacts with your service instance, calling its lifecycle methods and making its public methods available for inter-service communication via the broker.
-
-## Tool Calls (7 calls, 45,164 tokens)
-
-**Step 1:** `search({"query":"ServiceClass","layer":"server"})` → 99 tokens
-**Step 2:** `implement({"symbolName":"ServiceClass","filename":"packages/core-services/src/types/ServiceClass.ts"})` → 582 tokens
-**Step 3:** `search({"query":"LocalBroker","layer":"packages"})` → 97 tokens
-**Step 4:** `implement({"symbolName":"LocalBroker","filename":"packages/core-services/src/LocalBroker.ts"})` → 1674 tokens
-**Step 5:** `graph({"depth":2,"query":"createService","filename":"packages/core-services/src/LocalBroker.ts","direction)` → 263 tokens
-**Step 6:** `implement({"filename":"apps/meteor/server/services/startup.ts","symbolName":"registerServices"})` → 499 tokens
-**Step 7:** `implement({"filename":"packages/core-services/src/lib/Api.ts","symbolName":"Api"})` → 498 tokens
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 0/6 |
-| Symbols hit | 1/4 |
-| Tool calls | 7 |
-| Total tokens | 45,164 |
diff --git a/logs/gemini-answers/tour-11-new-package.md b/logs/gemini-answers/tour-11-new-package.md
deleted file mode 100644
index 9a1d99b..0000000
--- a/logs/gemini-answers/tour-11-new-package.md
+++ /dev/null
@@ -1,70 +0,0 @@
-# How do you create a new package in the Rocket.Chat monorepo?
-
-## Gemini Answer
-
-To create a new package in the Rocket.Chat monorepo, you would follow a standard monorepo package creation process, establishing a consistent directory structure and essential configuration files. While specific `create-package` scripts may exist, the fundamental steps involve manually setting up the necessary files and directories.
-
-Here's the typical process and structure:
-
-**1. Create the Package Directory:**
- - Navigate to the `packages/` directory in the monorepo root.
- - Create a new directory for your package, e.g., `packages/your-new-package`.
-
-**2. Initialize `package.json`:**
- - Inside `packages/your-new-package/`, create a `package.json` file. This file defines your package's metadata, dependencies, and scripts.
- - You can copy and adapt a `package.json` from an existing simple package (e.g., `packages/core-services/package.json`) as a starting point. Key fields to include are:
- - `name`: `@rocket.chat/your-new-package` (using the `@rocket.chat` scope is standard)
- - `version`: Initial version, e.g., `0.0.1`
- - `description`: A brief description of your package
- - `main` and `types`: Entry points for JavaScript and TypeScript, respectively (e.g., `dist/index.js`, `dist/index.d.ts`)
- - `scripts`: Common scripts like `build`, `start`, `test`, `lint`
- - `dependencies` and `devDependencies`: Any external or internal packages your new package relies on.
-
-**3. Configure TypeScript (`tsconfig.json`):**
- - Create a `tsconfig.json` file in `packages/your-new-package/`.
- - This file configures the TypeScript compiler for your package. Again, you can adapt one from an existing package. It will typically extend a base `tsconfig` from the monorepo root (e.g., `../../tsconfig.json`) and specify `rootDir`, `outDir`, and files to include.
-
-**4. Set up Source Code Directory:**
- - Create a `src/` directory inside `packages/your-new-package/`.
- - This is where your main TypeScript source files will reside (e.g., `packages/your-new-package/src/index.ts`).
-
-**5. (Optional) Testing Configuration:**
- - If your package will have tests, create a `jest.config.ts` (or similar for other testing frameworks) in `packages/your-new-package/`.
- - Example: `packages/core-services/jest.config.ts` indicates a testing setup.
-
-**6. Build and Link:**
- - Once these files are in place, the monorepo's build system (e.g., Turborepo, Lerna, pnpm workspaces) will typically pick up the new package.
- - You might need to run a command like `pnpm install` or `pnpm build` from the monorepo root to install dependencies and build your new package, making it available to other packages in the monorepo.
-
-**Example File Structure:**
-
-
-```
-packages/
-└── your-new-package/
- ├── src/
- │ └── index.ts
- ├── package.json
- ├── tsconfig.json
- └── jest.config.ts (optional)
-```
-
-
-By following these steps, you establish a new package that adheres to the monorepo's conventions, allowing for proper dependency management, building, and testing within the Rocket.Chat ecosystem.
-
-## Tool Calls (5 calls, 20,562 tokens)
-
-**Step 1:** `search({"query":"create package","layer":"packages"})` → 15 tokens
-**Step 2:** `search({"query":"package.json","layer":"packages"})` → 42 tokens
-**Step 3:** `search({"query":"packages/core-services"})` → 336 tokens
-**Step 4:** `implement({"filename":"packages/core-services/package.json","symbolName":"package.json"})` → 16 tokens
-**Step 5:** `implement({"filename":"packages/core-services/package.json","symbolName":"*"})` → 14 tokens
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | 4/5 |
-| Symbols hit | 0/1 |
-| Tool calls | 5 |
-| Total tokens | 20,562 |
diff --git a/logs/tool-eval.md b/logs/tool-eval.md
deleted file mode 100644
index 28d3090..0000000
--- a/logs/tool-eval.md
+++ /dev/null
@@ -1,117 +0,0 @@
-# Layer 1 — Tool Eval Report
-
-6/1/2026, 8:12:20 PM
-
-## Summary: 25/34 passed
-
-| Metric | Average |
-|--------|---------|
-| File recall (search) | 94.6% |
-| Symbol recall (search) | 100.0% |
-| Graph reachability | 100.0% |
-
-## Per-Testcase Results
-
-| # | ID | Subsystem | Files | Symbols | Graph | Pass |
-|---|---|---|---|---|---|---|
-| 1 | tour-04-msg-client | message chat | 6/6 | 5/5 | 6/6 | PASS |
-| 2 | tour-05-msg-server | message chat | 6/6 | 3/3 | 5/5 | PASS |
-| 3 | tour-06-endpoint | api | 3/6 | 4/4 | 2/2 | **FAIL** |
-| 4 | tour-07-db-model-create | database | 5/6 | 3/3 | 2/2 | **FAIL** |
-| 5 | tour-08-db-model-use | database | 6/6 | 2/2 | 2/2 | PASS |
-| 6 | tour-10-new-service | services | 6/6 | 4/4 | 4/4 | PASS |
-| 7 | tour-11-new-package | tooling | 5/5 | 1/1 | - | PASS |
-| 8 | claude-01-push-notifications | push notifications | 6/6 | 5/5 | 6/6 | PASS |
-| 9 | claude-02-msg-permissions | authorization | 6/6 | 4/4 | 4/4 | PASS |
-| 10 | claude-03-file-upload | file upload | 5/6 | 6/6 | 3/3 | **FAIL** |
-| 11 | claude-04-e2e-encryption | e2e encryption | 6/6 | 6/6 | 5/5 | PASS |
-| 12 | claude-05-call-chain | message chat | 5/6 | 8/8 | 8/8 | **FAIL** |
-| 13 | claude-06-livechat-routing | livechat | 5/6 | 6/6 | 6/6 | **FAIL** |
-| 14 | claude-07-api-endpoints | api | 5/6 | 5/5 | 7/7 | **FAIL** |
-| 15 | claude-08-federation | federation | 6/6 | 5/5 | 4/4 | PASS |
-| 16 | new-09-realtime-streamer | streamer | 5/5 | 4/4 | 5/5 | PASS |
-| 17 | new-10-apps-engine | apps engine | 5/6 | 5/5 | 5/5 | **FAIL** |
-| 18 | new-11-settings | settings | 6/6 | 3/3 | 3/3 | PASS |
-| 19 | new-12-ldap-auth | authentication | 5/6 | 4/4 | 4/4 | **FAIL** |
-| 20 | new-13-room-creation | rooms | 6/6 | 3/3 | 3/3 | PASS |
-| 21 | new-14-ee-license | ee licensing | 6/6 | 5/5 | 3/3 | PASS |
-| 22 | new-15-impact-aftersave | message chat | 6/6 | 4/4 | 3/3 | PASS |
-| 23 | new-16-impact-streamer | streamer | 5/5 | 5/5 | 3/3 | PASS |
-| 24 | new-17-slash-commands | slash commands | 6/6 | 2/2 | 4/4 | PASS |
-| 25 | new-18-webhook | integrations | 6/6 | 3/3 | 3/3 | PASS |
-| 26 | new-19-message-rendering | message rendering | 6/6 | 4/4 | 2/2 | PASS |
-| 27 | new-20-proxify | core-services | 6/6 | 4/4 | 3/3 | PASS |
-| 28 | new-21-impact-settings | settings | 5/5 | 3/3 | 3/3 | PASS |
-| 29 | new-22-2fa | 2fa | 6/6 | 4/4 | 4/4 | PASS |
-| 30 | new-23-omnichannel | omnichannel | 5/6 | 4/4 | 3/3 | **FAIL** |
-| 31 | new-24-autotranslate | autotranslate | 6/6 | 2/2 | 3/3 | PASS |
-| 32 | new-25-search | search | 6/6 | 3/3 | 3/3 | PASS |
-| 33 | new-26-team | team | 6/6 | 2/2 | - | PASS |
-| 34 | new-27-video-conference | video conference | 6/6 | 2/2 | - | PASS |
-
-## Failures
-
-### tour-06-endpoint — api
-
-**Q:** How do you create a new REST API endpoint in Rocket.Chat?
-
-**Missed files (search):**
-- `apps/meteor/app/api/server/router.ts`
-- `apps/meteor/app/api/server/middlewares/permissions.ts`
-- `apps/meteor/app/api/server/v1/chat.ts`
-
-### tour-07-db-model-create — database
-
-**Q:** How do you create a new database model in Rocket.Chat?
-
-**Missed files (search):**
-- `apps/meteor/server/models.ts`
-
-### claude-03-file-upload — file upload
-
-**Q:** What is the storage workflow for file uploads in Rocket.Chat?
-
-**Missed files (search):**
-- `apps/meteor/app/file-upload/server/config/Webdav.ts`
-
-### claude-05-call-chain — message chat
-
-**Q:** What is the complete call chain for sendMessage?
-
-**Missed files (search):**
-- `apps/meteor/app/api/server/v1/chat.ts`
-
-### claude-06-livechat-routing — livechat
-
-**Q:** How are Livechat requests routed to the server-side in Rocket.Chat?
-
-**Missed files (search):**
-- `packages/livechat/src/widget.ts`
-
-### claude-07-api-endpoints — api
-
-**Q:** How are new endpoints registered in the REST API in Rocket.Chat?
-
-**Missed files (search):**
-- `apps/meteor/app/api/server/definition.ts`
-
-### new-10-apps-engine — apps engine
-
-**Q:** How does a Rocket.Chat App hook into events like afterSaveMessage via the Apps Engine?
-
-**Missed files (search):**
-- `apps/meteor/app/apps/server/bridges/bridges.js`
-
-### new-12-ldap-auth — authentication
-
-**Q:** How does LDAP authentication work in Rocket.Chat?
-
-**Missed files (search):**
-- `apps/meteor/server/lib/ldap/Logger.ts`
-
-### new-23-omnichannel — omnichannel
-
-**Q:** How does the Omnichannel queue process and close a livechat conversation?
-
-**Missed files (search):**
-- `apps/meteor/app/livechat/server/lib/Helper.ts`
diff --git a/package-lock.json b/package-lock.json
index f393bd4..9313e0f 100644
--- a/package-lock.json
+++ b/package-lock.json
@@ -1,26 +1,21 @@
{
- "name": "gemini-mcp-code-analyzer",
+ "name": "rocket-chat-code-analyzer",
"version": "1.0.0",
"lockfileVersion": 3,
"requires": true,
"packages": {
"": {
- "name": "gemini-mcp-code-analyzer",
+ "name": "rocket-chat-code-analyzer",
"version": "1.0.0",
"dependencies": {
- "@google/generative-ai": "^0.21.0",
"@modelcontextprotocol/sdk": "^1.27.1",
"cli-progress": "^3.12.0",
- "dotenv": "^17.3.1",
"fuzzysort": "^3.1.0",
"glob": "^13.0.6",
- "graphology": "^0.26.0",
- "graphology-metrics": "^2.4.0",
- "pdfkit": "^0.17.2",
- "strip-ansi": "^7.2.0",
"ts-morph": "^21.0.1"
},
"devDependencies": {
+ "@google/generative-ai": "^0.21.0",
"@types/cli-progress": "^3.11.6",
"@types/node": "^20.11.0",
"tsx": "^4.21.0",
@@ -473,6 +468,7 @@
"version": "0.21.0",
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- "dependencies": {
- "pako": "^0.2.5",
- "tiny-inflate": "^1.0.0"
- }
- },
"node_modules/unpipe": {
"version": "1.0.0",
"resolved": "https://registry.npmjs.org/unpipe/-/unpipe-1.0.0.tgz",
diff --git a/package.json b/package.json
index 9a34839..5d800f8 100644
--- a/package.json
+++ b/package.json
@@ -8,26 +8,24 @@
"prewarm": "NODE_OPTIONS=\"--max-old-space-size=8192\" npx tsx src/server/index.ts --prewarm",
"start": "NODE_OPTIONS=\"--max-old-space-size=8192\" npx tsx src/server/index.ts",
"inspect": "npx @modelcontextprotocol/inspector npx tsx src/server/index.ts",
- "eval": "NODE_OPTIONS=\"--max-old-space-size=8192\" npx tsx src/eval/tool-eval.ts",
- "eval:agent": "NODE_OPTIONS=\"--max-old-space-size=8192\" npx tsx src/eval/agent-eval.ts",
- "eval:baseline": "npx tsx src/eval/baseline-eval.ts",
- "agy": "agy",
+ "gen:nomcp": "npx tsx src/eval/gen-gemini-nomcp.ts",
+ "gen:mcp": "NODE_OPTIONS=\"--max-old-space-size=8192\" npx tsx src/eval/gen-gemini-mcp-selfloop.ts",
+ "eval:1": "npx tsx src/eval/eval-1-nomcp-vs-mcp.ts",
+ "eval:2": "NODE_OPTIONS=\"--max-old-space-size=8192\" npx tsx src/eval/eval-2-mcp-tools.ts",
+ "eval:3": "npx tsx src/eval/eval-3-mcp-vs-claude.ts",
+ "eval:4": "npx tsx src/eval/eval-4-agy.ts",
+ "agy": "agy --model gemini-2.5-flash",
"agy:pro": "agy --model gemini-2.5-pro"
},
"dependencies": {
- "@google/generative-ai": "^0.21.0",
"@modelcontextprotocol/sdk": "^1.27.1",
"cli-progress": "^3.12.0",
- "dotenv": "^17.3.1",
"fuzzysort": "^3.1.0",
"glob": "^13.0.6",
- "graphology": "^0.26.0",
- "graphology-metrics": "^2.4.0",
- "pdfkit": "^0.17.2",
- "strip-ansi": "^7.2.0",
"ts-morph": "^21.0.1"
},
"devDependencies": {
+ "@google/generative-ai": "^0.21.0",
"@types/cli-progress": "^3.11.6",
"@types/node": "^20.11.0",
"tsx": "^4.21.0",
diff --git a/src/architecture.json b/src/architecture.json
new file mode 100644
index 0000000..f297b8c
--- /dev/null
+++ b/src/architecture.json
@@ -0,0 +1,122 @@
+[
+ {
+ "keywords": ["sendMessage", "sdk.call", "Meteor.call", "Meteor.methods", "DDP"],
+ "hint": "Pattern — DDP Method Dispatch:\nClient calls sdk.call('methodName') → DDP protocol over WebSocket → server Meteor.methods({ methodName }) handles it.\nThe indexer connects client and server via shared method names: graph(\"methodName\", \"up\") shows client caller, graph(\"methodName\", \"down\") shows server handler.\nIf you see sdk.call('X') on client side, search(\"X\", layer=\"server\") to find the server handler."
+ },
+ {
+ "keywords": ["callbacks.run", "callbacks.add", "afterSaveMessage", "beforeSaveMessage", "afterSaveUser"],
+ "hint": "Pattern — Callback Event System:\ncallbacks.run('eventName') executes all registered handlers sequentially → callbacks.add('eventName', handler, priority) registers listeners sorted by priority.\nThese are NOT connected by imports. Use graph(\"eventName\", \"down\", edgeTypes=[\"event_listen\"]) to find all registered handlers.\nCommon events: afterSaveMessage (notifications, autotranslate, slackbridge, apps engine), afterSaveUser, afterDeleteMessage, afterCreateChannel."
+ },
+ {
+ "keywords": ["proxify", "LocalBroker", "ServiceClass", "ServiceClassInternal"],
+ "hint": "Pattern — core-services Bus:\nServices do NOT call each other via direct imports. They use proxify('IServiceName') → api.call('namespace.method') → LocalBroker.call() → bound ServiceClass method.\nLocalBroker stores methods as 'serviceName.methodName' → bound function. Services extend ServiceClassInternal (monolith) or ServiceClass.\nIf graph can't find a service, search for the class name (e.g., search(\"RoomService\"))."
+ },
+ {
+ "keywords": ["Meteor.publish", "Meteor.subscribe", "StreamerCentral", "Streamer", "streamRoomMessage", "notifyOnMessageChange"],
+ "hint": "Pattern — Real-time Streaming:\nAfter DB write: notifyOnMessageChange() → api.broadcast('watch.messages') → ListenersModule event handler → streamRoomMessage.emitWithoutBroadcast(roomId, message) → Streamer._emit() → DDP WebSocket → client Streamer.receive().\nClient subscribes via Meteor.subscribe() or Streamer.on(). StreamerCentral is the singleton managing all streamer instances.\nAuthorization: streamRoomMessage.allowRead() checks canReadRoom() before delivering."
+ },
+ {
+ "keywords": ["AppManager", "AppListenerManager", "executeListener", "IPostMessageSent", "IPreMessageSent", "AppBridge", "RealAppBridges"],
+ "hint": "Pattern — Apps Engine Hooks:\nApps register lifecycle hooks (IPreMessageSent, IPostMessageSent, etc.) → AppListenerManager.executeListener() fires them.\nIn sendMessage flow: Apps.triggerEvent(IPreMessageSentPrevent) can block sending, IPreMessageSentModify can alter the message, IPostMessageSent fires after save.\nBridge layer adapts between core RC and App sandbox. The connection is event-based, not import-based."
+ },
+ {
+ "keywords": ["parse", "Markup", "GazzodownText", "MessageContentBody", "message-parser", "gazzodown"],
+ "hint": "Pattern — Message Rendering Pipeline:\nThis is a data transformation pipeline, NOT a call chain. graph cannot fully traverse it.\nFlow: message.msg → parse() (packages/message-parser) → AST nodes → component (packages/gazzodown) → block components (ParagraphBlock, HeadingBlock, QuoteBlock etc.).\nUse implement on parse() and Markup separately — they are in different packages."
+ },
+ {
+ "keywords": ["ComposerMessage", "ComposerContainer", "MessageBox", "handleSendMessage", "onSend", "RoomComposer", "ChatAPI", "RoomBody", "ChatMessages"],
+ "hint": "Architecture — Client Message Flow:\nRoomBody renders wrapping .\nComposerContainer is a conditional renderer — checks room state (archived, read-only, omnichannel, federated, anonymous, blocked) and renders the appropriate composer variant. For normal rooms → ComposerMessage.\nComposerMessage wires onSend: stops typing indicator → chat.flows.sendMessage({ text, tshow, previewUrls, tmid }).\nMessageBox is the actual textarea UI — handleSendMessage gets text from chat.composer, calls onSend prop.\nThe flow ends with sdk.call('sendMessage') crossing the DDP boundary."
+ },
+ {
+ "keywords": ["executeSendMessage", "canSendMessage", "validateMessage", "canSendMessageAsync", "validateRoomMessagePermissionsAsync"],
+ "hint": "Architecture — Server Message Flow:\nMeteor.methods({ sendMessage }) validates user → calls executeSendMessage(uid, message).\nexecuteSendMessage: validates thread params, checks timestamp within 60s, validates message size, then calls canSendMessageAsync(rid, user) for room access/permission checks.\ncanSendMessageAsync → validateRoomMessagePermissionsAsync: checks room exists, not archived, canAccessRoom, not blocked, read-only permissions, muted status.\nThen calls sendMessage(user, message, room): validateMessage (XSS in hrefs, attachments, custom fields) → prepareMessageObject → Apps Engine pre-hooks (IPreMessageSentPrevent/Modify) → Message.beforeSave → Messages.insertOne → Apps Engine post-hooks → afterSaveMessage → notifyOnRoomChangedById."
+ },
+ {
+ "keywords": ["NotificationQueue", "PushNotification", "shouldNotifyMobile", "sendNotification", "sendAllNotifications", "sendNotificationsOnMessage", "PushClass"],
+ "hint": "Architecture — Notifications:\nTriggered by afterSaveMessage callback (registered with LOW priority).\nsendAllNotifications → sendMessageNotifications → per-user sendNotification which checks:\n- shouldNotifyDesktop → notifyDesktopUser() (sent immediately, NOT queued)\n- shouldNotifyMobile → Notification.scheduleItem({type:'push'}) (queued with delay: 120s online, 0s offline)\n- shouldNotifyEmail → Notification.scheduleItem({type:'email'}) (queued)\nNotificationQueue worker processes queue: push items → PushNotification.send() → PushClass.\nPushClass routing: if gateway mode → HTTP POST to cloud gateway; if native mode → sendAPN() for Apple / sendFCM() for Google Firebase.\nCan be disabled via Troubleshoot_Disable_Notifications setting."
+ },
+ {
+ "keywords": ["ApiClass", "APIClass", "addRoute", "createApi", "RocketChatAPIRouter", "authenticationHono", "permissionsMiddleware"],
+ "hint": "Architecture — REST API:\nAPI.v1 is created via createApi({ version:'v1', useDefaultAuth:true }). Routes registered via APIClass.addRoute() (legacy) or typed .get()/.post()/.put()/.delete() methods.\nFull middleware chain: WebApp.rawConnectHandlers → remoteAddressMiddleware → CORS → logger → metrics → tracerSpan → router dispatch → authenticationMiddlewareForHono → permissionsMiddleware → license check → route handler.\nauthenticationMiddleware validates x-user-id + x-auth-token headers or OAuth tokens.\nRoute handlers receive APIActionContext with this.bodyParams, this.queryParams, this.user, and return API.v1.success()/failure()."
+ },
+ {
+ "keywords": ["BaseRaw", "MessagesRaw", "registerModel", "IBaseModel", "UsersRaw"],
+ "hint": "Architecture — Database Models:\nAll models extend BaseRaw which wraps MongoDB collection operations (find, findOne, insertOne, updateOne, deleteOne, etc.).\nPattern: 1) define document interface in core-typings (extends IRocketChatRecord) → 2) define model interface in model-typings (extends IBaseModel) → 3) implement class extending BaseRaw in models package → 4) register via registerModel in server startup.\nModels are accessed via proxified imports: e.g., import { Messages } from '@rocket.chat/models' → proxify routes through LocalBroker.\nBaseRaw provides modelIndexes() override for MongoDB index definitions."
+ },
+ {
+ "keywords": ["RoutingManager", "QueueManager", "delegateInquiry", "takeInquiry", "OmnichannelService", "OmnichannelQueue", "closeRoom", "livechat", "requestRoom"],
+ "hint": "Architecture — Livechat / Omnichannel:\nNew conversation: QueueManager.requestRoom() creates room + inquiry in a transaction → processNewInquiry() checks inquiry status: if READY → RoutingManager.delegateInquiry() immediately; if QUEUED → saves to queue.\nRoutingManager.delegateInquiry() → routing strategy (AutoSelection, Manual, etc.) → takeInquiry() assigns agent → assignAgent() updates room.\nBackground queue: OmnichannelService starts OmnichannelQueue worker → execute() loop processes queued inquiries → calls RoutingManager.delegateInquiry().\nRoom closing: closeRoom() runs in a MongoDB transaction — closes room, removes inquiry, removes subscriptions, then afterRoomClosed() saves system message + triggers app events."
+ },
+ {
+ "keywords": ["registerLoginHandler", "authenticationMiddleware", "loginWithPassword", "loginWithLDAP", "LDAPManager", "LDAPService", "configureLDAP", "LDAPConnection"],
+ "hint": "Architecture — Authentication / LDAP:\nLogin: Meteor.loginWith*() → Accounts.registerLoginHandler dispatches to registered handlers.\nLDAP flow: configureLDAP() registers handler with Accounts.registerLoginHandler('ldap', fn) → checks for ldap flag in login request → calls LDAP.loginRequest(username, password) via core-services proxy → LDAPService.loginRequest() → LDAPManager.login().\nLDAPManager.login(): creates LDAPConnection → ldap.connect() → ldap.searchByUsername() → ldap.authenticate(dn, password) → checks group filter → finds/creates user in MongoDB → syncs avatar → returns {userId}.\nFallback: if LDAP fails and LDAP_Login_Fallback enabled → Accounts._runLoginHandlers() for default password auth.\nbeforeValidateLogin callback prevents password logins for LDAP users unless fallback is enabled."
+ },
+ {
+ "keywords": ["SettingsRegistry", "CachedSettings", "SettingsRaw"],
+ "hint": "Architecture — Settings:\nSettings are registered via SettingsRegistry.add() → stored in MongoDB via Settings model → cached in memory by CachedSettings (Map-based store with Emitter).\nClient access: Meteor methods 'public-settings/get' and 'private-settings/get'.\nServices watch settings via CachedSettings.watch(settingId, callback) or CachedSettings.watchByRegex(regex, callback). CachedSettings.change() for direct updates.\nSearch for \"SettingsRegistry\" to find registration, \"CachedSettings\" for the cache layer."
+ },
+ {
+ "keywords": ["LicenseManager", "LicenseImp", "hasModule", "onValidateLicense"],
+ "hint": "Architecture — Enterprise Licensing:\nLicenseManager validates license → LicenseImp handles implementation → modules are gated via hasModule() checks throughout the codebase.\nLicense changes emit events via onValidateLicense listeners. Enterprise features check hasModule() before enabling.\nLocated in ee/packages/license/."
+ },
+ {
+ "keywords": ["FederationMatrix", "processIncomingTransaction", "saveMessageFromFederation"],
+ "hint": "Architecture — Federation:\nOutgoing: FederationMatrix.sendMessage() → federationSDK.sendMessage() → Matrix protocol HTTP API to remote server.\nIncoming: PUT /_matrix/federation/v1/send/:txnId → federationSDK.processIncomingTransaction() → event emitter dispatches by type → event listeners (e.g., 'homeserver.matrix.message') process and persist to local DB.\nUses event-driven architecture internally, not direct function calls. Located in ee/packages/federation-matrix/."
+ },
+ {
+ "keywords": ["createRoom", "createChannel", "createDirectMessage", "createChannelMethod"],
+ "hint": "Architecture — Room Creation:\nDDP method createChannel → createChannelMethod validates params → calls createRoom().\ncreateRoom sequence: prepareCreateRoomCallback.run() → Apps Engine pre-hooks (IPreRoomCreatePrevent/Modify/Extend) → beforeCreateRoomCallback.run() → Rooms.createWithFullRoomData() → createUsersSubscriptions() → callbacks.runAsync('afterCreateChannel'/'afterCreatePrivateGroup'/'afterCreateRoom') → Apps.triggerEvent(IPostRoomCreate).\nDirect messages: createDirectMessage → createDirectRoom with type 'd'.\nRoomService (via proxify) also exposes create/createDirectMessage."
+ },
+ {
+ "keywords": ["uploadFiles", "FileUpload", "UploadsStore", "MultipartUploadHandler", "FileUploadClass"],
+ "hint": "Architecture — File Upload:\nClient: uploadFiles() handles file selection and upload UI.\nServer: two-step REST flow: 1) POST rooms.media/:rid uploads file to storage, 2) POST rooms.mediaConfirm/:rid/:fileId confirms upload and creates message with attachment.\nFileUploadClass processes files. Storage backends are pluggable: GridFS (default), S3, WebDAV, FileSystem.\nFile metadata stored in Uploads collection. sendFileMessage() creates the chat message with attachment reference."
+ },
+ {
+ "keywords": ["e2e", "E2E", "e2ee", "createAndLoadKeys", "createGroupKey", "Keychain", "resetRoomKey"],
+ "hint": "Architecture — E2E Encryption:\nAll client-side in apps/meteor/client/lib/e2ee/.\nE2E class: createAndLoadKeys() generates RSA key pair. Private key is encrypted using PBKDF2 key derivation (password → derived key) then AES-GCM encryption (derived key → encrypted private key).\nPer-room: E2ERoom.createGroupKey() generates AES session key, encrypts it with each member's RSA public key via encryptGroupKeyForParticipant().\nKeychain manages encrypted key storage using EncryptedKeyCodec. crypto/ has rsa.ts, aes.ts, pbkdf2.ts.\nServer enforces E2E_Enable and E2E_Allow_Unencrypted_Messages settings."
+ },
+ {
+ "keywords": ["checkCodeForUser", "TOTPCheck", "EmailCheck", "twoFactorRequired", "2fa", "PasswordCheckFallback"],
+ "hint": "Architecture — Two-Factor Authentication:\ntwoFactorRequired() is a middleware wrapper applied to sensitive methods/endpoints.\nWhen triggered: calls checkCodeForUser() which tries verification methods in order: TOTPCheck (authenticator app) → EmailCheck (email code) → PasswordCheckFallback.\nEach check implements ICodeCheck interface with verify() and isEnabled() methods.\nTOTP uses standard RFC 6238 time-based codes. Email sends a temporary code via Mailer."
+ },
+ {
+ "keywords": ["slashCommands", "processSlashCommand"],
+ "hint": "Architecture — Slash Commands:\nClient side: in sendMessage flow, processSlashCommand() parses message with regex /^\\/([^\\s]+)(.*)/ to detect commands.\nClient does NOT run commands directly — it calls sdk.call('slashCommand', { cmd, params, msg, triggerId }) which crosses DDP to the server.\nServer side: slashCommands registry has add() to register and run() to execute. Built-in commands (invite, kick, join, etc.) register via slashCommands.add()."
+ },
+ {
+ "keywords": ["executeIntegrationRest", "triggerHandler", "processWebhookMessage", "webhook", "integration"],
+ "hint": "Architecture — Webhooks / Integrations:\nIncoming: POST /hooks/:integrationId/:token → executeIntegrationRest() authenticates → runs integration script in isolated-vm sandbox → processWebhookMessage() creates message from webhook payload.\nOutgoing: triggerHandler listens for message events → matches configured triggers → executes outgoing webhook script → sends HTTP request to external URL.\nIntegration scripts run in isolated-vm for security. History tracked via updateHistory()."
+ },
+ {
+ "keywords": ["SearchProviderService", "SearchProvider", "DefaultProvider", "messageSearch"],
+ "hint": "Architecture — Message Search:\nSearchProviderService manages search providers. DefaultProvider uses MongoDB text search ($text index).\nPluggable: other providers (e.g., Elasticsearch) can be registered.\nClient calls search API → SearchProviderService.search() → active provider's search() method → returns results."
+ },
+ {
+ "keywords": ["TeamService", "ITeamService"],
+ "hint": "Architecture — Teams:\nTeamService extends ServiceClassInternal, accessed via proxify pattern.\nTeams are a layer above rooms — a team contains multiple channels. TeamService handles create, addMembers, removeMembers, listRooms.\nData stored in Team and TeamMember models (packages/models)."
+ },
+ {
+ "keywords": ["VideoConfService", "IVideoConfService", "VideoConfManager"],
+ "hint": "Architecture — Video Conference:\nVideoConfService extends ServiceClassInternal, accessed via proxify pattern.\nProviders are pluggable via videoConfProviders registry. Default providers integrate with Jitsi and others via Apps Engine.\nClient-side VideoConfManager handles call lifecycle (ring, accept, reject). isRoomCompatibleWithVideoConfRinging checks room eligibility."
+ },
+ {
+ "keywords": ["AutoTranslate", "TranslationProviderRegistry", "GoogleAutoTranslate", "translateMessage"],
+ "hint": "Architecture — Auto-Translate:\nRegistered as afterSaveMessage callback with MEDIUM priority.\nTranslationProviderRegistry manages providers: GoogleAutoTranslate, MSTranslate, DeepLTranslate.\nWhen enabled for a room: afterSaveMessage → provider.translateMessage() → stores translations in message.translations field.\nEach provider implements AutoTranslate base class with _translateMessage() method."
+ },
+ {
+ "keywords": ["Presence", "PresenceReaper", "setUserStatus", "online", "away", "offline", "StreamPresence", "userPresence"],
+ "hint": "Architecture — User Presence:\nPresence extends ServiceClass (EE package in ee/packages/presence/). Tracks online/away/offline status per connection.\nFlow: client calls setUserStatus() method → Presence.setStatus(uid, statusType) → broadcasts status change → StreamPresence delivers to subscribed clients.\nPresenceReaper cleans stale connections every 5 minutes (batch of 500). License-gated: unlimited-presence and scalability modules control broadcast behavior.\nCustom status: insertOrUpdateUserStatus() / deleteCustomUserStatus() methods."
+ },
+ {
+ "keywords": ["Importer", "ImportersContainer", "CsvImporter", "SlackImporter", "ImportDataConverter", "ImporterProgress"],
+ "hint": "Architecture — Data Import System:\nPlugin architecture: base Importer class → concrete importers (CsvImporter, SlackImporter, SlackUsersImporter, ContactImporter).\nImportersContainer is a registry — importers register via Importers.add(info).\nFlow: uploadImportFile() → prepareUsingLocalFile() (parse ZIP) → ImportDataConverter normalizes to RC format → user reviews selection → startImport() processes data.\nProgress tracked via ImporterProgress with WebSocket updates to UI. ZIP-based: all import data packaged as ZIP archives."
+ },
+ {
+ "keywords": ["Mailer", "sendNoWrap", "Email_Header", "Email_Footer", "email", "inlinecss"],
+ "hint": "Architecture — Email System:\nFunctional module (NOT class-based). Search for \"Mailer\" or \"sendNoWrap\" to find it.\nKey functions: send() wraps content with header/footer template + CSS inlining via juice, sendNoWrap() sends raw email.\nTemplate system: getTemplate() watches settings for Email_Header/Email_Footer, applies inlinecss() with debouncing.\nVariable replacement: replace() and replaceEscaped() for data interpolation.\nApps Engine integration: IPreEmailSent event hook before sending.\nUses Meteor's Email.sendAsync() under the hood."
+ },
+ {
+ "keywords": ["startRocketChat", "startup", "registerServices", "configureServer", "migration", "addMigration"],
+ "hint": "Architecture — Server Startup & Migrations:\nBoot order: main.ts → Promise.all([configureServer(settings), registerServices(), startup()]) → startRocketChat() → startRestAPI().\nMigrations: addMigration({ version, name, up() }) registers versioned DB migrations. Framework uses atomic MongoDB lock on migrations.control to prevent concurrent runs.\nonServerVersionChange() detects version upgrades for one-time tasks (permission upserts, cloud registration).\nFresh databases (version 0) skip all migrations."
+ }
+]
diff --git a/src/config.ts b/src/config.ts
index 987f8ca..1e8f0f0 100644
--- a/src/config.ts
+++ b/src/config.ts
@@ -8,10 +8,12 @@ const PROJECT_ROOT = path.resolve(__dirname, '..');
export const TARGET_SRC_DIR = process.env.ROCKET_CHAT_SRC
|| path.join(PROJECT_ROOT, '..', 'Rocket.Chat');
-export const OUTPUT_DIR = path.join(PROJECT_ROOT, 'output');
+// `.nosync` suffix → macOS iCloud (Desktop & Documents) skips this folder. The index is a large
+// (~50M, 15k files) regenerable build artifact; syncing it to iCloud wastes bandwidth and the
+// upload storm throttles the thousands of small-file reads during an index rebuild.
+export const OUTPUT_DIR = path.join(PROJECT_ROOT, 'output.nosync');
export const CACHE_FILE = path.join(OUTPUT_DIR, '.hash_cache.json');
export const GENERATOR_VERSION = '7';
-export const LOGS_DIR = path.join(PROJECT_ROOT, 'logs');
export function getOutputPaths(sourceFile: string): { skeletonPath: string; mappingPath: string } {
const rel = path.relative(TARGET_SRC_DIR, sourceFile).replace(/\.(tsx?|js)$/, '');
diff --git a/src/eval/agent-eval.ts b/src/eval/agent-eval.ts
deleted file mode 100644
index ba70d15..0000000
--- a/src/eval/agent-eval.ts
+++ /dev/null
@@ -1,637 +0,0 @@
-#!/usr/bin/env npx tsx
-import * as fs from 'fs';
-import * as path from 'path';
-import { fileURLToPath } from 'url';
-import { GoogleGenerativeAI, type FunctionDeclaration, type Part, SchemaType } from '@google/generative-ai';
-import { OUTPUT_DIR } from '../config.js';
-import { preWarmCache, initializeGlobalIndex, LocalDatabase } from '../indexer/index.js';
-import { handleToolCall } from '../server/registry.js';
-import { GLOBAL_INDEX } from '../indexer/state.js';
-
-const __dirname = path.dirname(fileURLToPath(import.meta.url));
-const PROJECT_ROOT = path.resolve(__dirname, '..', '..');
-
-interface TestCase {
- id: string;
- question: string;
- questionType: string;
- subsystem: string;
- difficulty: string;
- groundTruthFiles: string[];
- groundTruthPath?: Array<{ file: string; symbol: string }>;
- keySymbols?: string[];
-}
-
-interface ToolCallRecord {
- step: number;
- tool: string;
- args: Record;
- responseText: string;
- responseTokensEst: number;
-}
-
-interface FileHit {
- file: string;
- found: boolean;
- foundVia: string | null;
-}
-
-interface SymbolHit {
- symbol: string;
- inToolResults: boolean;
- inLLMAnswer: boolean;
-}
-
-interface JudgeScore {
- correctness: number;
- completeness: number;
- keyFiles: number;
- overall: number;
- strengths: string;
- weaknesses: string;
-}
-
-interface TestResult {
- id: string;
- question: string;
- questionType: string;
- subsystem: string;
- difficulty: string;
- toolCalls: ToolCallRecord[];
- llmAnswer: string;
- fileHits: FileHit[];
- symbolHits: SymbolHit[];
- tokens: { prompt: number; candidates: number; total: number };
- fileHitRate: number;
- symbolCoverageRate: number;
- judge: JudgeScore | null;
- pass: boolean;
-}
-
-const GEMINI_FUNCTIONS: FunctionDeclaration[] = [
- {
- name: 'search',
- description: 'Find symbols and files by name. Searches the symbol index and file paths simultaneously. Pass layer when the question specifies client/server/packages/ee. Start every investigation here.',
- parameters: {
- type: SchemaType.OBJECT,
- properties: {
- query: { type: SchemaType.STRING, description: 'Symbol name, filename, path fragment, or call pattern' },
- layer: { type: SchemaType.STRING, description: 'Restrict results to this layer: client, server, packages, or ee' },
- },
- required: ['query'],
- },
- },
- {
- name: 'graph',
- description: 'Traverse the full call graph. direction=up follows callers upstream, direction=down follows callees downstream. mode=impact shows blast radius layer-by-layer.',
- parameters: {
- type: SchemaType.OBJECT,
- properties: {
- query: { type: SchemaType.STRING, description: 'Symbol name or event name to start traversal from' },
- direction: { type: SchemaType.STRING, description: 'up or down' },
- depth: { type: SchemaType.NUMBER, description: 'Max traversal depth (default 4, max 6)' },
- layer: { type: SchemaType.STRING, description: 'Restrict to this layer' },
- mode: { type: SchemaType.STRING, description: 'tree or impact' },
- question: { type: SchemaType.STRING, description: 'Original user question for semantic pruning' },
- },
- required: ['query'],
- },
- },
- {
- name: 'implement',
- description: 'Read the full source implementation of a specific symbol, plus callee skeletons. filename is REQUIRED.',
- parameters: {
- type: SchemaType.OBJECT,
- properties: {
- symbolName: { type: SchemaType.STRING, description: 'Symbol name' },
- filename: { type: SchemaType.STRING, description: 'Exact file path from search/graph results' },
- },
- required: ['symbolName', 'filename'],
- },
- },
-];
-
-function extractToolResultText(result: any): string {
- return result?.content?.[0]?.text ?? '';
-}
-
-function fileMatches(text: string, gtFile: string): boolean {
- if (text.includes(gtFile)) return true;
- const basename = path.basename(gtFile);
- const dir = path.basename(path.dirname(gtFile));
- if (text.includes(`${dir}/${basename}`)) return true;
- const noExt = basename.replace(/\.(tsx?|js)$/, '');
- if (text.includes(`${dir}/${noExt}`)) return true;
- return false;
-}
-
-function symbolMatches(text: string, symbol: string): boolean {
- const escaped = symbol.replace(/[.*+?^${}()|[\]\\]/g, '\\$&');
- return new RegExp(`\\b${escaped}\\b`).test(text);
-}
-
-async function runTestCase(
- model: any,
- tc: TestCase,
-): Promise {
- const toolCalls: ToolCallRecord[] = [];
- let totalPrompt = 0;
- let totalCandidates = 0;
- let totalTokens = 0;
- let step = 0;
-
- const chat = model.startChat({
- history: [],
- });
-
- let response = await chat.sendMessage(tc.question);
- if (response.response.usageMetadata) {
- totalPrompt += response.response.usageMetadata.promptTokenCount ?? 0;
- totalCandidates += response.response.usageMetadata.candidatesTokenCount ?? 0;
- totalTokens += response.response.usageMetadata.totalTokenCount ?? 0;
- }
-
- const MAX_TURNS = 12;
- const MAX_TOOL_CALLS = 8;
- let turns = 0;
-
- while (turns < MAX_TURNS) {
- const candidate = response.response.candidates?.[0];
- if (!candidate) break;
-
- const fnCalls = candidate.content?.parts?.filter((p: any) => p.functionCall) ?? [];
- if (fnCalls.length === 0) break;
-
- if (step >= MAX_TOOL_CALLS) {
- response = await chat.sendMessage('You have used all available tool calls. Please provide your final answer now based on the information you have gathered.');
- if (response.response.usageMetadata) {
- totalPrompt += response.response.usageMetadata.promptTokenCount ?? 0;
- totalCandidates += response.response.usageMetadata.candidatesTokenCount ?? 0;
- totalTokens += response.response.usageMetadata.totalTokenCount ?? 0;
- }
- break;
- }
-
- const fnResponses: Part[] = [];
- for (const part of fnCalls) {
- const fc = part.functionCall!;
- step++;
-
- const toolResult = await handleToolCall(fc.name, fc.args ?? {});
- const resultText = extractToolResultText(toolResult);
-
- toolCalls.push({
- step,
- tool: fc.name,
- args: fc.args ?? {},
- responseText: resultText,
- responseTokensEst: Math.ceil(resultText.length / 4),
- });
-
- fnResponses.push({
- functionResponse: {
- name: fc.name,
- response: { content: resultText },
- },
- } as any);
- }
-
- response = await chat.sendMessage(fnResponses);
- if (response.response.usageMetadata) {
- totalPrompt += response.response.usageMetadata.promptTokenCount ?? 0;
- totalCandidates += response.response.usageMetadata.candidatesTokenCount ?? 0;
- totalTokens += response.response.usageMetadata.totalTokenCount ?? 0;
- }
- turns++;
- }
-
- const llmAnswer = response.response.candidates?.[0]?.content?.parts
- ?.filter((p: any) => p.text)
- ?.map((p: any) => p.text)
- ?.join('\n') ?? '';
-
- const allToolText = toolCalls.map(t => t.responseText).join('\n');
- const allText = allToolText + '\n' + llmAnswer;
-
- const fileHits: FileHit[] = tc.groundTruthFiles.map(f => {
- let foundVia: string | null = null;
- for (const tc2 of toolCalls) {
- if (fileMatches(tc2.responseText, f) || fileMatches(JSON.stringify(tc2.args), f)) {
- foundVia = `${tc2.tool} (step ${tc2.step})`;
- break;
- }
- }
- if (!foundVia && fileMatches(llmAnswer, f)) {
- foundVia = 'LLM answer';
- }
- return { file: f, found: foundVia !== null, foundVia };
- });
-
- const symbolHits: SymbolHit[] = (tc.keySymbols ?? []).map(sym => ({
- symbol: sym,
- inToolResults: symbolMatches(allToolText, sym),
- inLLMAnswer: symbolMatches(llmAnswer, sym),
- }));
-
- const fileHitRate = tc.groundTruthFiles.length > 0
- ? fileHits.filter(f => f.found).length / tc.groundTruthFiles.length : 1;
- const symTotal = symbolHits.length;
- const symFound = symbolHits.filter(s => s.inToolResults || s.inLLMAnswer).length;
- const symbolCoverageRate = symTotal > 0 ? symFound / symTotal : 1;
-
- const pass = fileHitRate >= 0.8 && symbolCoverageRate >= 0.8;
-
- return {
- id: tc.id,
- question: tc.question,
- questionType: tc.questionType,
- subsystem: tc.subsystem,
- difficulty: tc.difficulty,
- toolCalls,
- llmAnswer,
- fileHits,
- symbolHits,
- tokens: { prompt: totalPrompt, candidates: totalCandidates, total: totalTokens },
- fileHitRate,
- symbolCoverageRate,
- judge: null,
- pass,
- };
-}
-
-function saveGeminiAnswers(results: TestResult[]) {
- const dir = path.join(PROJECT_ROOT, 'logs', 'gemini-answers');
- fs.mkdirSync(dir, { recursive: true });
-
- for (const r of results) {
- const toolTrace = r.toolCalls.map(tc =>
- `**Step ${tc.step}:** \`${tc.tool}(${JSON.stringify(tc.args).substring(0, 100)})\` → ${tc.responseTokensEst} tokens`
- ).join('\n');
-
- const content = `# ${r.question}
-
-## Gemini Answer
-
-${r.llmAnswer}
-
-## Tool Calls (${r.toolCalls.length} calls, ${r.tokens.total.toLocaleString()} tokens)
-
-${toolTrace}
-
-## Metrics
-
-| Metric | Value |
-|--------|-------|
-| Files hit | ${r.fileHits.filter(f => f.found).length}/${r.fileHits.length} |
-| Symbols hit | ${r.symbolHits.filter(s => s.inToolResults || s.inLLMAnswer).length}/${r.symbolHits.length} |
-| Tool calls | ${r.toolCalls.length} |
-| Total tokens | ${r.tokens.total.toLocaleString()} |
-`;
- fs.writeFileSync(path.join(dir, `${r.id}.md`), content, 'utf-8');
- }
-}
-
-function loadLayer1Results(): Map | null {
- const l1Path = path.join(PROJECT_ROOT, 'logs', 'tool-eval.md');
- if (!fs.existsSync(l1Path)) return null;
- const content = fs.readFileSync(l1Path, 'utf-8');
- const map = new Map();
- for (const line of content.split('\n')) {
- const m = line.match(/\|\s*\d+\s*\|\s*(\S+)\s*\|.*\|\s*(PASS|\*\*FAIL\*\*)\s*\|/);
- if (m) map.set(m[1], m[2] === 'PASS');
- }
- return map.size > 0 ? map : null;
-}
-
-function formatReport(results: TestResult[], l1: Map | null): string {
- const L: string[] = [];
- const passed = results.filter(r => r.pass).length;
- const total = results.length;
-
- L.push(`# Layer 2 — Agent Eval Report\n`);
- L.push(`${new Date().toLocaleString('en-US')} | Model: gemini-2.5-flash | Testcases: ${total}\n`);
- L.push(`---\n`);
-
- // Section 1: Overall Summary
- L.push(`## 1. Overall Summary\n`);
- const avgFileHit = results.reduce((s, r) => s + r.fileHitRate, 0) / total;
- const avgSymCov = results.reduce((s, r) => s + r.symbolCoverageRate, 0) / total;
- const avgTools = results.reduce((s, r) => s + r.toolCalls.length, 0) / total;
- const avgTokens = results.reduce((s, r) => s + r.tokens.total, 0) / total;
- const totalTokens = results.reduce((s, r) => s + r.tokens.total, 0);
-
- const emptyAnswers = results.filter(r => r.llmAnswer.trim().split(/\s+/).length < 10).length;
- const goodAnswers = results.filter(r => {
- const words = r.llmAnswer.trim().split(/\s+/).length;
- const paths = (r.llmAnswer.match(/apps\/meteor\/|packages\/|ee\//g) || []).length;
- return words >= 10 && paths >= 3;
- }).length;
- const weakAnswers = total - emptyAnswers - goodAnswers;
-
- L.push(`| Metric | Value |`);
- L.push(`|--------|-------|`);
- L.push(`| **Good answers (3+ file paths)** | **${goodAnswers}/${total} (${(goodAnswers / total * 100).toFixed(1)}%)** |`);
- L.push(`| Weak answers (has content, <3 paths) | ${weakAnswers}/${total} |`);
- L.push(`| Empty answers | ${emptyAnswers}/${total} |`);
- L.push(`| File hit rate (avg, string match) | ${(avgFileHit * 100).toFixed(1)}% |`);
- L.push(`| Symbol coverage (avg, string match) | ${(avgSymCov * 100).toFixed(1)}% |`);
- L.push(`| Avg tool calls / question | ${avgTools.toFixed(1)} |`);
- L.push(`| Avg tokens / question | ${Math.round(avgTokens).toLocaleString()} |`);
- L.push(`| Total tokens (all ${total}) | ${totalTokens.toLocaleString()} |`);
- L.push(`| Free tier limit | 1,000,000 TPM |`);
- L.push(`| Within free tier? | ${totalTokens < 1_000_000 ? 'YES' : 'NO'} (${(totalTokens / 1_000_000 * 100).toFixed(1)}% used) |`);
- L.push('');
-
- // Section 2: Accuracy by Dimension
- L.push(`## 2. Accuracy by Dimension\n`);
-
- L.push(`### By Question Type`);
- L.push(`| Type | Count | Passed | Rate |`);
- L.push(`|------|-------|--------|------|`);
- const byType = new Map();
- for (const r of results) {
- const e = byType.get(r.questionType) ?? { total: 0, passed: 0 };
- e.total++; if (r.pass) e.passed++;
- byType.set(r.questionType, e);
- }
- for (const [type, { total: t, passed: p }] of byType) {
- L.push(`| ${type} | ${t} | ${p} | ${(p / t * 100).toFixed(1)}% |`);
- }
- L.push('');
-
- L.push(`### By Subsystem`);
- L.push(`| Subsystem | Count | Passed | Rate |`);
- L.push(`|-----------|-------|--------|------|`);
- const bySub = new Map();
- for (const r of results) {
- const e = bySub.get(r.subsystem) ?? { total: 0, passed: 0 };
- e.total++; if (r.pass) e.passed++;
- bySub.set(r.subsystem, e);
- }
- for (const [sub, { total: t, passed: p }] of bySub) {
- L.push(`| ${sub} | ${t} | ${p} | ${(p / t * 100).toFixed(1)}% |`);
- }
- L.push('');
-
- L.push(`### By Difficulty`);
- L.push(`| Difficulty | Count | Passed | Rate |`);
- L.push(`|------------|-------|--------|------|`);
- const byDiff = new Map();
- for (const r of results) {
- const e = byDiff.get(r.difficulty) ?? { total: 0, passed: 0 };
- e.total++; if (r.pass) e.passed++;
- byDiff.set(r.difficulty, e);
- }
- for (const [diff, { total: t, passed: p }] of byDiff) {
- L.push(`| ${diff} | ${t} | ${p} | ${(p / t * 100).toFixed(1)}% |`);
- }
- L.push('');
-
- // Section 3: Token Analysis
- L.push(`## 3. Token Analysis\n`);
- L.push(`### Per-Question Token Distribution`);
- L.push(`| # | ID | Input | Output | Total | Tool Calls |`);
- L.push(`|---|---|------:|-------:|------:|-----------:|`);
- for (let i = 0; i < results.length; i++) {
- const r = results[i];
- L.push(`| ${i + 1} | ${r.id} | ${r.tokens.prompt.toLocaleString()} | ${r.tokens.candidates.toLocaleString()} | ${r.tokens.total.toLocaleString()} | ${r.toolCalls.length} |`);
- }
- L.push('');
-
- L.push(`### Token Breakdown by Tool`);
- const toolStats = new Map();
- for (const r of results) {
- for (const tc of r.toolCalls) {
- const e = toolStats.get(tc.tool) ?? { count: 0, totalTokens: 0 };
- e.count++; e.totalTokens += tc.responseTokensEst;
- toolStats.set(tc.tool, e);
- }
- }
- L.push(`| Tool | Times Called | Avg Response Tokens | Total |`);
- L.push(`|------|------------:|--------------------:|------:|`);
- for (const [tool, { count, totalTokens: tt }] of toolStats) {
- L.push(`| ${tool} | ${count} | ${Math.round(tt / count).toLocaleString()} | ${tt.toLocaleString()} |`);
- }
- L.push('');
-
- const mostExpensive = results.reduce((a, b) => a.tokens.total > b.tokens.total ? a : b);
- const cheapest = results.reduce((a, b) => a.tokens.total < b.tokens.total ? a : b);
- const implTokens = Array.from(toolStats.entries()).find(([k]) => k === 'implement')?.[1]?.totalTokens ?? 0;
- const allToolTokens = Array.from(toolStats.values()).reduce((s, v) => s + v.totalTokens, 0);
- const implShare = allToolTokens > 0 ? implTokens / allToolTokens * 100 : 0;
- const over10 = results.filter(r => r.toolCalls.length > 10).length;
-
- L.push(`### Token Efficiency`);
- L.push(`| Metric | Value |`);
- L.push(`|--------|-------|`);
- L.push(`| Most expensive question | ${mostExpensive.id} (${mostExpensive.tokens.total.toLocaleString()} tokens, ${mostExpensive.toolCalls.length} tool calls) |`);
- L.push(`| Cheapest question | ${cheapest.id} (${cheapest.tokens.total.toLocaleString()} tokens, ${cheapest.toolCalls.length} tool calls) |`);
- L.push(`| implement share of tool tokens | ${implShare.toFixed(1)}% ${implShare > 30 ? '(above 30% threshold)' : ''} |`);
- L.push(`| Questions exceeding 10 tool calls | ${over10} |`);
- L.push('');
-
- // Section 4: Per-Testcase Details
- L.push(`## 4. Per-Testcase Results\n`);
- L.push(`| # | ID | Subsystem | Files | Symbols | Tools | Tokens | Pass |`);
- L.push(`|---|---|---|---|---|---|---|---|`);
- for (let i = 0; i < results.length; i++) {
- const r = results[i];
- const fh = `${r.fileHits.filter(f => f.found).length}/${r.fileHits.length}`;
- const sh = `${r.symbolHits.filter(s => s.inToolResults || s.inLLMAnswer).length}/${r.symbolHits.length}`;
- const status = r.pass ? 'PASS' : '**FAIL**';
- L.push(`| ${i + 1} | ${r.id} | ${r.subsystem} | ${fh} | ${sh} | ${r.toolCalls.length} | ${r.tokens.total.toLocaleString()} | ${status} |`);
- }
- L.push('');
-
- // Section 5: Detailed per-testcase
- L.push(`## 5. Per-Testcase Details\n`);
- for (let i = 0; i < results.length; i++) {
- const r = results[i];
- const status = r.pass ? 'PASS' : 'FAIL';
- L.push(`### #${i + 1} ${r.id} — ${status}\n`);
- L.push(`**Q:** ${r.question}`);
- L.push(`**Type:** ${r.questionType} | **Subsystem:** ${r.subsystem} | **Difficulty:** ${r.difficulty}\n`);
-
- L.push(`**Tool Call Trace:**\n`);
- L.push(`| Step | Tool | Args | Tokens |`);
- L.push(`|------|------|------|-------:|`);
- for (const tc of r.toolCalls) {
- const argsStr = JSON.stringify(tc.args).substring(0, 80);
- L.push(`| ${tc.step} | ${tc.tool} | \`${argsStr}\` | ${tc.responseTokensEst} |`);
- }
- L.push('');
-
- L.push(`**File Hits:**\n`);
- L.push(`| Expected File | Found? | Found Via |`);
- L.push(`|---------------|--------|-----------|`);
- for (const f of r.fileHits) {
- L.push(`| \`${f.file}\` | ${f.found ? 'YES' : '**NO**'} | ${f.foundVia ?? '-'} |`);
- }
- L.push('');
-
- if (r.symbolHits.length > 0) {
- L.push(`**Symbol Coverage:**\n`);
- L.push(`| Symbol | In Tool Results? | In LLM Answer? |`);
- L.push(`|--------|-----------------|----------------|`);
- for (const s of r.symbolHits) {
- L.push(`| \`${s.symbol}\` | ${s.inToolResults ? 'YES' : '**NO**'} | ${s.inLLMAnswer ? 'YES' : '**NO**'} |`);
- }
- L.push('');
- }
-
- const answerTrunc = r.llmAnswer;
- L.push(`**LLM Answer (truncated):**\n`);
- L.push(`> ${answerTrunc.replace(/\n/g, '\n> ')}\n`);
-
- if (!r.pass) {
- L.push(`**Root Cause Analysis:**\n`);
- const missedFiles = r.fileHits.filter(f => !f.found);
- const missedSymbols = r.symbolHits.filter(s => !s.inToolResults && !s.inLLMAnswer);
-
- if (missedFiles.length > 0) {
- L.push(`| Problem | Category | Detail |`);
- L.push(`|---------|----------|--------|`);
- for (const f of missedFiles) {
- const basename = path.basename(f.file);
- const inIndex = GLOBAL_INDEX.allFiles.has(f.file) ||
- Array.from(GLOBAL_INDEX.allFiles).some(p => p.endsWith(f.file));
- if (!inIndex) {
- L.push(`| \`${basename}\` not found | **Not in index** | File is not a .ts/.tsx or was excluded from scanning |`);
- } else {
- L.push(`| \`${basename}\` not found | **Search/LLM gap** | File is in index but search didn't surface it, or LLM didn't look for it |`);
- }
- }
- for (const s of missedSymbols) {
- const inSymbols = GLOBAL_INDEX.symbols.has(s.symbol);
- if (!inSymbols) {
- L.push(`| \`${s.symbol}\` missing | **Not in symbol index** | Symbol not extracted by skeleton.ts |`);
- } else {
- L.push(`| \`${s.symbol}\` missing | **LLM didn't mention** | Symbol exists in index but LLM never searched for it or mentioned it |`);
- }
- }
- L.push('');
- }
- }
-
- L.push(`---\n`);
- }
-
- // Section 6: Fault Isolation
- if (l1) {
- L.push(`## 6. Fault Isolation (Layer 1 vs Layer 2)\n`);
- L.push(`| # | ID | Subsystem | L1 | L2 | Diagnosis |`);
- L.push(`|---|---|---|---|---|---|`);
-
- let bothPass = 0, indexBug = 0, llmBug = 0, altRoute = 0, gtBroad = 0;
- for (let i = 0; i < results.length; i++) {
- const r = results[i];
- const l1pass = l1.get(r.id);
- if (l1pass === undefined) continue;
- const l2pass = r.pass;
- let diagnosis: string;
- if (l1pass && l2pass) { diagnosis = 'OK'; bothPass++; }
- else if (!l1pass && !l2pass) { diagnosis = '**Index/graph bug**'; indexBug++; }
- else if (l1pass && !l2pass) { diagnosis = '**LLM navigation bug** — fix AGENTS.md'; llmBug++; }
- else { diagnosis = 'LLM found alt route'; altRoute++; }
- L.push(`| ${i + 1} | ${r.id} | ${r.subsystem} | ${l1pass ? 'PASS' : 'FAIL'} | ${l2pass ? 'PASS' : '**FAIL**'} | ${diagnosis} |`);
- }
- L.push('');
-
- L.push(`### Diagnosis Summary`);
- L.push(`| Diagnosis | Count |`);
- L.push(`|-----------|------:|`);
- L.push(`| Both pass | ${bothPass} |`);
- L.push(`| Index/graph bug (L1+L2 fail) | ${indexBug} |`);
- L.push(`| LLM navigation bug (L1 pass, L2 fail) | ${llmBug} |`);
- L.push(`| LLM found alt route (L1 fail, L2 pass) | ${altRoute} |`);
- L.push('');
- }
-
- return L.join('\n');
-}
-
-async function main() {
- const apiKey = process.env.GEMINI_API_KEY;
- if (!apiKey) {
- console.error('GEMINI_API_KEY not set. Export it and retry.');
- process.exit(1);
- }
-
- console.error('Loading index...');
- if (!fs.existsSync(OUTPUT_DIR)) fs.mkdirSync(OUTPUT_DIR, { recursive: true });
- const { updatedCount } = preWarmCache();
- const db = new LocalDatabase(OUTPUT_DIR);
- if (updatedCount > 0 || !db.loadIndex(GLOBAL_INDEX)) {
- initializeGlobalIndex();
- db.saveIndex(GLOBAL_INDEX);
- }
- console.error(`Index ready: ${GLOBAL_INDEX.symbols.size} symbols, ${GLOBAL_INDEX.allFiles.size} files.\n`);
-
- const agentsMd = fs.readFileSync(path.join(PROJECT_ROOT, 'AGENTS.md'), 'utf-8');
-
- const genAI = new GoogleGenerativeAI(apiKey);
- const modelName = process.argv.find(a => a.startsWith('--model='))?.split('=')[1] ?? 'gemini-2.5-flash';
- const model = genAI.getGenerativeModel({
- model: modelName,
- tools: [{ functionDeclarations: GEMINI_FUNCTIONS }],
- systemInstruction: { role: 'user', parts: [{ text: agentsMd }] },
- });
-
- const testcases: TestCase[] = JSON.parse(
- fs.readFileSync(path.join(__dirname, 'testcases.json'), 'utf-8')
- );
- const filter = process.argv.find(a => a.startsWith('--filter='));
- const filterVal = filter?.split('=')[1]?.toLowerCase();
- const selected = filterVal
- ? testcases.filter(t => t.id.toLowerCase().includes(filterVal) || t.subsystem.toLowerCase().includes(filterVal))
- : testcases;
-
- console.error(`Running ${selected.length} test cases with ${modelName}...\n`);
-
- const results: TestResult[] = [];
- for (let i = 0; i < selected.length; i++) {
- const tc = selected[i];
- process.stderr.write(` [${i + 1}/${selected.length}] ${tc.id}... `);
- try {
- const result = await runTestCase(model, tc);
- console.error(`${result.pass ? 'PASS' : 'FAIL'} (${result.toolCalls.length} calls, ${result.tokens.total} tokens)`);
- results.push(result);
-
- // rate limit: free tier is 15 RPM for flash
- if (i < selected.length - 1) {
- await new Promise(r => setTimeout(r, 4500));
- }
- } catch (e: any) {
- console.error(`ERROR: ${e?.message?.slice(0, 100)}`);
- results.push({
- id: tc.id, question: tc.question, questionType: tc.questionType,
- subsystem: tc.subsystem, difficulty: tc.difficulty,
- toolCalls: [], llmAnswer: `ERROR: ${e?.message}`,
- fileHits: tc.groundTruthFiles.map(f => ({ file: f, found: false, foundVia: null })),
- symbolHits: (tc.keySymbols ?? []).map(s => ({ symbol: s, inToolResults: false, inLLMAnswer: false })),
- tokens: { prompt: 0, candidates: 0, total: 0 },
- fileHitRate: 0, symbolCoverageRate: 0, judge: null, pass: false,
- });
- await new Promise(r => setTimeout(r, 5000));
- }
- }
-
- saveGeminiAnswers(results);
- console.error(`Gemini answers saved to logs/gemini-answers/`);
-
- const l1 = loadLayer1Results();
- const report = formatReport(results, l1);
-
- const logsDir = path.join(PROJECT_ROOT, 'logs');
- fs.mkdirSync(logsDir, { recursive: true });
- const reportPath = path.join(logsDir, 'agent-eval.md');
- fs.writeFileSync(reportPath, report, 'utf-8');
-
- console.error(`Report: ${reportPath}`);
- const passed = results.filter(r => r.pass).length;
- const totalTokens = results.reduce((s, r) => s + r.tokens.total, 0);
- console.log(`\n${passed}/${results.length} passed | ${totalTokens.toLocaleString()} total tokens`);
- if (passed < results.length) process.exitCode = 1;
-}
-
-main().catch(e => { console.error('Fatal:', e); process.exit(2); });
diff --git a/src/eval/eval-1-nomcp-vs-mcp.ts b/src/eval/eval-1-nomcp-vs-mcp.ts
new file mode 100644
index 0000000..1db577e
--- /dev/null
+++ b/src/eval/eval-1-nomcp-vs-mcp.ts
@@ -0,0 +1,65 @@
+#!/usr/bin/env npx tsx
+/**
+ * eval-1 — Does MCP help? Gemini without MCP vs Gemini + MCP (self-loop).
+ * Deterministic (no Gemini/key): coverage of {core files ∪ key symbols} + token cost.
+ * Semantic "is the MCP answer actually better" is added by Claude into the report.
+ * Run: npm run eval:1
+ */
+import * as fs from 'fs';
+import * as path from 'path';
+import { fileURLToPath } from 'url';
+import { loadTestcases } from './utils/load-testcases.js';
+import { coverage, readSection, tokensOf } from './utils/eval-util.js';
+
+const __dirname = path.dirname(fileURLToPath(import.meta.url));
+const PROJECT_ROOT = path.resolve(__dirname, '..', '..');
+const LOGS = path.join(PROJECT_ROOT, 'logs');
+const D_NOMCP = path.join(LOGS, 'answers-gemini-nomcp');
+const D_MCP = path.join(LOGS, 'answers-gemini-mcp-selfloop');
+
+function main() {
+ const { flat: testcases } = loadTestcases(path.join(__dirname, 'utils', 'testcases.json'));
+ const rows = testcases.map(tc => {
+ const core = (tc.core && tc.core.length ? tc.core : tc.groundTruthFiles) ?? [];
+ const syms = tc.keySymbols ?? [];
+ const a0 = readSection(path.join(D_NOMCP, `${tc.id}.md`), '## Baseline Answer (no tools)', ['## Metrics']);
+ const a2 = readSection(path.join(D_MCP, `${tc.id}.md`), '## Gemini Answer', ['## Tool Calls']);
+ return {
+ id: tc.id, type: tc.questionType,
+ cov0: coverage(a0, core, syms),
+ cov2: coverage(a2, core, syms),
+ tok0: tokensOf(path.join(D_NOMCP, `${tc.id}.md`), /\| Tokens \| ([\d,]+) \|/),
+ tok2: tokensOf(path.join(D_MCP, `${tc.id}.md`), /## Tool Calls \(\d+ calls, ([\d,]+) tokens\)/),
+ };
+ });
+ const n = rows.length;
+ const avg = (f: (r: typeof rows[0]) => number) => rows.reduce((s, r) => s + f(r), 0) / n;
+ const avgCov0 = avg(r => r.cov0), avgCov2 = avg(r => r.cov2);
+ const avgTok0 = avg(r => r.tok0), avgTok2 = avg(r => r.tok2);
+ const improved = rows.filter(r => r.cov2 > r.cov0).length;
+
+ const L: string[] = [];
+ L.push(`# eval-1 — Does MCP help? (Gemini no-MCP vs Gemini + MCP)\n`);
+ L.push(`${new Date().toLocaleString('en-US')} | ${n} testcases | deterministic, no Gemini/key\n`);
+ L.push(`Coverage = answer mentions of {core files ∪ key symbols}. Semantic comparison (is the MCP answer better) is added by Claude.\n`);
+ L.push(`| Metric | no MCP | with MCP | change |`);
+ L.push(`|---|---:|---:|---|`);
+ L.push(`| Avg coverage | ${(avgCov0 * 100).toFixed(1)}% | ${(avgCov2 * 100).toFixed(1)}% | ${avgCov2 >= avgCov0 ? '+' : ''}${((avgCov2 - avgCov0) * 100).toFixed(1)} pts |`);
+ L.push(`| Questions improved | — | — | ${improved}/${n} |`);
+ L.push(`| Avg tokens / question | ${Math.round(avgTok0).toLocaleString()} | ${Math.round(avgTok2).toLocaleString()} | ×${(avgTok2 / Math.max(1, avgTok0)).toFixed(1)} |`);
+ L.push('');
+ L.push(`> MCP lifts coverage ${(avgCov0 * 100).toFixed(0)}% → ${(avgCov2 * 100).toFixed(0)}% at ×${(avgTok2 / Math.max(1, avgTok0)).toFixed(1)} token cost.\n`);
+ L.push(`| # | id | type | cov no-MCP | cov MCP | Δ | tok no-MCP | tok MCP |`);
+ L.push(`|---|---|---|---:|---:|---:|---:|---:|`);
+ rows.forEach((r, i) => {
+ const d = (r.cov2 - r.cov0) * 100;
+ L.push(`| ${i + 1} | ${r.id} | ${r.type} | ${(r.cov0 * 100).toFixed(0)}% | ${(r.cov2 * 100).toFixed(0)}% | ${d >= 0 ? '+' : ''}${d.toFixed(0)} | ${r.tok0.toLocaleString()} | ${r.tok2.toLocaleString()} |`);
+ });
+ L.push('');
+
+ fs.writeFileSync(path.join(LOGS, 'eval-1-nomcp-vs-mcp-agent.md'), L.join('\n'), 'utf-8');
+ console.error(`Wrote logs/eval-1-nomcp-vs-mcp-agent.md`);
+ console.log(`eval-1: coverage ${(avgCov0 * 100).toFixed(0)}%→${(avgCov2 * 100).toFixed(0)}%, token ×${(avgTok2 / Math.max(1, avgTok0)).toFixed(1)}, ${improved}/${n} improved`);
+}
+
+main();
diff --git a/src/eval/eval-2-mcp-tools.ts b/src/eval/eval-2-mcp-tools.ts
new file mode 100644
index 0000000..e144967
--- /dev/null
+++ b/src/eval/eval-2-mcp-tools.ts
@@ -0,0 +1,477 @@
+#!/usr/bin/env npx tsx
+import * as fs from 'fs';
+import * as path from 'path';
+import { fileURLToPath } from 'url';
+import { ensureIndex } from '../indexer/index.js';
+import { handleToolCall } from '../server/registry.js';
+import { CodeRetriever } from '../server/retriever.js';
+import { GLOBAL_INDEX } from '../indexer/state.js';
+import { loadTestcases, type TestCase } from './utils/load-testcases.js';
+
+const __dirname = path.dirname(fileURLToPath(import.meta.url));
+
+// Track A — ranking quality of the search tool (precision / recall@k / MRR).
+interface RetrievalMetrics {
+ primaryQuery: string;
+ rankedDepth: number;
+ coreRanks: { file: string; rank: number | null }[];
+ recallAt5: number;
+ recallAt10: number;
+ recallAt20: number;
+ mrr: number;
+ precisionAt5: number;
+ f1At5: number;
+ diagnosis: 'ok' | 'ranked-low' | 'recall-miss' | 'mixed' | 'n/a';
+}
+
+// Chain-order quality (LCS). Only meaningful for questions flagged `ordered`.
+interface OrderMetric {
+ applicable: boolean; // ordered question with a chain length > 1
+ expectedChain: string[]; // ground-truth chain symbols, in order
+ observedChain: string[]; // chain symbols sorted by first appearance in graph(down) output
+ lcs: number; // longest common subsequence length (expected vs observed)
+ score: number; // lcs / expectedChain.length, 0..1 (partial credit)
+}
+
+interface TestResult {
+ id: string;
+ question: string;
+ subsystem: string;
+ searchFileRecall: { found: string[]; missed: string[]; rate: number };
+ searchSymbolRecall: { found: string[]; missed: string[]; rate: number };
+ graphReachability: { found: string[]; missed: string[]; rate: number } | null;
+ order: OrderMetric;
+ retrieval: RetrievalMetrics;
+ pass: boolean;
+}
+
+function pathMatchesGt(rankedPath: string, gtFile: string): boolean {
+ const a = rankedPath.replace(/\\/g, '/');
+ const b = gtFile.replace(/\\/g, '/');
+ if (a === b || a.endsWith(b)) return true;
+ const aNoExt = a.replace(/\.(tsx?|js)$/, '');
+ const bNoExt = b.replace(/\.(tsx?|js)$/, '');
+ return aNoExt.endsWith(bNoExt);
+}
+
+// Longest common subsequence length between two symbol sequences (for chain-order scoring).
+function lcsLength(a: string[], b: string[]): number {
+ const m = a.length, n = b.length;
+ if (m === 0 || n === 0) return 0;
+ const dp: number[] = new Array(n + 1).fill(0);
+ for (let i = 1; i <= m; i++) {
+ let prev = 0;
+ for (let j = 1; j <= n; j++) {
+ const tmp = dp[j];
+ dp[j] = a[i - 1] === b[j - 1] ? prev + 1 : Math.max(dp[j], dp[j - 1]);
+ prev = tmp;
+ }
+ }
+ return dp[n];
+}
+
+// First index where `symbol` appears as a whole word, or -1.
+function firstSymbolIndex(text: string, symbol: string): number {
+ const escaped = symbol.replace(/[.*+?^${}()|[\]\\]/g, '\\$&');
+ const m = new RegExp(`\\b${escaped}\\b`).exec(text);
+ return m ? m.index : -1;
+}
+
+// Run the *primary* search query and measure how well it ranks the core GT files.
+function computeRetrievalMetrics(tc: TestCase): RetrievalMetrics {
+ const core = (tc.core && tc.core.length ? tc.core : tc.groundTruthFiles) ?? [];
+ const supporting = tc.supporting ?? [];
+ const gtAll = Array.from(new Set([...core, ...supporting]));
+
+ const primaryQuery =
+ tc.groundTruthPath?.[0]?.symbol ??
+ tc.keySymbols?.[0] ??
+ path.basename((tc.groundTruthFiles?.[0] ?? '')).replace(/\.(tsx?|js)$/, '');
+
+ const empty: RetrievalMetrics = {
+ primaryQuery, rankedDepth: 0, coreRanks: core.map(f => ({ file: f, rank: null })),
+ recallAt5: 0, recallAt10: 0, recallAt20: 0, mrr: 0, precisionAt5: 0, f1At5: 0, diagnosis: 'n/a',
+ };
+ if (!primaryQuery || core.length === 0) return empty;
+
+ const results = CodeRetriever.search(primaryQuery, 50);
+ const rankedFiles: string[] = [];
+ const seen = new Set();
+ for (const r of results) {
+ for (const p of ((r.paths ?? []) as string[])) {
+ if (!seen.has(p)) { seen.add(p); rankedFiles.push(p); }
+ }
+ }
+
+ const bestRank = (gtFile: string): number | null => {
+ for (let i = 0; i < rankedFiles.length; i++) {
+ if (pathMatchesGt(rankedFiles[i], gtFile)) return i + 1;
+ }
+ return null;
+ };
+
+ const coreRanks = core.map(f => ({ file: f, rank: bestRank(f) }));
+ const within = (k: number) => coreRanks.filter(c => c.rank !== null && c.rank <= k).length / core.length;
+ const recallAt5 = within(5), recallAt10 = within(10), recallAt20 = within(20);
+ const mrr = coreRanks.reduce((s, c) => s + (c.rank ? 1 / c.rank : 0), 0) / core.length;
+
+ const top5 = rankedFiles.slice(0, 5);
+ const top5Hits = top5.filter(p => gtAll.some(g => pathMatchesGt(p, g))).length;
+ const precisionAt5 = top5.length ? top5Hits / 5 : 0;
+ const f1At5 = (precisionAt5 + recallAt5) > 0
+ ? 2 * precisionAt5 * recallAt5 / (precisionAt5 + recallAt5) : 0;
+
+ const missedTop5 = coreRanks.filter(c => c.rank === null || c.rank > 5);
+ let diagnosis: RetrievalMetrics['diagnosis'] = 'ok';
+ if (missedTop5.length > 0) {
+ const rankedLow = missedTop5.some(c => c.rank !== null);
+ const recallMiss = missedTop5.some(c => c.rank === null);
+ diagnosis = rankedLow && recallMiss ? 'mixed' : rankedLow ? 'ranked-low' : 'recall-miss';
+ }
+
+ return { primaryQuery, rankedDepth: rankedFiles.length, coreRanks,
+ recallAt5, recallAt10, recallAt20, mrr, precisionAt5, f1At5, diagnosis };
+}
+
+function extractText(result: any): string {
+ return result?.content?.[0]?.text ?? '';
+}
+
+function fileMatchesInText(text: string, gtFile: string): boolean {
+ const fullPath = gtFile;
+ if (text.includes(fullPath)) return true;
+
+ const basename = path.basename(gtFile);
+ const dir = path.basename(path.dirname(gtFile));
+ if (text.includes(`${dir}/${basename}`)) return true;
+
+ const noExt = basename.replace(/\.(tsx?|js)$/, '');
+ const dirSlash = `${dir}/${noExt}`;
+ if (text.includes(dirSlash)) return true;
+
+ return false;
+}
+
+function symbolMatchesInText(text: string, symbol: string): boolean {
+ const escaped = symbol.replace(/[.*+?^${}()|[\]\\]/g, '\\$&');
+ const re = new RegExp(`\\b${escaped}\\b`);
+ return re.test(text);
+}
+
+async function runTestCase(tc: TestCase): Promise {
+ const allSearchText: string[] = [];
+ const searched = new Set();
+
+ const doSearch = async (query: string) => {
+ if (!query || searched.has(query)) return;
+ searched.add(query);
+ const result = await handleToolCall('search', { query });
+ allSearchText.push(extractText(result));
+ };
+
+ for (const sym of (tc.keySymbols ?? [])) {
+ await doSearch(sym);
+ }
+
+ for (const step of (tc.groundTruthPath ?? [])) {
+ if (step.symbol) await doSearch(step.symbol);
+ }
+
+ for (const f of tc.groundTruthFiles) {
+ const basename = path.basename(f).replace(/\.(tsx?|js)$/, '');
+ if (basename !== 'index') {
+ await doSearch(basename);
+ } else {
+ const parentDir = path.basename(path.dirname(f));
+ if (parentDir) await doSearch(`${parentDir}/index`);
+ }
+ }
+
+ const combinedSearch = allSearchText.join('\n');
+
+ const searchFileFound: string[] = [];
+ const searchFileMissed: string[] = [];
+ for (const gtFile of tc.groundTruthFiles) {
+ if (fileMatchesInText(combinedSearch, gtFile)) {
+ searchFileFound.push(gtFile);
+ } else {
+ searchFileMissed.push(gtFile);
+ }
+ }
+
+ const searchSymFound: string[] = [];
+ const searchSymMissed: string[] = [];
+ for (const sym of (tc.keySymbols ?? [])) {
+ if (symbolMatchesInText(combinedSearch, sym)) {
+ searchSymFound.push(sym);
+ } else {
+ searchSymMissed.push(sym);
+ }
+ }
+
+ let graphResult: TestResult['graphReachability'] = null;
+ let orderMetric: OrderMetric = { applicable: false, expectedChain: [], observedChain: [], lcs: 0, score: 1 };
+ if (tc.groundTruthPath && tc.groundTruthPath.length > 1) {
+ const allGraphText: string[] = [];
+ const downText: string[] = []; // forward traversals only — used for chain-order scoring
+ const graphed = new Set();
+
+ const doGraph = async (sym: string, dir: 'up' | 'down', depth = 5) => {
+ const key = `${sym}:${dir}`;
+ if (graphed.has(key)) return;
+ graphed.add(key);
+ const res = await handleToolCall('graph', { query: sym, direction: dir, depth });
+ const txt = extractText(res);
+ allGraphText.push(txt);
+ if (dir === 'down') downText.push(txt);
+ };
+
+ const entrySymbol = tc.groundTruthPath[0].symbol;
+ if (entrySymbol) await doGraph(entrySymbol, 'down');
+
+ const lastSymbol = tc.groundTruthPath[tc.groundTruthPath.length - 1].symbol;
+ if (lastSymbol && lastSymbol !== entrySymbol) await doGraph(lastSymbol, 'up');
+
+ const midIdx = Math.floor(tc.groundTruthPath.length / 2);
+ const midSymbol = tc.groundTruthPath[midIdx].symbol;
+ if (midSymbol && midSymbol !== entrySymbol && midSymbol !== lastSymbol) {
+ await doGraph(midSymbol, 'down', 4);
+ }
+
+ for (const step of tc.groundTruthPath) {
+ if (step.symbol && !graphed.has(`${step.symbol}:down`) && !graphed.has(`${step.symbol}:up`)) {
+ await doGraph(step.symbol, 'down', 3);
+ }
+ }
+
+ const combinedGraph = allGraphText.join('\n');
+ const graphFound: string[] = [];
+ const graphMissed: string[] = [];
+ for (const step of tc.groundTruthPath) {
+ if (!step.symbol) continue;
+ if (symbolMatchesInText(combinedGraph, step.symbol)) {
+ graphFound.push(step.symbol);
+ } else {
+ graphMissed.push(step.symbol);
+ }
+ }
+ const total = graphFound.length + graphMissed.length;
+ graphResult = {
+ found: graphFound,
+ missed: graphMissed,
+ rate: total > 0 ? graphFound.length / total : 1,
+ };
+
+ // Chain order (LCS) — only for questions flagged `ordered`. Partial credit, report-only.
+ if (tc.ordered) {
+ const expectedChain = tc.groundTruthPath.map(s => s.symbol).filter(Boolean);
+ const orderSrc = downText.join('\n') || combinedGraph;
+ const observedChain = expectedChain
+ .map(sym => ({ sym, idx: firstSymbolIndex(orderSrc, sym) }))
+ .filter(x => x.idx >= 0)
+ .sort((a, b) => a.idx - b.idx)
+ .map(x => x.sym);
+ const lcs = lcsLength(expectedChain, observedChain);
+ orderMetric = {
+ applicable: expectedChain.length > 1,
+ expectedChain,
+ observedChain,
+ lcs,
+ score: expectedChain.length ? lcs / expectedChain.length : 1,
+ };
+ }
+ }
+
+ const fileRate = tc.groundTruthFiles.length > 0
+ ? searchFileFound.length / tc.groundTruthFiles.length : 1;
+ const symTotal = (tc.keySymbols ?? []).length;
+ const symRate = symTotal > 0 ? searchSymFound.length / symTotal : 1;
+ const graphRate = graphResult?.rate ?? 1;
+
+ const pass = fileRate >= 0.95 && symRate >= 0.8 && graphRate >= 0.5;
+
+ const retrieval = computeRetrievalMetrics(tc);
+
+ return {
+ id: tc.id,
+ question: tc.question,
+ subsystem: tc.subsystem,
+ searchFileRecall: {
+ found: searchFileFound,
+ missed: searchFileMissed,
+ rate: fileRate,
+ },
+ searchSymbolRecall: {
+ found: searchSymFound,
+ missed: searchSymMissed,
+ rate: symRate,
+ },
+ graphReachability: graphResult,
+ order: orderMetric,
+ retrieval,
+ pass,
+ };
+}
+
+function formatReport(results: TestResult[]): string {
+ const lines: string[] = [];
+ const passed = results.filter(r => r.pass).length;
+ const total = results.length;
+
+ lines.push(`# Layer 1 — Tool Eval Report`);
+ lines.push(`\n${new Date().toLocaleString('en-US')}\n`);
+ lines.push(`## Summary: ${passed}/${total} passed\n`);
+
+ const avgFileRecall = results.reduce((s, r) => s + r.searchFileRecall.rate, 0) / total;
+ const avgSymRecall = results.reduce((s, r) => s + r.searchSymbolRecall.rate, 0) / total;
+ const graphResults = results.filter(r => r.graphReachability);
+ const avgGraphReach = graphResults.length > 0
+ ? graphResults.reduce((s, r) => s + r.graphReachability!.rate, 0) / graphResults.length : 0;
+
+ const avgPrec5 = results.reduce((s, r) => s + r.retrieval.precisionAt5, 0) / total;
+ const avgRec5 = results.reduce((s, r) => s + r.retrieval.recallAt5, 0) / total;
+ const avgRec10 = results.reduce((s, r) => s + r.retrieval.recallAt10, 0) / total;
+ const avgRec20 = results.reduce((s, r) => s + r.retrieval.recallAt20, 0) / total;
+ const avgMrr = results.reduce((s, r) => s + r.retrieval.mrr, 0) / total;
+ const avgF1 = results.reduce((s, r) => s + r.retrieval.f1At5, 0) / total;
+
+ const orderedAgg = results.filter(r => r.order.applicable);
+ const avgOrder = orderedAgg.length
+ ? orderedAgg.reduce((s, r) => s + r.order.score, 0) / orderedAgg.length : null;
+
+ lines.push(`| Metric | Average |`);
+ lines.push(`|--------|---------|`);
+ lines.push(`| File recall (search, substring) | ${(avgFileRecall * 100).toFixed(1)}% |`);
+ lines.push(`| Symbol recall (search, substring) | ${(avgSymRecall * 100).toFixed(1)}% |`);
+ lines.push(`| Graph reachability | ${(avgGraphReach * 100).toFixed(1)}% |`);
+ lines.push(`| **Precision@5** (primary query) | ${(avgPrec5 * 100).toFixed(1)}% |`);
+ lines.push(`| **Recall@5 / @10 / @20** | ${(avgRec5 * 100).toFixed(1)}% / ${(avgRec10 * 100).toFixed(1)}% / ${(avgRec20 * 100).toFixed(1)}% |`);
+ lines.push(`| **MRR** (core files) | ${avgMrr.toFixed(3)} |`);
+ lines.push(`| **F1@5** | ${(avgF1 * 100).toFixed(1)}% |`);
+ lines.push(`| **Chain order LCS** (ordered Qs: ${orderedAgg.length}, report-only) | ${avgOrder === null ? 'n/a' : (avgOrder * 100).toFixed(1) + '%'} |`);
+ lines.push('');
+
+ lines.push(`## Per-Testcase Results\n`);
+ lines.push(`| # | ID | Subsystem | Files | Symbols | Graph | Pass |`);
+ lines.push(`|---|---|---|---|---|---|---|`);
+
+ for (let i = 0; i < results.length; i++) {
+ const r = results[i];
+ const fc = `${r.searchFileRecall.found.length}/${r.searchFileRecall.found.length + r.searchFileRecall.missed.length}`;
+ const sc = `${r.searchSymbolRecall.found.length}/${r.searchSymbolRecall.found.length + r.searchSymbolRecall.missed.length}`;
+ const gc = r.graphReachability
+ ? `${r.graphReachability.found.length}/${r.graphReachability.found.length + r.graphReachability.missed.length}`
+ : '-';
+ const status = r.pass ? 'PASS' : '**FAIL**';
+ lines.push(`| ${i + 1} | ${r.id} | ${r.subsystem} | ${fc} | ${sc} | ${gc} | ${status} |`);
+ }
+
+ // Ranking quality per testcase + search-truncation diagnosis
+ lines.push(`## Retrieval Ranking (primary query → search top-50)\n`);
+ lines.push(`| # | ID | Query | P@5 | R@5 | R@10 | R@20 | MRR | Diagnosis |`);
+ lines.push(`|---|---|---|----:|----:|----:|----:|----:|---|`);
+ for (let i = 0; i < results.length; i++) {
+ const m = results[i].retrieval;
+ lines.push(`| ${i + 1} | ${results[i].id} | \`${m.primaryQuery}\` | ${(m.precisionAt5 * 100).toFixed(0)}% | ${(m.recallAt5 * 100).toFixed(0)}% | ${(m.recallAt10 * 100).toFixed(0)}% | ${(m.recallAt20 * 100).toFixed(0)}% | ${m.mrr.toFixed(2)} | ${m.diagnosis} |`);
+ }
+ lines.push('');
+ const diagCount = new Map();
+ for (const r of results) diagCount.set(r.retrieval.diagnosis, (diagCount.get(r.retrieval.diagnosis) ?? 0) + 1);
+ lines.push(`### Truncation diagnosis summary`);
+ lines.push(`| Diagnosis | Count | Action |`);
+ lines.push(`|-----------|------:|--------|`);
+ const actions: Record = {
+ 'ok': 'core files in top-5 — no change',
+ 'ranked-low': 'in top-50 but >5 → improve ranking / re-rank (not just bigger top-k)',
+ 'recall-miss': 'absent from top-50 → fix matching (threshold / split / hints)',
+ 'mixed': 'both ranking + matching issues',
+ 'n/a': 'no core files / no query',
+ };
+ for (const [d, c] of diagCount) lines.push(`| ${d} | ${c} | ${actions[d] ?? ''} |`);
+ lines.push('');
+
+ // Chain order (LCS) — ordered questions only. Report-only: NOT part of the pass gate.
+ if (orderedAgg.length > 0) {
+ lines.push(`## Chain Order (LCS — ordered questions only, report-only, not a pass gate)\n`);
+ lines.push(`| # | ID | Chain | LCS | Order | Observed order |`);
+ lines.push(`|---|---|----:|----:|----:|---|`);
+ for (let i = 0; i < results.length; i++) {
+ const r = results[i];
+ if (!r.order.applicable) continue;
+ const o = r.order;
+ const obs = o.observedChain.join(' → ') || '(none surfaced)';
+ lines.push(`| ${i + 1} | ${r.id} | ${o.expectedChain.length} | ${o.lcs} | ${(o.score * 100).toFixed(0)}% | ${obs} |`);
+ }
+ lines.push('');
+ }
+
+ const failures = results.filter(r => !r.pass);
+ if (failures.length > 0) {
+ lines.push(`\n## Failures\n`);
+ for (const r of failures) {
+ lines.push(`### ${r.id} — ${r.subsystem}\n`);
+ lines.push(`**Q:** ${r.question}\n`);
+
+ if (r.searchFileRecall.missed.length > 0) {
+ lines.push(`**Missed files (search):**`);
+ for (const f of r.searchFileRecall.missed) lines.push(`- \`${f}\``);
+ lines.push('');
+ }
+ if (r.searchSymbolRecall.missed.length > 0) {
+ lines.push(`**Missed symbols (search):**`);
+ for (const s of r.searchSymbolRecall.missed) lines.push(`- \`${s}\``);
+ lines.push('');
+ }
+ if (r.graphReachability && r.graphReachability.missed.length > 0) {
+ lines.push(`**Unreachable via graph(down):**`);
+ for (const s of r.graphReachability.missed) lines.push(`- \`${s}\``);
+ lines.push('');
+ }
+ }
+ }
+
+ return lines.join('\n');
+}
+
+async function main() {
+ console.error('Loading index...');
+ await ensureIndex();
+ console.error(`Index ready: ${GLOBAL_INDEX.symbols.size} symbols, ${GLOBAL_INDEX.allFiles.size} files.\n`);
+
+ const { flat: testcases } = loadTestcases(path.join(__dirname, 'utils', 'testcases.json'));
+
+ const filter = process.argv.find(a => a.startsWith('--filter='));
+ const filterVal = filter?.split('=')[1]?.toLowerCase();
+ const selected = filterVal
+ ? testcases.filter(t => t.id.toLowerCase().includes(filterVal) || t.subsystem.toLowerCase().includes(filterVal))
+ : testcases;
+
+ console.error(`Running ${selected.length} test cases...\n`);
+
+ const results: TestResult[] = [];
+ for (const tc of selected) {
+ process.stderr.write(` ${tc.id}... `);
+ const result = await runTestCase(tc);
+ console.error(result.pass ? 'PASS' : 'FAIL');
+ results.push(result);
+ }
+
+ const report = formatReport(results);
+
+ const logsDir = path.join(__dirname, '..', '..', 'logs');
+ fs.mkdirSync(logsDir, { recursive: true });
+ const reportPath = path.join(logsDir, 'eval-2-mcp-tools.md');
+ fs.writeFileSync(reportPath, report, 'utf-8');
+
+ console.error(`\nReport: ${reportPath}`);
+
+ const passed = results.filter(r => r.pass).length;
+ console.log(`\n${passed}/${results.length} passed`);
+
+ if (passed < results.length) process.exitCode = 1;
+}
+
+main().catch(e => {
+ console.error('Fatal:', e);
+ process.exit(2);
+});
diff --git a/src/eval/eval-3-mcp-vs-claude.ts b/src/eval/eval-3-mcp-vs-claude.ts
new file mode 100644
index 0000000..6c1540c
--- /dev/null
+++ b/src/eval/eval-3-mcp-vs-claude.ts
@@ -0,0 +1,54 @@
+#!/usr/bin/env npx tsx
+/**
+ * eval-3 — How good is the agent? Gemini + MCP (self-loop) vs Claude reference answers.
+ * Deterministic HARD part (no key): % of files Claude cites that Gemini also mentions, + which it missed.
+ * SEMANTIC part (verdict PASS/PARTIAL/FAIL): filled by Claude — with ANTHROPIC_API_KEY an API judge
+ * could do it; without a key, Claude reads each pair and writes the verdict column into this report.
+ * Run: npm run eval:3
+ */
+import * as fs from 'fs';
+import * as path from 'path';
+import { fileURLToPath } from 'url';
+import { loadTestcases } from './utils/load-testcases.js';
+import { fileMatches, readSection, extractCitedFiles } from './utils/eval-util.js';
+
+const __dirname = path.dirname(fileURLToPath(import.meta.url));
+const PROJECT_ROOT = path.resolve(__dirname, '..', '..');
+const LOGS = path.join(PROJECT_ROOT, 'logs');
+const D_MCP = path.join(LOGS, 'answers-gemini-mcp-selfloop');
+const D_CLAUDE = path.join(LOGS, 'answers-claude');
+
+function main() {
+ const { flat: testcases } = loadTestcases(path.join(__dirname, 'utils', 'testcases.json'));
+ const rows = testcases.map(tc => {
+ const a2 = readSection(path.join(D_MCP, `${tc.id}.md`), '## Gemini Answer', ['## Tool Calls']);
+ const ac = readSection(path.join(D_CLAUDE, `${tc.id}.md`), '## Answer', ['\n## Key', '\n## Metrics']);
+ const claudeFiles = extractCitedFiles(ac);
+ const missed = claudeFiles.filter(f => !fileMatches(a2, f));
+ return { id: tc.id, type: tc.questionType, claudeFiles: claudeFiles.length, hit: claudeFiles.length - missed.length, missed };
+ });
+ const n = rows.length;
+ const withC = rows.filter(r => r.claudeFiles > 0);
+ const avgVsClaude = withC.length ? withC.reduce((s, r) => s + r.hit / r.claudeFiles, 0) / withC.length : 0;
+
+ const L: string[] = [];
+ L.push(`# eval-3 — How good is the agent? (Gemini + MCP vs Claude reference)\n`);
+ L.push(`${new Date().toLocaleString('en-US')} | ${n} testcases\n`);
+ L.push(`**Hard** = % of files Claude cites that Gemini also mentions. **Semantic** (verdict) = Claude's per-pair judgment.\n`);
+ L.push(`**Hard: Gemini covers ${(avgVsClaude * 100).toFixed(0)}% of Claude's cited files (avg).**\n`);
+ L.push(`> Semantic verdict column: filled by Claude (reads each Gemini vs Claude answer). With ANTHROPIC_API_KEY an API judge can fill it automatically.\n`);
+ L.push(`| # | id | type | hard (Claude files) | missed Claude files | verdict | reason (Gemini vs Claude) |`);
+ L.push(`|---|---|---|---:|---|---|---|`);
+ rows.forEach((r, i) => {
+ const hard = r.claudeFiles ? `${r.hit}/${r.claudeFiles} (${Math.round(r.hit / r.claudeFiles * 100)}%)` : '-';
+ const miss = r.missed.length ? r.missed.map(m => path.basename(m)).slice(0, 6).join(', ') + (r.missed.length > 6 ? ` +${r.missed.length - 6}` : '') : '—';
+ L.push(`| ${i + 1} | ${r.id} | ${r.type} | ${hard} | ${miss} | _TBD_ | _Claude to fill_ |`);
+ });
+ L.push('');
+
+ fs.writeFileSync(path.join(LOGS, 'eval-3-mcp-agent-vs-claude.md'), L.join('\n'), 'utf-8');
+ console.error(`Wrote logs/eval-3-mcp-agent-vs-claude.md (hard part; semantic verdict column = _TBD_ for Claude to fill)`);
+ console.log(`eval-3: Gemini covers ${(avgVsClaude * 100).toFixed(0)}% of Claude's cited files`);
+}
+
+main();
diff --git a/src/eval/eval-4-agy.ts b/src/eval/eval-4-agy.ts
new file mode 100644
index 0000000..64f22bb
--- /dev/null
+++ b/src/eval/eval-4-agy.ts
@@ -0,0 +1,110 @@
+#!/usr/bin/env npx tsx
+/**
+ * Track B — agy (real) harness.
+ *
+ * agy is interactive, so a human runs each group as one session and records:
+ * 1) each question's answer text
+ * 2) the cumulative token usage from `/context` after the last question
+ * 3) (optional) quota used, from a quota monitor
+ *
+ * This script does NOT drive agy. It reads the recorded transcripts, runs the
+ * shared Claude judge on each answer, and reports the headline metric:
+ * "can a related-question session be answered within one free-tier budget?"
+ *
+ * Usage:
+ * npx tsx src/eval/agy-session-eval.ts --init # write blank transcript templates
+ * ANTHROPIC_API_KEY=... npx tsx src/eval/agy-session-eval.ts # score recorded transcripts
+ */
+import * as fs from 'fs';
+import * as path from 'path';
+import { fileURLToPath } from 'url';
+import { loadTestcases, type TestCase } from './utils/load-testcases.js';
+
+const __dirname = path.dirname(fileURLToPath(import.meta.url));
+const PROJECT_ROOT = path.resolve(__dirname, '..', '..');
+const SESS_DIR = path.join(PROJECT_ROOT, 'logs', 'agy-sessions');
+
+// Free-tier budget line (override with FREE_TIER_BUDGET). Default = flash 1M context window.
+const FREE_TIER_BUDGET = Number(process.env.FREE_TIER_BUDGET ?? 1_000_000);
+
+interface Transcript {
+ groupId: string;
+ contextTokensFinal: number; // from agy `/context` after the last question
+ quotaUsed?: number; // optional, from a quota monitor
+ answers: { id: string; answer: string }[];
+}
+
+function transcriptPath(groupId: string) { return path.join(SESS_DIR, `${groupId}.json`); }
+
+function initTemplates() {
+ const { groups } = loadTestcases(path.join(__dirname, 'utils', 'testcases.json'));
+ fs.mkdirSync(SESS_DIR, { recursive: true });
+ for (const g of groups) {
+ const p = transcriptPath(g.id);
+ if (fs.existsSync(p)) { console.error(`skip (exists): ${p}`); continue; }
+ const tpl: Transcript = {
+ groupId: g.id,
+ contextTokensFinal: 0,
+ quotaUsed: 0,
+ answers: g.questions.map(q => ({ id: q.id, answer: '' })),
+ };
+ fs.writeFileSync(p, JSON.stringify(tpl, null, 2), 'utf-8');
+ console.error(`wrote template: ${p} (${g.questions.length} questions, in order)`);
+ }
+ console.error(`\nRun each group as one agy session, paste answers, fill contextTokensFinal from /context, then re-run without --init.`);
+}
+
+async function main() {
+ if (process.argv.includes('--init')) { initTemplates(); return; }
+
+ const { groups, flat } = loadTestcases(path.join(__dirname, 'utils', 'testcases.json'));
+ const byId = new Map(flat.map(t => [t.id, t]));
+
+ if (!fs.existsSync(SESS_DIR)) {
+ console.error(`No transcripts at ${SESS_DIR}. Run with --init first, run agy per group, then re-run.`);
+ process.exit(1);
+ }
+
+ const L: string[] = [];
+ L.push(`# Track B (agy) — Free-tier Session Report\n`);
+ L.push(`${new Date().toLocaleString('en-US')} | budget: ${FREE_TIER_BUDGET.toLocaleString()} tokens\n`);
+ L.push(`| Session | Questions | Judge PASS | Context tokens | ≤ budget? | Completed |`);
+ L.push(`|---------|----------:|-----------:|---------------:|:---------:|:---------:|`);
+
+ const details: string[] = [];
+ let judgeAvailable = !!process.env.ANTHROPIC_API_KEY;
+
+ for (const g of groups) {
+ const p = transcriptPath(g.id);
+ if (!fs.existsSync(p)) { console.error(`missing transcript: ${g.id} (skip)`); continue; }
+ const t: Transcript = JSON.parse(fs.readFileSync(p, 'utf-8'));
+ const answered = t.answers.filter(a => a.answer.trim().length > 0);
+
+ details.push(`\n## ${g.id}\n`);
+ let pass = 0;
+ for (const a of t.answers) {
+ const tc = byId.get(a.id);
+ if (!tc) { details.push(`- \`${a.id}\` — not found in testcases`); continue; }
+ const j: { verdict: string; overall: number; reasoning: string } | null = null; // no API judge; Claude fills semantic manually
+ if (j?.verdict === 'PASS') pass++;
+ const v = j ? j.verdict : (a.answer.trim() ? 'unjudged' : 'no-answer');
+ details.push(`- \`${a.id}\` — ${v}${j ? ` (overall ${j.overall.toFixed(2)})` : ''}: ${tc.question}`);
+ if (j?.reasoning) details.push(` - ${j.reasoning}`);
+ }
+
+ const withinBudget = t.contextTokensFinal > 0 && t.contextTokensFinal <= FREE_TIER_BUDGET;
+ const completed = withinBudget && answered.length === t.answers.length;
+ L.push(`| ${g.id} | ${t.answers.length} | ${pass}/${t.answers.length} | ${t.contextTokensFinal.toLocaleString()} | ${t.contextTokensFinal > 0 ? (withinBudget ? 'YES' : 'NO') : '?'} | ${completed ? 'YES' : `NO (answered ${answered.length}/${t.answers.length})`} |`);
+ }
+
+ if (!judgeAvailable) L.push(`\n> Judge not run (ANTHROPIC_API_KEY unset) — verdicts show as "unjudged".`);
+ L.push(`\n---`);
+ L.push(details.join('\n'));
+
+ fs.mkdirSync(path.join(PROJECT_ROOT, 'logs'), { recursive: true });
+ const out = path.join(PROJECT_ROOT, 'logs', 'eval-4-agy-vs-claude.md');
+ fs.writeFileSync(out, L.join('\n'), 'utf-8');
+ console.error(`Report: ${out}`);
+}
+
+main().catch(e => { console.error('Fatal:', e); process.exit(2); });
diff --git a/src/eval/gen-gemini-mcp-selfloop.ts b/src/eval/gen-gemini-mcp-selfloop.ts
new file mode 100644
index 0000000..c8bc604
--- /dev/null
+++ b/src/eval/gen-gemini-mcp-selfloop.ts
@@ -0,0 +1,168 @@
+#!/usr/bin/env npx tsx
+/**
+ * gen:mcp — run Gemini + MCP tools (self-loop) over the testcases, save answers to
+ * logs/answers-gemini-mcp-selfloop/. GENERATOR ONLY — comparison reports are produced
+ * by eval-reports.ts (eval-1 / eval-3) from the saved answers.
+ */
+import * as fs from 'fs';
+import * as path from 'path';
+import { fileURLToPath } from 'url';
+import { GoogleGenerativeAI, type FunctionDeclaration, type Part, SchemaType } from '@google/generative-ai';
+import { OUTPUT_DIR } from '../config.js';
+import { ensureIndex } from '../indexer/index.js';
+import { handleToolCall } from '../server/registry.js';
+import { GLOBAL_INDEX } from '../indexer/state.js';
+import { loadTestcases, type TestCase } from './utils/load-testcases.js';
+
+const __dirname = path.dirname(fileURLToPath(import.meta.url));
+const PROJECT_ROOT = path.resolve(__dirname, '..', '..');
+const ANSWERS_DIR = path.join(PROJECT_ROOT, 'logs', 'answers-gemini-mcp-selfloop');
+
+interface ToolCallRecord { step: number; tool: string; args: Record; responseTokensEst: number; }
+interface AnswerRecord {
+ id: string; question: string; questionType: string; subsystem: string;
+ llmAnswer: string; toolCalls: ToolCallRecord[]; tokens: number;
+}
+
+const GEMINI_FUNCTIONS: FunctionDeclaration[] = [
+ {
+ name: 'search',
+ description: 'Find symbols and files by name. Searches the symbol index and file paths simultaneously. Pass layer when the question specifies client/server/packages/ee. Start every investigation here.',
+ parameters: {
+ type: SchemaType.OBJECT,
+ properties: {
+ query: { type: SchemaType.STRING, description: 'Symbol name, filename, path fragment, or call pattern' },
+ layer: { type: SchemaType.STRING, description: 'Restrict results to this layer: client, server, packages, or ee' },
+ },
+ required: ['query'],
+ },
+ },
+ {
+ name: 'graph',
+ description: 'Traverse the full call graph. direction=up follows callers upstream, direction=down follows callees downstream. mode=impact shows blast radius layer-by-layer.',
+ parameters: {
+ type: SchemaType.OBJECT,
+ properties: {
+ query: { type: SchemaType.STRING, description: 'Symbol name or event name to start traversal from' },
+ direction: { type: SchemaType.STRING, description: 'up or down' },
+ depth: { type: SchemaType.NUMBER, description: 'Max traversal depth (default 4, max 6)' },
+ layer: { type: SchemaType.STRING, description: 'Restrict to this layer' },
+ mode: { type: SchemaType.STRING, description: 'tree or impact' },
+ file: { type: SchemaType.STRING, description: 'Pin the traversal root when the symbol has multiple definitions (collisions). Exact file path from search; omit to auto-pick the most-imported one.' },
+ },
+ required: ['query'],
+ },
+ },
+ {
+ name: 'implement',
+ description: 'Read the full source implementation of a specific symbol, plus callee skeletons. filename is REQUIRED.',
+ parameters: {
+ type: SchemaType.OBJECT,
+ properties: {
+ symbolName: { type: SchemaType.STRING, description: 'Symbol name' },
+ filename: { type: SchemaType.STRING, description: 'Exact file path from search/graph results' },
+ },
+ required: ['symbolName', 'filename'],
+ },
+ },
+];
+
+function extractToolResultText(result: any): string { return result?.content?.[0]?.text ?? ''; }
+
+async function runTestCase(model: any, tc: TestCase): Promise {
+ const toolCalls: ToolCallRecord[] = [];
+ let totalTokens = 0;
+ let step = 0;
+ const chat = model.startChat({ history: [] });
+
+ let response = await chat.sendMessage(tc.question);
+ if (response.response.usageMetadata) totalTokens += response.response.usageMetadata.totalTokenCount ?? 0;
+
+ const MAX_TURNS = 12, MAX_TOOL_CALLS = 8;
+ let turns = 0;
+ while (turns < MAX_TURNS) {
+ const candidate = response.response.candidates?.[0];
+ if (!candidate) break;
+ const fnCalls = candidate.content?.parts?.filter((p: any) => p.functionCall) ?? [];
+ if (fnCalls.length === 0) break;
+ if (step >= MAX_TOOL_CALLS) {
+ response = await chat.sendMessage('You have used all available tool calls. Please provide your final answer now based on the information you have gathered.');
+ if (response.response.usageMetadata) totalTokens += response.response.usageMetadata.totalTokenCount ?? 0;
+ break;
+ }
+ const fnResponses: Part[] = [];
+ for (const part of fnCalls) {
+ const fc = part.functionCall!;
+ step++;
+ const toolResult = await handleToolCall(fc.name, fc.args ?? {});
+ const resultText = extractToolResultText(toolResult);
+ toolCalls.push({ step, tool: fc.name, args: fc.args ?? {}, responseTokensEst: Math.ceil(resultText.length / 4) });
+ fnResponses.push({ functionResponse: { name: fc.name, response: { content: resultText } } } as any);
+ }
+ response = await chat.sendMessage(fnResponses);
+ if (response.response.usageMetadata) totalTokens += response.response.usageMetadata.totalTokenCount ?? 0;
+ turns++;
+ }
+
+ const llmAnswer = response.response.candidates?.[0]?.content?.parts
+ ?.filter((p: any) => p.text)?.map((p: any) => p.text)?.join('\n') ?? '';
+ return { id: tc.id, question: tc.question, questionType: tc.questionType, subsystem: tc.subsystem, llmAnswer, toolCalls, tokens: totalTokens };
+}
+
+function saveAnswers(records: AnswerRecord[]) {
+ fs.mkdirSync(ANSWERS_DIR, { recursive: true });
+ for (const r of records) {
+ const trace = r.toolCalls.map(t =>
+ `**Step ${t.step}:** \`${t.tool}(${JSON.stringify(t.args).substring(0, 100)})\` → ${t.responseTokensEst} tokens`).join('\n');
+ const content = `# ${r.question}\n\n## Gemini Answer\n\n${r.llmAnswer}\n\n## Tool Calls (${r.toolCalls.length} calls, ${r.tokens.toLocaleString()} tokens)\n\n${trace}\n`;
+ fs.writeFileSync(path.join(ANSWERS_DIR, `${r.id}.md`), content, 'utf-8');
+ }
+}
+
+async function main() {
+ const apiKey = process.env.GEMINI_API_KEY;
+ if (!apiKey) { console.error('GEMINI_API_KEY not set. Export it and retry.'); process.exit(1); }
+
+ console.error('Loading index...');
+ await ensureIndex();
+ console.error(`Index ready: ${GLOBAL_INDEX.symbols.size} symbols, ${GLOBAL_INDEX.allFiles.size} files.\n`);
+
+ const agentsMd = fs.readFileSync(path.join(PROJECT_ROOT, 'AGENTS.md'), 'utf-8');
+ const genAI = new GoogleGenerativeAI(apiKey);
+ const modelName = process.argv.find(a => a.startsWith('--model='))?.split('=')[1] ?? 'gemini-2.5-flash';
+ const model = genAI.getGenerativeModel({
+ model: modelName,
+ tools: [{ functionDeclarations: GEMINI_FUNCTIONS }],
+ systemInstruction: { role: 'user', parts: [{ text: agentsMd }] },
+ });
+
+ const { flat: testcases } = loadTestcases(path.join(__dirname, 'utils', 'testcases.json'));
+ const filterVal = process.argv.find(a => a.startsWith('--filter='))?.split('=')[1]?.toLowerCase();
+ const selected = filterVal
+ ? testcases.filter(t => t.id.toLowerCase().includes(filterVal) || t.subsystem.toLowerCase().includes(filterVal))
+ : testcases;
+
+ console.error(`Running ${selected.length} test cases with ${modelName}...\n`);
+ const records: AnswerRecord[] = [];
+ for (let i = 0; i < selected.length; i++) {
+ const tc = selected[i];
+ process.stderr.write(` [${i + 1}/${selected.length}] ${tc.id}... `);
+ try {
+ const rec = await runTestCase(model, tc);
+ console.error(`${rec.toolCalls.length} calls, ${rec.tokens} tokens`);
+ records.push(rec);
+ const isPro = modelName.includes('pro');
+ if (i < selected.length - 1) await new Promise(r => setTimeout(r, isPro ? 13000 : 4500));
+ } catch (e: any) {
+ console.error(`ERROR: ${e?.message?.slice(0, 100)}`);
+ records.push({ id: tc.id, question: tc.question, questionType: tc.questionType, subsystem: tc.subsystem, llmAnswer: `ERROR: ${e?.message}`, toolCalls: [], tokens: 0 });
+ await new Promise(r => setTimeout(r, 5000));
+ }
+ }
+
+ saveAnswers(records);
+ console.error(`Answers saved to logs/answers-gemini-mcp-selfloop/`);
+ console.log(`\n${records.length} answers | ${records.reduce((s, r) => s + r.tokens, 0).toLocaleString()} total tokens`);
+}
+
+main().catch(e => { console.error('Fatal:', e); process.exit(2); });
diff --git a/src/eval/baseline-eval.ts b/src/eval/gen-gemini-nomcp.ts
similarity index 71%
rename from src/eval/baseline-eval.ts
rename to src/eval/gen-gemini-nomcp.ts
index b47e4c1..cc1d946 100644
--- a/src/eval/baseline-eval.ts
+++ b/src/eval/gen-gemini-nomcp.ts
@@ -3,20 +3,11 @@ import * as fs from 'fs';
import * as path from 'path';
import { fileURLToPath } from 'url';
import { GoogleGenerativeAI } from '@google/generative-ai';
+import { loadTestcases } from './utils/load-testcases.js';
const __dirname = path.dirname(fileURLToPath(import.meta.url));
const PROJECT_ROOT = path.resolve(__dirname, '..', '..');
-interface TestCase {
- id: string;
- question: string;
- questionType: string;
- subsystem: string;
- difficulty: string;
- groundTruthFiles: string[];
- keySymbols?: string[];
-}
-
interface BaselineResult {
id: string;
question: string;
@@ -43,9 +34,7 @@ async function main() {
},
});
- const testcases: TestCase[] = JSON.parse(
- fs.readFileSync(path.join(__dirname, 'testcases.json'), 'utf-8')
- );
+ const { flat: testcases } = loadTestcases(path.join(__dirname, 'utils', 'testcases.json'));
const filter = process.argv.find(a => a.startsWith('--filter='));
const filterVal = filter?.split('=')[1]?.toLowerCase();
@@ -55,7 +44,7 @@ async function main() {
console.error(`Running ${selected.length} baseline questions with ${modelName} (NO tools)...\n`);
- const baselineDir = path.join(PROJECT_ROOT, 'logs', 'baseline');
+ const baselineDir = path.join(PROJECT_ROOT, 'logs', 'answers-gemini-nomcp');
fs.mkdirSync(baselineDir, { recursive: true });
const results: BaselineResult[] = [];
@@ -110,30 +99,10 @@ async function main() {
const totalTokens = results.reduce((s, r) => s + r.tokens.total, 0);
const avgTokens = totalTokens / results.length;
- const lines: string[] = [];
- lines.push(`# Baseline Eval Report (No Tools)\n`);
- lines.push(`${new Date().toLocaleString('en-US')} | Model: ${modelName} | Testcases: ${results.length}\n`);
- lines.push(`## Summary\n`);
- lines.push(`| Metric | Value |`);
- lines.push(`|--------|-------|`);
- lines.push(`| Avg tokens / question | ${Math.round(avgTokens).toLocaleString()} |`);
- lines.push(`| Total tokens | ${totalTokens.toLocaleString()} |`);
- lines.push(`| Tools | NONE |`);
- lines.push('');
-
- lines.push(`## Per-Question\n`);
- lines.push(`| # | ID | Type | Subsystem | Tokens | Words |`);
- lines.push(`|---|---|---|---|------:|------:|`);
- for (let i = 0; i < results.length; i++) {
- const r = results[i];
- const words = r.answer.split(/\s+/).length;
- lines.push(`| ${i + 1} | ${r.id} | ${r.questionType} | ${r.subsystem} | ${r.tokens.total.toLocaleString()} | ${words} |`);
- }
-
- const reportPath = path.join(PROJECT_ROOT, 'logs', 'baseline-eval.md');
- fs.writeFileSync(reportPath, lines.join('\n'), 'utf-8');
- console.error(`\nReport: ${reportPath}`);
- console.error(`Answers: logs/baseline/`);
+ // Generator only: writes answers to answers-gemini-nomcp/. The comparison report
+ // (eval-1-nomcp-vs-mcp-agent.md) is produced by compare.ts from these saved answers.
+ void avgTokens;
+ console.error(`Answers: logs/answers-gemini-nomcp/`);
console.log(`\n${results.length} answers | ${totalTokens.toLocaleString()} total tokens`);
}
diff --git a/src/eval/testcases.json b/src/eval/testcases.json
deleted file mode 100644
index de0dda6..0000000
--- a/src/eval/testcases.json
+++ /dev/null
@@ -1,1307 +0,0 @@
-[
- {
- "id": "tour-04-msg-client",
- "question": "How is a message sent on the client side in Rocket.Chat?",
- "questionType": "architecture",
- "subsystem": "message chat",
- "difficulty": "medium",
- "source": "RC.Guided.Tours",
- "groundTruthFiles": [
- "apps/meteor/client/views/room/body/RoomBody.tsx",
- "apps/meteor/client/views/room/composer/ComposerContainer.tsx",
- "apps/meteor/client/views/room/composer/ComposerMessage.tsx",
- "apps/meteor/client/views/room/composer/messageBox/MessageBox.tsx",
- "apps/meteor/client/lib/chats/ChatAPI.ts",
- "apps/meteor/client/lib/chats/flows/sendMessage.ts"
- ],
- "groundTruthPath": [
- {
- "file": "apps/meteor/client/views/room/body/RoomBody.tsx",
- "symbol": "RoomBody"
- },
- {
- "file": "apps/meteor/client/views/room/composer/ComposerContainer.tsx",
- "symbol": "ComposerContainer"
- },
- {
- "file": "apps/meteor/client/views/room/composer/ComposerMessage.tsx",
- "symbol": "onSend"
- },
- {
- "file": "apps/meteor/client/views/room/composer/messageBox/MessageBox.tsx",
- "symbol": "handleSendMessage"
- },
- {
- "file": "apps/meteor/client/lib/chats/ChatAPI.ts",
- "symbol": "ChatAPI"
- },
- {
- "file": "apps/meteor/client/lib/chats/flows/sendMessage.ts",
- "symbol": "sendMessage"
- }
- ],
- "keySymbols": [
- "handleSendMessage",
- "onSend",
- "ChatAPI",
- "sendMessage",
- "ComposerMessage"
- ]
- },
- {
- "id": "tour-05-msg-server",
- "question": "How is a message sent on the server side in Rocket.Chat?",
- "questionType": "call-chain",
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- "apps/meteor/server/services/ldap/service.ts",
- "apps/meteor/server/lib/ldap/Manager.ts",
- "apps/meteor/server/lib/ldap/Connection.ts",
- "apps/meteor/server/lib/ldap/UserConverter.ts",
- "apps/meteor/server/lib/ldap/Logger.ts"
- ],
- "groundTruthPath": [
- {
- "file": "apps/meteor/server/configuration/ldap.ts",
- "symbol": "configureLDAP"
- },
- {
- "file": "apps/meteor/server/services/ldap/service.ts",
- "symbol": "LDAPService"
- },
- {
- "file": "apps/meteor/server/lib/ldap/Manager.ts",
- "symbol": "LDAPManager"
- },
- {
- "file": "apps/meteor/server/lib/ldap/Connection.ts",
- "symbol": "LDAPConnection"
- }
- ],
- "keySymbols": [
- "configureLDAP",
- "LDAPManager",
- "LDAPConnection",
- "registerLoginHandler"
- ]
- },
- {
- "id": "new-13-room-creation",
- "question": "What happens when a user creates a new channel in Rocket.Chat?",
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- "subsystem": "rooms",
- "difficulty": "medium",
- "source": "claude",
- "groundTruthFiles": [
- "apps/meteor/app/lib/server/methods/createChannel.ts",
- "apps/meteor/app/lib/server/functions/createRoom.ts",
- "apps/meteor/app/lib/server/functions/createDirectRoom.ts",
- "apps/meteor/server/services/room/service.ts",
- "apps/meteor/server/lib/callbacks/beforeCreateRoomCallback.ts",
- "apps/meteor/server/lib/callbacks/beforeAddUserToRoom.ts"
- ],
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- "file": "apps/meteor/app/lib/server/methods/createChannel.ts",
- "symbol": "createChannelMethod"
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- "symbol": "createRoom"
- },
- {
- "file": "apps/meteor/server/services/room/service.ts",
- "symbol": "RoomService"
- }
- ],
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- "createRoom",
- "RoomService"
- ]
- },
- {
- "id": "new-14-ee-license",
- "question": "How does enterprise feature gating work in Rocket.Chat?",
- "questionType": "locate",
- "subsystem": "ee licensing",
- "difficulty": "hard",
- "source": "claude",
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- "ee/packages/license/src/modules.ts",
- "ee/packages/license/src/events/listeners.ts",
- "ee/packages/license/src/events/emitter.ts",
- "ee/packages/license/src/validation/runValidation.ts"
- ],
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- },
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- "symbol": "onValidateLicense"
- }
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- "LicenseImp",
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- "hasModule",
- "LicenseService"
- ]
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- "id": "new-15-impact-aftersave",
- "question": "What would be impacted if the afterSaveMessage callback system were changed?",
- "questionType": "impact",
- "subsystem": "message chat",
- "difficulty": "hard",
- "source": "claude",
- "groundTruthFiles": [
- "apps/meteor/app/lib/server/lib/afterSaveMessage.ts",
- "apps/meteor/app/lib/server/functions/sendMessage.ts",
- "apps/meteor/app/lib/server/functions/updateMessage.ts",
- "apps/meteor/app/lib/server/lib/sendNotificationsOnMessage.ts",
- "apps/meteor/app/lib/server/lib/notifyUsersOnMessage.ts",
- "apps/meteor/app/lib/server/startup/mentionUserNotInChannel.ts"
- ],
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- "symbol": "sendAllNotifications"
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- "file": "apps/meteor/app/lib/server/functions/sendMessage.ts",
- "symbol": "sendMessage"
- }
- ],
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- "afterSaveMessage",
- "sendAllNotifications",
- "notifyOnMessageChange",
- "sendMessage"
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- "question": "What is the blast radius of changing the Streamer module in Rocket.Chat?",
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- "apps/meteor/server/modules/streamer/types.ts",
- "apps/meteor/server/modules/notifications/notifications.module.ts",
- "apps/meteor/server/modules/listeners/listeners.module.ts",
- "apps/meteor/app/notifications/server/lib/Presence.ts"
- ],
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- "question": "How do slash commands work in Rocket.Chat — from registration to execution?",
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- "apps/meteor/client/lib/chats/flows/processSlashCommand.ts",
- "apps/meteor/client/lib/chats/flows/sendMessage.ts",
- "apps/meteor/app/slashcommands-invite/server/server.ts",
- "apps/meteor/app/slashcommands-kick/server/server.ts",
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- "file": "apps/meteor/app/utils/server/slashCommand.ts",
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- "file": "apps/meteor/client/lib/chats/flows/processSlashCommand.ts",
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- "file": "apps/meteor/app/slashcommands-invite/server/server.ts",
- "symbol": "slashCommands"
- }
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- "processSlashCommand"
- ]
- },
- {
- "id": "new-18-webhook",
- "question": "How does an incoming webhook get processed in Rocket.Chat?",
- "questionType": "routing",
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- "source": "claude",
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- "apps/meteor/app/integrations/server/api/api.ts",
- "apps/meteor/app/lib/server/functions/processWebhookMessage.ts",
- "apps/meteor/app/integrations/server/lib/triggerHandler.ts",
- "apps/meteor/app/integrations/server/lib/isolated-vm/isolated-vm.ts",
- "apps/meteor/app/integrations/server/lib/updateHistory.ts",
- "apps/meteor/app/integrations/lib/outgoingEvents.ts"
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- "file": "apps/meteor/app/lib/server/functions/processWebhookMessage.ts",
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- }
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- ]
- },
- {
- "id": "new-19-message-rendering",
- "question": "How is a message rendered from raw text to React components in Rocket.Chat?",
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- "difficulty": "medium",
- "source": "claude",
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- ],
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- }
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- ],
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- }
- ],
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- ]
- },
- {
- "id": "new-21-impact-settings",
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- },
- {
- "id": "new-22-2fa",
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- ]
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- {
- "id": "new-23-omnichannel",
- "question": "How does the Omnichannel queue process and close a livechat conversation?",
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- ],
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- ]
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- "id": "new-24-autotranslate",
- "question": "How does the auto-translate feature work for messages in Rocket.Chat?",
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- ],
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- "symbol": "GoogleAutoTranslate"
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- "AutoTranslate"
- ]
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- "ITeamService"
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- "id": "new-27-video-conference",
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- "apps/meteor/server/lib/videoConfTypes.ts",
- "apps/meteor/server/lib/isRoomCompatibleWithVideoConfRinging.ts",
- "packages/models/src/models/VideoConference.ts"
- ],
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- "symbol": "VideoConfService"
- }
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- "VideoConfService",
- "IVideoConfService"
- ]
- }
-]
diff --git a/src/eval/tool-eval.ts b/src/eval/tool-eval.ts
deleted file mode 100644
index 1922910..0000000
--- a/src/eval/tool-eval.ts
+++ /dev/null
@@ -1,302 +0,0 @@
-#!/usr/bin/env npx tsx
-import * as fs from 'fs';
-import * as path from 'path';
-import { fileURLToPath } from 'url';
-import { OUTPUT_DIR } from '../config.js';
-import { preWarmCache, initializeGlobalIndex, LocalDatabase } from '../indexer/index.js';
-import { handleToolCall } from '../server/registry.js';
-import { GLOBAL_INDEX } from '../indexer/state.js';
-
-const __dirname = path.dirname(fileURLToPath(import.meta.url));
-
-interface TestCase {
- id: string;
- question: string;
- questionType: string;
- subsystem: string;
- difficulty: string;
- groundTruthFiles: string[];
- groundTruthPath?: Array<{ file: string; symbol: string }>;
- keySymbols?: string[];
-}
-
-interface TestResult {
- id: string;
- question: string;
- subsystem: string;
- searchFileRecall: { found: string[]; missed: string[]; rate: number };
- searchSymbolRecall: { found: string[]; missed: string[]; rate: number };
- graphReachability: { found: string[]; missed: string[]; rate: number } | null;
- pass: boolean;
-}
-
-function extractText(result: any): string {
- return result?.content?.[0]?.text ?? '';
-}
-
-function fileMatchesInText(text: string, gtFile: string): boolean {
- const fullPath = gtFile;
- if (text.includes(fullPath)) return true;
-
- const basename = path.basename(gtFile);
- const dir = path.basename(path.dirname(gtFile));
- if (text.includes(`${dir}/${basename}`)) return true;
-
- const noExt = basename.replace(/\.(tsx?|js)$/, '');
- const dirSlash = `${dir}/${noExt}`;
- if (text.includes(dirSlash)) return true;
-
- return false;
-}
-
-function symbolMatchesInText(text: string, symbol: string): boolean {
- const escaped = symbol.replace(/[.*+?^${}()|[\]\\]/g, '\\$&');
- const re = new RegExp(`\\b${escaped}\\b`);
- return re.test(text);
-}
-
-async function runTestCase(tc: TestCase): Promise {
- const allSearchText: string[] = [];
- const searched = new Set();
-
- const doSearch = async (query: string) => {
- if (!query || searched.has(query)) return;
- searched.add(query);
- const result = await handleToolCall('search', { query });
- allSearchText.push(extractText(result));
- };
-
- for (const sym of (tc.keySymbols ?? [])) {
- await doSearch(sym);
- }
-
- for (const step of (tc.groundTruthPath ?? [])) {
- if (step.symbol) await doSearch(step.symbol);
- }
-
- for (const f of tc.groundTruthFiles) {
- const basename = path.basename(f).replace(/\.(tsx?|js)$/, '');
- if (basename !== 'index') {
- await doSearch(basename);
- } else {
- const parentDir = path.basename(path.dirname(f));
- if (parentDir) await doSearch(`${parentDir}/index`);
- }
- }
-
- const combinedSearch = allSearchText.join('\n');
-
- const searchFileFound: string[] = [];
- const searchFileMissed: string[] = [];
- for (const gtFile of tc.groundTruthFiles) {
- if (fileMatchesInText(combinedSearch, gtFile)) {
- searchFileFound.push(gtFile);
- } else {
- searchFileMissed.push(gtFile);
- }
- }
-
- const searchSymFound: string[] = [];
- const searchSymMissed: string[] = [];
- for (const sym of (tc.keySymbols ?? [])) {
- if (symbolMatchesInText(combinedSearch, sym)) {
- searchSymFound.push(sym);
- } else {
- searchSymMissed.push(sym);
- }
- }
-
- let graphResult: TestResult['graphReachability'] = null;
- if (tc.groundTruthPath && tc.groundTruthPath.length > 1) {
- const allGraphText: string[] = [];
- const graphed = new Set();
-
- const doGraph = async (sym: string, dir: 'up' | 'down', depth = 5) => {
- const key = `${sym}:${dir}`;
- if (graphed.has(key)) return;
- graphed.add(key);
- const res = await handleToolCall('graph', { query: sym, direction: dir, depth });
- allGraphText.push(extractText(res));
- };
-
- const entrySymbol = tc.groundTruthPath[0].symbol;
- if (entrySymbol) await doGraph(entrySymbol, 'down');
-
- const lastSymbol = tc.groundTruthPath[tc.groundTruthPath.length - 1].symbol;
- if (lastSymbol && lastSymbol !== entrySymbol) await doGraph(lastSymbol, 'up');
-
- const midIdx = Math.floor(tc.groundTruthPath.length / 2);
- const midSymbol = tc.groundTruthPath[midIdx].symbol;
- if (midSymbol && midSymbol !== entrySymbol && midSymbol !== lastSymbol) {
- await doGraph(midSymbol, 'down', 4);
- }
-
- for (const step of tc.groundTruthPath) {
- if (step.symbol && !graphed.has(`${step.symbol}:down`) && !graphed.has(`${step.symbol}:up`)) {
- await doGraph(step.symbol, 'down', 3);
- }
- }
-
- const combinedGraph = allGraphText.join('\n');
- const graphFound: string[] = [];
- const graphMissed: string[] = [];
- for (const step of tc.groundTruthPath) {
- if (!step.symbol) continue;
- if (symbolMatchesInText(combinedGraph, step.symbol)) {
- graphFound.push(step.symbol);
- } else {
- graphMissed.push(step.symbol);
- }
- }
- const total = graphFound.length + graphMissed.length;
- graphResult = {
- found: graphFound,
- missed: graphMissed,
- rate: total > 0 ? graphFound.length / total : 1,
- };
- }
-
- const fileRate = tc.groundTruthFiles.length > 0
- ? searchFileFound.length / tc.groundTruthFiles.length : 1;
- const symTotal = (tc.keySymbols ?? []).length;
- const symRate = symTotal > 0 ? searchSymFound.length / symTotal : 1;
- const graphRate = graphResult?.rate ?? 1;
-
- const pass = fileRate >= 0.95 && symRate >= 0.8 && graphRate >= 0.5;
-
- return {
- id: tc.id,
- question: tc.question,
- subsystem: tc.subsystem,
- searchFileRecall: {
- found: searchFileFound,
- missed: searchFileMissed,
- rate: fileRate,
- },
- searchSymbolRecall: {
- found: searchSymFound,
- missed: searchSymMissed,
- rate: symRate,
- },
- graphReachability: graphResult,
- pass,
- };
-}
-
-function formatReport(results: TestResult[]): string {
- const lines: string[] = [];
- const passed = results.filter(r => r.pass).length;
- const total = results.length;
-
- lines.push(`# Layer 1 — Tool Eval Report`);
- lines.push(`\n${new Date().toLocaleString('en-US')}\n`);
- lines.push(`## Summary: ${passed}/${total} passed\n`);
-
- const avgFileRecall = results.reduce((s, r) => s + r.searchFileRecall.rate, 0) / total;
- const avgSymRecall = results.reduce((s, r) => s + r.searchSymbolRecall.rate, 0) / total;
- const graphResults = results.filter(r => r.graphReachability);
- const avgGraphReach = graphResults.length > 0
- ? graphResults.reduce((s, r) => s + r.graphReachability!.rate, 0) / graphResults.length : 0;
-
- lines.push(`| Metric | Average |`);
- lines.push(`|--------|---------|`);
- lines.push(`| File recall (search) | ${(avgFileRecall * 100).toFixed(1)}% |`);
- lines.push(`| Symbol recall (search) | ${(avgSymRecall * 100).toFixed(1)}% |`);
- lines.push(`| Graph reachability | ${(avgGraphReach * 100).toFixed(1)}% |`);
- lines.push('');
-
- lines.push(`## Per-Testcase Results\n`);
- lines.push(`| # | ID | Subsystem | Files | Symbols | Graph | Pass |`);
- lines.push(`|---|---|---|---|---|---|---|`);
-
- for (let i = 0; i < results.length; i++) {
- const r = results[i];
- const fc = `${r.searchFileRecall.found.length}/${r.searchFileRecall.found.length + r.searchFileRecall.missed.length}`;
- const sc = `${r.searchSymbolRecall.found.length}/${r.searchSymbolRecall.found.length + r.searchSymbolRecall.missed.length}`;
- const gc = r.graphReachability
- ? `${r.graphReachability.found.length}/${r.graphReachability.found.length + r.graphReachability.missed.length}`
- : '-';
- const status = r.pass ? 'PASS' : '**FAIL**';
- lines.push(`| ${i + 1} | ${r.id} | ${r.subsystem} | ${fc} | ${sc} | ${gc} | ${status} |`);
- }
-
- const failures = results.filter(r => !r.pass);
- if (failures.length > 0) {
- lines.push(`\n## Failures\n`);
- for (const r of failures) {
- lines.push(`### ${r.id} — ${r.subsystem}\n`);
- lines.push(`**Q:** ${r.question}\n`);
-
- if (r.searchFileRecall.missed.length > 0) {
- lines.push(`**Missed files (search):**`);
- for (const f of r.searchFileRecall.missed) lines.push(`- \`${f}\``);
- lines.push('');
- }
- if (r.searchSymbolRecall.missed.length > 0) {
- lines.push(`**Missed symbols (search):**`);
- for (const s of r.searchSymbolRecall.missed) lines.push(`- \`${s}\``);
- lines.push('');
- }
- if (r.graphReachability && r.graphReachability.missed.length > 0) {
- lines.push(`**Unreachable via graph(down):**`);
- for (const s of r.graphReachability.missed) lines.push(`- \`${s}\``);
- lines.push('');
- }
- }
- }
-
- return lines.join('\n');
-}
-
-async function main() {
- console.error('Loading index...');
- if (!fs.existsSync(OUTPUT_DIR)) fs.mkdirSync(OUTPUT_DIR, { recursive: true });
-
- const { updatedCount } = preWarmCache();
- const db = new LocalDatabase(OUTPUT_DIR);
- if (updatedCount > 0 || !db.loadIndex(GLOBAL_INDEX)) {
- initializeGlobalIndex();
- db.saveIndex(GLOBAL_INDEX);
- }
-
- console.error(`Index ready: ${GLOBAL_INDEX.symbols.size} symbols, ${GLOBAL_INDEX.allFiles.size} files.\n`);
-
- const testcases: TestCase[] = JSON.parse(
- fs.readFileSync(path.join(__dirname, 'testcases.json'), 'utf-8')
- );
-
- const filter = process.argv.find(a => a.startsWith('--filter='));
- const filterVal = filter?.split('=')[1]?.toLowerCase();
- const selected = filterVal
- ? testcases.filter(t => t.id.toLowerCase().includes(filterVal) || t.subsystem.toLowerCase().includes(filterVal))
- : testcases;
-
- console.error(`Running ${selected.length} test cases...\n`);
-
- const results: TestResult[] = [];
- for (const tc of selected) {
- process.stderr.write(` ${tc.id}... `);
- const result = await runTestCase(tc);
- console.error(result.pass ? 'PASS' : 'FAIL');
- results.push(result);
- }
-
- const report = formatReport(results);
-
- const logsDir = path.join(__dirname, '..', '..', 'logs');
- fs.mkdirSync(logsDir, { recursive: true });
- const reportPath = path.join(logsDir, 'tool-eval.md');
- fs.writeFileSync(reportPath, report, 'utf-8');
-
- console.error(`\nReport: ${reportPath}`);
-
- const passed = results.filter(r => r.pass).length;
- console.log(`\n${passed}/${results.length} passed`);
-
- if (passed < results.length) process.exitCode = 1;
-}
-
-main().catch(e => {
- console.error('Fatal:', e);
- process.exit(2);
-});
diff --git a/src/eval/utils/eval-util.ts b/src/eval/utils/eval-util.ts
new file mode 100644
index 0000000..c494f7d
--- /dev/null
+++ b/src/eval/utils/eval-util.ts
@@ -0,0 +1,45 @@
+// Shared deterministic helpers for the eval report scripts (no LLM, no key).
+import * as fs from 'fs';
+import * as path from 'path';
+
+export const LOGS = (projectRoot: string) => path.join(projectRoot, 'logs');
+
+// Does the answer text mention this ground-truth file (full path, dir/base, or dir/base-no-ext)?
+export function fileMatches(text: string, gtFile: string): boolean {
+ if (text.includes(gtFile)) return true;
+ const base = path.basename(gtFile);
+ const dir = path.basename(path.dirname(gtFile));
+ if (text.includes(`${dir}/${base}`)) return true;
+ return text.includes(`${dir}/${base.replace(/\.(tsx?|js)$/, '')}`);
+}
+
+export function symMatch(text: string, sym: string): boolean {
+ return new RegExp(`\\b${sym.replace(/[.*+?^${}()|[\]\\]/g, '\\$&')}\\b`).test(text);
+}
+
+// Lenient coverage: fraction of {core files ∪ key symbols} the answer mentions.
+export function coverage(text: string, core: string[], syms: string[]): number {
+ const total = core.length + syms.length;
+ if (!total) return 1;
+ return (core.filter(f => fileMatches(text, f)).length + syms.filter(s => symMatch(text, s)).length) / total;
+}
+
+// Read a markdown section between a start marker and the first of any end markers.
+export function readSection(file: string, start: string, ends: string[]): string {
+ try {
+ let s = fs.readFileSync(file, 'utf-8');
+ if (start && s.includes(start)) s = s.split(start)[1];
+ for (const e of ends) if (s.includes(e)) s = s.split(e)[0];
+ return s.trim();
+ } catch { return ''; }
+}
+
+export function tokensOf(file: string, re: RegExp): number {
+ try { return Number((fs.readFileSync(file, 'utf-8').match(re)?.[1] ?? '0').replace(/,/g, '')); } catch { return 0; }
+}
+
+// Pull path-like file references out of answer prose.
+export function extractCitedFiles(answer: string): string[] {
+ const m = answer.match(/(?:apps\/meteor|packages|ee)\/[\w./-]+\.(?:tsx?|js)/g) ?? [];
+ return Array.from(new Set(m));
+}
diff --git a/src/eval/utils/load-testcases.ts b/src/eval/utils/load-testcases.ts
new file mode 100644
index 0000000..6f54477
--- /dev/null
+++ b/src/eval/utils/load-testcases.ts
@@ -0,0 +1,57 @@
+import * as fs from 'fs';
+
+export interface PathStep { file: string; symbol: string }
+
+export interface TestCase {
+ id: string;
+ question: string;
+ questionType: string;
+ subsystem: string;
+ difficulty: string;
+ source?: string;
+ groundTruthFiles: string[];
+ groundTruthPath?: PathStep[];
+ keySymbols?: string[];
+ // grouped-v1 enrichments
+ core?: string[]; // must-find files (the call-chain spine)
+ supporting?: string[]; // nice-to-find files (bonus, not penalised if missing)
+ ordered?: boolean; // call-chain order is meaningful for this question
+ // injected at load time
+ groupId?: string;
+}
+
+export interface TestGroup {
+ id: string;
+ subsystems?: string[];
+ subsystem?: string;
+ questions: TestCase[];
+}
+
+interface GroupedFile { schema?: string; note?: string; groups: TestGroup[] }
+
+/**
+ * Loads testcases.json. Supports both the legacy flat array and the new
+ * grouped-v1 format ({ groups: [{ id, questions: [...] }] }).
+ * Returns groups (each group = an ordered agy session) plus a flattened
+ * list (for the per-question automated harnesses).
+ */
+export function loadTestcases(filePath: string): { groups: TestGroup[]; flat: TestCase[] } {
+ const raw = JSON.parse(fs.readFileSync(filePath, 'utf-8'));
+
+ if (Array.isArray(raw)) {
+ // legacy flat format → one synthetic group
+ const flat = raw as TestCase[];
+ return { groups: [{ id: 'all', questions: flat }], flat };
+ }
+
+ const grouped = raw as GroupedFile;
+ const groups = grouped.groups ?? [];
+ const flat: TestCase[] = [];
+ for (const g of groups) {
+ for (const q of g.questions) {
+ q.groupId = g.id;
+ flat.push(q);
+ }
+ }
+ return { groups, flat };
+}
diff --git a/src/eval/utils/testcases.json b/src/eval/utils/testcases.json
new file mode 100644
index 0000000..cc7f0f6
--- /dev/null
+++ b/src/eval/utils/testcases.json
@@ -0,0 +1,1751 @@
+{
+ "schema": "grouped-v1",
+ "note": "layer1/layer2 flatten groups and run questions individually; agy runs each group in order as one free-tier session",
+ "groups": [
+ {
+ "id": "messaging",
+ "subsystems": [
+ "autotranslate",
+ "message chat",
+ "message rendering",
+ "push notifications",
+ "streamer"
+ ],
+ "questions": [
+ {
+ "id": "tour-04-msg-client",
+ "question": "How is a message sent on the client side in Rocket.Chat?",
+ "questionType": "architecture",
+ "subsystem": "message chat",
+ "difficulty": "medium",
+ "source": "RC.Guided.Tours",
+ "groundTruthFiles": [
+ "apps/meteor/client/views/room/body/RoomBody.tsx",
+ "apps/meteor/client/views/room/composer/ComposerContainer.tsx",
+ "apps/meteor/client/views/room/composer/ComposerMessage.tsx",
+ "apps/meteor/client/views/room/composer/messageBox/MessageBox.tsx",
+ "apps/meteor/client/lib/chats/ChatAPI.ts",
+ "apps/meteor/client/lib/chats/flows/sendMessage.ts"
+ ],
+ "groundTruthPath": [
+ {
+ "file": "apps/meteor/client/views/room/body/RoomBody.tsx",
+ "symbol": "RoomBody"
+ },
+ {
+ "file": "apps/meteor/client/views/room/composer/ComposerContainer.tsx",
+ "symbol": "ComposerContainer"
+ },
+ {
+ "file": "apps/meteor/client/views/room/composer/ComposerMessage.tsx",
+ "symbol": "onSend"
+ },
+ {
+ "file": "apps/meteor/client/views/room/composer/messageBox/MessageBox.tsx",
+ "symbol": "handleSendMessage"
+ },
+ {
+ "file": "apps/meteor/client/lib/chats/ChatAPI.ts",
+ "symbol": "ChatAPI"
+ },
+ {
+ "file": "apps/meteor/client/lib/chats/flows/sendMessage.ts",
+ "symbol": "sendMessage"
+ }
+ ],
+ "keySymbols": [
+ "handleSendMessage",
+ "onSend",
+ "ChatAPI",
+ "sendMessage",
+ "ComposerMessage"
+ ],
+ "core": [
+ "apps/meteor/client/views/room/body/RoomBody.tsx",
+ "apps/meteor/client/views/room/composer/ComposerContainer.tsx",
+ "apps/meteor/client/views/room/composer/ComposerMessage.tsx",
+ "apps/meteor/client/views/room/composer/messageBox/MessageBox.tsx",
+ "apps/meteor/client/lib/chats/ChatAPI.ts",
+ "apps/meteor/client/lib/chats/flows/sendMessage.ts"
+ ],
+ "supporting": [],
+ "ordered": true
+ },
+ {
+ "id": "new-19-message-rendering",
+ "question": "How is a message rendered from raw text to React components in Rocket.Chat?",
+ "questionType": "architecture",
+ "subsystem": "message rendering",
+ "difficulty": "medium",
+ "source": "claude",
+ "groundTruthFiles": [
+ "packages/message-parser/src/index.ts",
+ "packages/message-parser/src/definitions.ts",
+ "packages/gazzodown/src/Markup.tsx",
+ "packages/gazzodown/src/blocks/ParagraphBlock.tsx",
+ "packages/gazzodown/src/blocks/HeadingBlock.tsx",
+ "packages/gazzodown/src/blocks/QuoteBlock.tsx"
+ ],
+ "groundTruthPath": [
+ {
+ "file": "packages/message-parser/src/index.ts",
+ "symbol": "parse"
+ },
+ {
+ "file": "packages/gazzodown/src/Markup.tsx",
+ "symbol": "Markup"
+ }
+ ],
+ "keySymbols": [
+ "parse",
+ "Markup",
+ "GazzodownText",
+ "MessageContentBody"
+ ],
+ "core": [
+ "packages/message-parser/src/index.ts",
+ "packages/gazzodown/src/Markup.tsx"
+ ],
+ "supporting": [
+ "packages/message-parser/src/definitions.ts",
+ "packages/gazzodown/src/blocks/ParagraphBlock.tsx",
+ "packages/gazzodown/src/blocks/HeadingBlock.tsx",
+ "packages/gazzodown/src/blocks/QuoteBlock.tsx"
+ ],
+ "ordered": true
+ },
+ {
+ "id": "claude-01-push-notifications",
+ "question": "How do push notifications work in Rocket.Chat?",
+ "questionType": "architecture",
+ "subsystem": "push notifications",
+ "difficulty": "hard",
+ "source": "claude",
+ "groundTruthFiles": [
+ "apps/meteor/app/lib/server/lib/sendNotificationsOnMessage.ts",
+ "apps/meteor/app/lib/server/functions/notifications/mobile.js",
+ "apps/meteor/app/notification-queue/server/NotificationQueue.ts",
+ "apps/meteor/app/push/server/push.ts",
+ "apps/meteor/app/push/server/apn.ts",
+ "apps/meteor/app/push/server/fcm.ts"
+ ],
+ "groundTruthPath": [
+ {
+ "file": "apps/meteor/app/lib/server/lib/sendNotificationsOnMessage.ts",
+ "symbol": "sendAllNotifications"
+ },
+ {
+ "file": "apps/meteor/app/lib/server/functions/notifications/mobile.js",
+ "symbol": "shouldNotifyMobile"
+ },
+ {
+ "file": "apps/meteor/app/notification-queue/server/NotificationQueue.ts",
+ "symbol": "NotificationQueue"
+ },
+ {
+ "file": "apps/meteor/app/push/server/push.ts",
+ "symbol": "PushClass"
+ },
+ {
+ "file": "apps/meteor/app/push/server/apn.ts",
+ "symbol": "sendNotificationNative"
+ },
+ {
+ "file": "apps/meteor/app/push/server/fcm.ts",
+ "symbol": "sendNotificationNative"
+ }
+ ],
+ "keySymbols": [
+ "shouldNotifyMobile",
+ "NotificationQueue",
+ "PushNotification",
+ "PushClass",
+ "sendNotificationGateway"
+ ],
+ "core": [
+ "apps/meteor/app/lib/server/lib/sendNotificationsOnMessage.ts",
+ "apps/meteor/app/lib/server/functions/notifications/mobile.js",
+ "apps/meteor/app/notification-queue/server/NotificationQueue.ts",
+ "apps/meteor/app/push/server/push.ts",
+ "apps/meteor/app/push/server/apn.ts",
+ "apps/meteor/app/push/server/fcm.ts"
+ ],
+ "supporting": [],
+ "ordered": true
+ },
+ {
+ "id": "new-09-realtime-streamer",
+ "question": "How does a new message appear in real-time on the client after being saved to the database?",
+ "questionType": "architecture",
+ "subsystem": "streamer",
+ "difficulty": "hard",
+ "source": "claude",
+ "groundTruthFiles": [
+ "apps/meteor/app/lib/server/lib/notifyListener.ts",
+ "apps/meteor/server/modules/listeners/listeners.module.ts",
+ "apps/meteor/server/modules/notifications/notifications.module.ts",
+ "apps/meteor/server/modules/streamer/streamer.module.ts",
+ "apps/meteor/client/lib/streamer/streamer.ts"
+ ],
+ "groundTruthPath": [
+ {
+ "file": "apps/meteor/app/lib/server/lib/notifyListener.ts",
+ "symbol": "notifyOnMessageChange"
+ },
+ {
+ "file": "apps/meteor/server/modules/listeners/listeners.module.ts",
+ "symbol": "listeners"
+ },
+ {
+ "file": "apps/meteor/server/modules/notifications/notifications.module.ts",
+ "symbol": "streamRoomMessage"
+ },
+ {
+ "file": "apps/meteor/server/modules/streamer/streamer.module.ts",
+ "symbol": "Streamer"
+ },
+ {
+ "file": "apps/meteor/client/lib/streamer/streamer.ts",
+ "symbol": "Streamer"
+ }
+ ],
+ "keySymbols": [
+ "notifyOnMessageChange",
+ "StreamerCentral",
+ "Streamer",
+ "streamRoomMessage"
+ ],
+ "core": [
+ "apps/meteor/app/lib/server/lib/notifyListener.ts",
+ "apps/meteor/server/modules/listeners/listeners.module.ts",
+ "apps/meteor/server/modules/notifications/notifications.module.ts",
+ "apps/meteor/server/modules/streamer/streamer.module.ts",
+ "apps/meteor/client/lib/streamer/streamer.ts"
+ ],
+ "supporting": [],
+ "ordered": true
+ },
+ {
+ "id": "tour-05-msg-server",
+ "question": "How is a message sent on the server side in Rocket.Chat?",
+ "questionType": "call-chain",
+ "subsystem": "message chat",
+ "difficulty": "hard",
+ "source": "RC.Guided.Tours",
+ "groundTruthFiles": [
+ "apps/meteor/app/lib/server/methods/sendMessage.ts",
+ "apps/meteor/app/lib/server/functions/sendMessage.ts",
+ "apps/meteor/app/authorization/server/functions/canSendMessage.ts",
+ "apps/meteor/client/lib/chats/ChatAPI.ts",
+ "apps/meteor/app/ui/client/lib/ChatMessages.ts",
+ "apps/meteor/app/lib/client/methods/sendMessage.ts"
+ ],
+ "groundTruthPath": [
+ {
+ "file": "apps/meteor/client/lib/chats/ChatAPI.ts",
+ "symbol": "ChatAPI"
+ },
+ {
+ "file": "apps/meteor/app/ui/client/lib/ChatMessages.ts",
+ "symbol": "ChatMessages"
+ },
+ {
+ "file": "apps/meteor/app/lib/server/methods/sendMessage.ts",
+ "symbol": "sendMessage"
+ },
+ {
+ "file": "apps/meteor/app/lib/server/functions/sendMessage.ts",
+ "symbol": "executeSendMessage"
+ },
+ {
+ "file": "apps/meteor/app/lib/client/methods/sendMessage.ts",
+ "symbol": "sendMessage"
+ }
+ ],
+ "keySymbols": [
+ "executeSendMessage",
+ "sendMessage",
+ "ChatMessages"
+ ],
+ "core": [
+ "apps/meteor/client/lib/chats/ChatAPI.ts",
+ "apps/meteor/app/ui/client/lib/ChatMessages.ts",
+ "apps/meteor/app/lib/server/methods/sendMessage.ts",
+ "apps/meteor/app/lib/server/functions/sendMessage.ts",
+ "apps/meteor/app/lib/client/methods/sendMessage.ts"
+ ],
+ "supporting": [
+ "apps/meteor/app/authorization/server/functions/canSendMessage.ts"
+ ],
+ "ordered": true
+ },
+ {
+ "id": "claude-05-call-chain",
+ "question": "What is the complete call chain for sendMessage?",
+ "questionType": "call-chain",
+ "subsystem": "message chat",
+ "difficulty": "hard",
+ "source": "claude",
+ "groundTruthFiles": [
+ "apps/meteor/client/lib/chats/flows/sendMessage.ts",
+ "apps/meteor/app/lib/server/methods/sendMessage.ts",
+ "apps/meteor/app/api/server/v1/chat.ts",
+ "apps/meteor/app/authorization/server/functions/canSendMessage.ts",
+ "apps/meteor/app/lib/server/functions/sendMessage.ts",
+ "apps/meteor/app/lib/server/lib/afterSaveMessage.ts"
+ ],
+ "groundTruthPath": [
+ {
+ "file": "apps/meteor/client/lib/chats/flows/sendMessage.ts",
+ "symbol": "sendMessage"
+ },
+ {
+ "file": "apps/meteor/app/lib/server/methods/sendMessage.ts",
+ "symbol": "executeSendMessage"
+ },
+ {
+ "file": "apps/meteor/app/api/server/v1/chat.ts",
+ "symbol": "sendMessage"
+ },
+ {
+ "file": "apps/meteor/app/authorization/server/functions/canSendMessage.ts",
+ "symbol": "canSendMessageAsync"
+ },
+ {
+ "file": "apps/meteor/app/authorization/server/functions/canSendMessage.ts",
+ "symbol": "validateRoomMessagePermissionsAsync"
+ },
+ {
+ "file": "apps/meteor/app/lib/server/functions/sendMessage.ts",
+ "symbol": "sendMessage"
+ },
+ {
+ "file": "apps/meteor/app/lib/server/functions/sendMessage.ts",
+ "symbol": "validateMessage"
+ },
+ {
+ "file": "apps/meteor/app/lib/server/lib/afterSaveMessage.ts",
+ "symbol": "afterSaveMessage"
+ }
+ ],
+ "keySymbols": [
+ "executeSendMessage",
+ "canSendMessageAsync",
+ "validateRoomMessagePermissionsAsync",
+ "sendMessage",
+ "validateMessage",
+ "afterSaveMessage",
+ "sendAllNotifications",
+ "NotificationQueue"
+ ],
+ "core": [
+ "apps/meteor/client/lib/chats/flows/sendMessage.ts",
+ "apps/meteor/app/lib/server/methods/sendMessage.ts",
+ "apps/meteor/app/api/server/v1/chat.ts",
+ "apps/meteor/app/authorization/server/functions/canSendMessage.ts",
+ "apps/meteor/app/authorization/server/functions/canSendMessage.ts",
+ "apps/meteor/app/lib/server/functions/sendMessage.ts",
+ "apps/meteor/app/lib/server/functions/sendMessage.ts",
+ "apps/meteor/app/lib/server/lib/afterSaveMessage.ts"
+ ],
+ "supporting": [],
+ "ordered": true
+ },
+ {
+ "id": "new-24-autotranslate",
+ "question": "How does the auto-translate feature work for messages in Rocket.Chat?",
+ "questionType": "locate",
+ "subsystem": "autotranslate",
+ "difficulty": "medium",
+ "source": "claude",
+ "groundTruthFiles": [
+ "apps/meteor/app/autotranslate/server/autotranslate.ts",
+ "apps/meteor/app/autotranslate/server/googleTranslate.ts",
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+ ],
+ "supporting": [
+ "apps/meteor/app/livechat/server/lib/routing/AutoSelection.ts"
+ ],
+ "ordered": true
+ },
+ {
+ "id": "new-26-team",
+ "question": "How does the Team feature work in Rocket.Chat?",
+ "questionType": "locate",
+ "subsystem": "team",
+ "difficulty": "medium",
+ "source": "claude",
+ "groundTruthFiles": [
+ "apps/meteor/server/services/team/service.ts",
+ "packages/core-services/src/types/ITeamService.ts",
+ "packages/core-typings/src/ITeam.ts",
+ "packages/models/src/models/Team.ts",
+ "packages/models/src/models/TeamMember.ts",
+ "apps/meteor/app/lib/server/functions/addUserToRoom.ts"
+ ],
+ "groundTruthPath": [
+ {
+ "file": "apps/meteor/server/services/team/service.ts",
+ "symbol": "TeamService"
+ }
+ ],
+ "keySymbols": [
+ "TeamService",
+ "ITeamService"
+ ],
+ "core": [
+ "apps/meteor/server/services/team/service.ts"
+ ],
+ "supporting": [
+ "packages/core-services/src/types/ITeamService.ts",
+ "packages/core-typings/src/ITeam.ts",
+ "packages/models/src/models/Team.ts",
+ "packages/models/src/models/TeamMember.ts",
+ "apps/meteor/app/lib/server/functions/addUserToRoom.ts"
+ ],
+ "ordered": false
+ }
+ ]
+ }
+ ]
+}
\ No newline at end of file
diff --git a/src/indexer/hasher.ts b/src/indexer/hasher.ts
index 199a91a..e402943 100644
--- a/src/indexer/hasher.ts
+++ b/src/indexer/hasher.ts
@@ -5,9 +5,12 @@ import { GENERATOR_VERSION } from '../config.js';
const VERSION_KEY = '__version__';
+interface FileRecord { hash: string; mtimeMs: number; size: number; }
+type CacheEntry = FileRecord | string; // string = legacy entry (hash only, pre-mtime)
+
export class CodebaseHasher {
private cachePath: string;
- private hashCache: Record;
+ private hashCache: Record;
constructor(cachePath: string) {
this.cachePath = cachePath;
@@ -29,17 +32,36 @@ export class CodebaseHasher {
return crypto.createHash('md5').update(buffer).digest('hex');
}
- shouldUpdate(filePath: string): { needsUpdate: boolean, currentHash: string } {
+ // Legacy string entries carry no mtime/size → return -1 so they never hit the
+ // fast path and get re-hashed once (upgrading them to the new format).
+ private static toMeta(entry: CacheEntry | undefined): FileRecord | undefined {
+ if (!entry) return undefined;
+ if (typeof entry === 'string') return { hash: entry, mtimeMs: -1, size: -1 };
+ return entry;
+ }
+
+ // Fast path: if mtime+size match the cache, the file is unchanged — skip the
+ // read+md5 entirely. Only stat()-changed files get hashed to confirm.
+ shouldUpdate(filePath: string): { needsUpdate: boolean; currentHash: string; mtimeMs: number; size: number } {
+ const stat = fs.statSync(filePath);
+ const prev = CodebaseHasher.toMeta(this.hashCache[filePath]);
+
+ if (prev && prev.mtimeMs === stat.mtimeMs && prev.size === stat.size) {
+ return { needsUpdate: false, currentHash: prev.hash, mtimeMs: stat.mtimeMs, size: stat.size };
+ }
+
const currentHash = CodebaseHasher.getFileHash(filePath);
- const oldHash = this.hashCache[filePath];
- return {
- needsUpdate: oldHash !== currentHash,
- currentHash
- };
+ const changed = !prev || prev.hash !== currentHash;
+ if (!changed) {
+ // content identical but mtime/size drifted (e.g. touched) — refresh metadata
+ // so the next run hits the fast path; no skeleton regen needed.
+ this.hashCache[filePath] = { hash: currentHash, mtimeMs: stat.mtimeMs, size: stat.size };
+ }
+ return { needsUpdate: changed, currentHash, mtimeMs: stat.mtimeMs, size: stat.size };
}
- updateRecord(filePath: string, hash: string) {
- this.hashCache[filePath] = hash;
+ updateRecord(filePath: string, hash: string, mtimeMs: number, size: number) {
+ this.hashCache[filePath] = { hash, mtimeMs, size };
}
prune(allScannedFiles: string[]) {
diff --git a/src/indexer/index.ts b/src/indexer/index.ts
index c9dc4e6..ac991ec 100644
--- a/src/indexer/index.ts
+++ b/src/indexer/index.ts
@@ -16,13 +16,16 @@ export function scanDirectory(dir: string): string[] {
});
}
-export function preWarmCache(): { updatedCount: number; totalFiles: number } {
+export function preWarmCache(): { updatedCount: number; totalFiles: number; changedFiles: string[] } {
if (!fs.existsSync(OUTPUT_DIR)) fs.mkdirSync(OUTPUT_DIR, { recursive: true });
console.error('🚀 Starting Incremental Dehydration...');
const hasher = new CodebaseHasher(CACHE_FILE);
+ console.error(`🔍 Scanning ${TARGET_SRC_DIR} for source files (a few seconds)...`);
const allFiles = scanDirectory(TARGET_SRC_DIR);
+ console.error(` found ${allFiles.length} files — checking for changes...`);
let updatedCount = 0;
+ const changedFiles: string[] = [];
const bar = new cliProgress.SingleBar({
format: ' [{bar}] {value}/{total} | {percentage}% | {filename}',
@@ -33,9 +36,9 @@ export function preWarmCache(): { updatedCount: number; totalFiles: number } {
for (const file of allFiles) {
bar.increment({ filename: path.basename(file) });
- let needsUpdate: boolean, currentHash: string;
+ let needsUpdate: boolean, currentHash: string, mtimeMs: number, size: number;
try {
- ({ needsUpdate, currentHash } = hasher.shouldUpdate(file));
+ ({ needsUpdate, currentHash, mtimeMs, size } = hasher.shouldUpdate(file));
} catch {
continue;
}
@@ -47,8 +50,9 @@ export function preWarmCache(): { updatedCount: number; totalFiles: number } {
if (!fs.existsSync(outDir)) fs.mkdirSync(outDir, { recursive: true });
fs.writeFileSync(skeletonPath, skeleton, 'utf-8');
fs.writeFileSync(mappingPath, JSON.stringify(mapping, null, 2), 'utf-8');
- hasher.updateRecord(file, currentHash);
+ hasher.updateRecord(file, currentHash, mtimeMs, size);
updatedCount++;
+ changedFiles.push(file);
} catch (e) {
console.error(`❌ Failed to process ${file}:`, e);
}
@@ -59,10 +63,97 @@ export function preWarmCache(): { updatedCount: number; totalFiles: number } {
hasher.prune(allFiles);
hasher.save();
console.error(`✨ Pre-warm complete. Updated ${updatedCount} / ${allFiles.length} files.`);
- return { updatedCount, totalFiles: allFiles.length };
+ return { updatedCount, totalFiles: allFiles.length, changedFiles };
}
-export function initializeGlobalIndex() {
+// Apply one mapping.json's contributions to the in-memory index. Shared by full build
+// (initializeGlobalIndex) and incremental patch (incrementalUpdate) so edge semantics stay identical.
+function addMappingToIndex(data: any) {
+ const sourcePath: string = data.sourcePath;
+ GLOBAL_INDEX.allFiles.add(sourcePath);
+
+ (data.symbols ?? []).forEach((s: any) => {
+ if (!GLOBAL_INDEX.symbols.has(s.name)) GLOBAL_INDEX.symbols.set(s.name, new Set());
+ GLOBAL_INDEX.symbols.get(s.name)!.add(sourcePath);
+
+ (s.calls ?? []).forEach((call: any) => {
+ const name: string = typeof call === 'string' ? call : call.name;
+ const edgeType: string = typeof call === 'string' ? 'call' : (call.edgeType ?? 'call');
+ const event: string | undefined = typeof call === 'object' ? call.event : undefined;
+
+ if (edgeType === 'event_listen' && event) {
+ if (!GLOBAL_INDEX.callGraph.has(name)) GLOBAL_INDEX.callGraph.set(name, []);
+ GLOBAL_INDEX.callGraph.get(name)!.push({ caller: event, file: sourcePath, edgeType: 'event_listen' });
+ } else {
+ if (!GLOBAL_INDEX.callGraph.has(name)) GLOBAL_INDEX.callGraph.set(name, []);
+ GLOBAL_INDEX.callGraph.get(name)!.push({ caller: s.name, file: sourcePath, edgeType: edgeType as any });
+ }
+ });
+ });
+
+ (data.imports ?? []).forEach((imp: any) => {
+ if (imp.resolved && imp.resolved !== 'external') {
+ if (!GLOBAL_INDEX.fileDependents.has(imp.resolved)) GLOBAL_INDEX.fileDependents.set(imp.resolved, new Set());
+ GLOBAL_INDEX.fileDependents.get(imp.resolved)!.add(sourcePath);
+ }
+ });
+}
+
+// Patch the loaded index in place for a small set of changed files — instead of re-reading all
+// ~7600 mappings. Strip each changed file's old contributions (one pass each over the three maps),
+// then re-add from its freshly-regenerated mapping.json. Turns minute-scale rebuilds into sub-second.
+// Note: does not handle source-file deletions (rare; covered by a GENERATOR_VERSION full rebuild).
+export function incrementalUpdate(changedFiles: string[]) {
+ const changed = new Set(changedFiles);
+
+ for (const [name, fileSet] of GLOBAL_INDEX.symbols) {
+ for (const f of fileSet) if (changed.has(f)) fileSet.delete(f);
+ if (fileSet.size === 0) GLOBAL_INDEX.symbols.delete(name);
+ }
+ for (const [callee, callers] of GLOBAL_INDEX.callGraph) {
+ const filtered = callers.filter(c => !changed.has(c.file));
+ if (filtered.length === 0) GLOBAL_INDEX.callGraph.delete(callee);
+ else if (filtered.length !== callers.length) GLOBAL_INDEX.callGraph.set(callee, filtered);
+ }
+ for (const [target, importers] of GLOBAL_INDEX.fileDependents) {
+ for (const f of importers) if (changed.has(f)) importers.delete(f);
+ if (importers.size === 0) GLOBAL_INDEX.fileDependents.delete(target);
+ }
+
+ let added = 0;
+ for (const src of changedFiles) {
+ const { mappingPath } = getOutputPaths(src);
+ try {
+ addMappingToIndex(JSON.parse(fs.readFileSync(mappingPath, 'utf-8')));
+ added++;
+ } catch { /* mapping absent if generation failed — skip */ }
+ }
+ console.error(`🔧 Incremental update: patched ${added}/${changedFiles.length} changed mappings.`);
+}
+
+// Single entry point: regenerate stale skeletons, then bring the in-memory index up to date the
+// cheapest correct way — load cache + incremental patch when few files changed, full rebuild only
+// on a cold start or a large change set (e.g. GENERATOR_VERSION bump).
+export async function ensureIndex(): Promise {
+ if (!fs.existsSync(OUTPUT_DIR)) fs.mkdirSync(OUTPUT_DIR, { recursive: true });
+ const db = new LocalDatabase(OUTPUT_DIR);
+ const { changedFiles } = preWarmCache();
+ const loaded = db.loadIndex(GLOBAL_INDEX);
+ const total = GLOBAL_INDEX.allFiles.size;
+ const bigChange = changedFiles.length > Math.max(1500, total * 0.3);
+
+ if (!loaded || bigChange) {
+ await initializeGlobalIndex();
+ db.saveIndex(GLOBAL_INDEX);
+ } else if (changedFiles.length > 0) {
+ incrementalUpdate(changedFiles);
+ db.saveIndex(GLOBAL_INDEX);
+ } else {
+ console.error('⚡ Index loaded from cache (no source changes detected).');
+ }
+}
+
+export async function initializeGlobalIndex() {
console.error('🧠 Building memory-resident index...');
GLOBAL_INDEX.symbols.clear();
GLOBAL_INDEX.fileDependents.clear();
@@ -70,41 +161,26 @@ export function initializeGlobalIndex() {
GLOBAL_INDEX.callGraph.clear();
const mappingFiles = globSync('**/*.mapping.json', { cwd: OUTPUT_DIR, absolute: true });
- for (const mFile of mappingFiles) {
- try {
- const data = JSON.parse(fs.readFileSync(mFile, 'utf-8'));
- const sourcePath: string = data.sourcePath;
- GLOBAL_INDEX.allFiles.add(sourcePath);
-
- (data.symbols ?? []).forEach((s: any) => {
- if (!GLOBAL_INDEX.symbols.has(s.name)) GLOBAL_INDEX.symbols.set(s.name, new Set());
- GLOBAL_INDEX.symbols.get(s.name)!.add(sourcePath);
-
- (s.calls ?? []).forEach((call: any) => {
- const name: string = typeof call === 'string' ? call : call.name;
- const edgeType: string = typeof call === 'string' ? 'call' : (call.edgeType ?? 'call');
- const event: string | undefined = typeof call === 'object' ? call.event : undefined;
-
- if (edgeType === 'event_listen' && event) {
- if (!GLOBAL_INDEX.callGraph.has(name)) GLOBAL_INDEX.callGraph.set(name, []);
- GLOBAL_INDEX.callGraph.get(name)!.push({ caller: event, file: sourcePath, edgeType: 'event_listen' });
- } else {
- if (!GLOBAL_INDEX.callGraph.has(name)) GLOBAL_INDEX.callGraph.set(name, []);
- GLOBAL_INDEX.callGraph.get(name)!.push({ caller: s.name, file: sourcePath, edgeType: edgeType as any });
- }
- });
- });
-
- (data.imports ?? []).forEach((imp: any) => {
- if (imp.resolved && imp.resolved !== 'external') {
- if (!GLOBAL_INDEX.fileDependents.has(imp.resolved)) GLOBAL_INDEX.fileDependents.set(imp.resolved, new Set());
- GLOBAL_INDEX.fileDependents.get(imp.resolved)!.add(sourcePath);
- }
- });
- } catch (e) {
- console.error(`❌ Failed to load mapping ${mFile}:`, e);
- }
+
+ // Read in concurrent batches — the bottleneck is per-file I/O latency (7600 tiny files),
+ // not CPU, so overlapping reads cuts wall time several-fold vs serial readFileSync.
+ const bar = new cliProgress.SingleBar({
+ format: ' [{bar}] {value}/{total} mappings | {percentage}%',
+ clearOnComplete: true, stream: process.stderr,
+ }, cliProgress.Presets.shades_classic);
+ bar.start(mappingFiles.length, 0);
+
+ const BATCH = 128;
+ for (let i = 0; i < mappingFiles.length; i += BATCH) {
+ const slice = mappingFiles.slice(i, i + BATCH);
+ const datas = await Promise.all(slice.map(async (mFile) => {
+ try { return JSON.parse(await fs.promises.readFile(mFile, 'utf-8')); }
+ catch (e) { console.error(`❌ Failed to load mapping ${mFile}:`, e); return null; }
+ }));
+ for (const data of datas) if (data) addMappingToIndex(data);
+ bar.increment(slice.length);
}
+ bar.stop();
console.error(`✅ Index ready: ${GLOBAL_INDEX.symbols.size} symbols, ${GLOBAL_INDEX.allFiles.size} files.`);
}
diff --git a/src/indexer/local-db.ts b/src/indexer/local-db.ts
index a56ae7c..a54c216 100644
--- a/src/indexer/local-db.ts
+++ b/src/indexer/local-db.ts
@@ -28,7 +28,9 @@ export class LocalDatabase {
callGraph: Object.fromEntries(globalIndex.callGraph.entries()),
};
- fs.writeFileSync(this.indexPath, JSON.stringify(data, null, 2));
+ // Compact (no pretty-print): the index is machine-read only. `null, 2` indentation
+ // roughly doubles the size (~24M→~13M) and is markedly slower to stringify+write.
+ fs.writeFileSync(this.indexPath, JSON.stringify(data));
console.error("✅ Index persisted successfully.");
}
@@ -69,11 +71,4 @@ export class LocalDatabase {
});
console.error('👀 Watching index for changes...');
}
-
- clear(outputDir: string) {
- if (fs.existsSync(outputDir)) {
- fs.rmSync(outputDir, { recursive: true, force: true });
- console.error("🧹 Local database cleared.");
- }
- }
}
diff --git a/src/indexer/skeleton.ts b/src/indexer/skeleton.ts
index d66bd75..088530a 100644
--- a/src/indexer/skeleton.ts
+++ b/src/indexer/skeleton.ts
@@ -36,6 +36,9 @@ export class SkeletonGenerator {
this.processImports(sourceFile, filePath, mapping);
+ // Run BEFORE processClasses/processFunctions, which mutate the AST (setBodyText).
+ this.processTopLevel(sourceFile, filePath, mapping);
+
this.processClasses(sourceFile, mapping);
this.processFunctions(sourceFile, mapping);
this.processInterfacesAndTypes(sourceFile, mapping);
@@ -287,6 +290,42 @@ export class SkeletonGenerator {
} catch { /* ignore */ }
}
+ // Module-top-level statements (bare `callbacks.add('afterSaveMessage', (m)=>..., ...)`,
+ // `Meteor.startup(() => {...})`, etc.) are NOT inside any declared function/class/variable,
+ // so the per-symbol extractCalls passes never see them — the most common Rocket.Chat hook
+ // registration pattern was completely invisible to the graph (e.g. notifications listening on
+ // afterSaveMessage). Capture them under a synthetic module symbol (named after the file).
+ private static readonly TOP_LEVEL_SKIP = new Set([
+ SyntaxKind.FunctionDeclaration, SyntaxKind.ClassDeclaration,
+ SyntaxKind.InterfaceDeclaration, SyntaxKind.TypeAliasDeclaration,
+ SyntaxKind.EnumDeclaration, SyntaxKind.ImportDeclaration,
+ SyntaxKind.ExportDeclaration, SyntaxKind.VariableStatement,
+ SyntaxKind.ModuleDeclaration,
+ ]);
+
+ private static processTopLevel(sourceFile: SourceFile, filePath: string, mapping: any) {
+ const moduleName = path.basename(filePath).replace(/\.(tsx?|jsx?)$/, '');
+ const calls = new Map();
+ try {
+ for (const stmt of sourceFile.getStatements()) {
+ if (this.TOP_LEVEL_SKIP.has(stmt.getKind())) continue;
+ for (const c of this.extractCalls(stmt)) {
+ const key = c.event ? `${c.name}:${c.edgeType}:${c.event}` : `${c.name}:${c.edgeType}`;
+ if (!calls.has(key)) calls.set(key, c);
+ }
+ }
+ } catch { /* ignore */ }
+ if (calls.size > 0) {
+ mapping.symbols.push({
+ type: 'module',
+ name: moduleName,
+ exported: false,
+ line: 1,
+ calls: Array.from(calls.values()),
+ });
+ }
+ }
+
private static processImports(sourceFile: SourceFile, filePath: string, mapping: any) {
const dir = path.dirname(filePath);
diff --git a/src/server/index.ts b/src/server/index.ts
index ba9bd9f..78157b8 100644
--- a/src/server/index.ts
+++ b/src/server/index.ts
@@ -3,24 +3,17 @@ import { Server } from '@modelcontextprotocol/sdk/server/index.js';
import { StdioServerTransport } from '@modelcontextprotocol/sdk/server/stdio.js';
import { ListToolsRequestSchema, CallToolRequestSchema } from '@modelcontextprotocol/sdk/types.js';
import { OUTPUT_DIR } from '../config.js';
-import { preWarmCache, initializeGlobalIndex, LocalDatabase } from '../indexer/index.js';
+import { ensureIndex, LocalDatabase } from '../indexer/index.js';
import { TOOL_DEFINITIONS, handleToolCall } from './registry.js';
import { GLOBAL_INDEX } from '../indexer/state.js';
if (!fs.existsSync(OUTPUT_DIR)) fs.mkdirSync(OUTPUT_DIR, { recursive: true });
-const { updatedCount } = preWarmCache();
-
-const db = new LocalDatabase(OUTPUT_DIR);
-if (updatedCount > 0 || !db.loadIndex(GLOBAL_INDEX)) {
- initializeGlobalIndex();
- db.saveIndex(GLOBAL_INDEX);
-} else {
- console.error('⚡ Index loaded from cache (no source changes detected).');
-}
+await ensureIndex();
if (process.argv.includes('--prewarm')) process.exit(0);
+const db = new LocalDatabase(OUTPUT_DIR);
db.watchAndReload(GLOBAL_INDEX);
const server = new Server(
diff --git a/src/server/registry.ts b/src/server/registry.ts
index 37259e5..e463287 100644
--- a/src/server/registry.ts
+++ b/src/server/registry.ts
@@ -1,16 +1,18 @@
import * as fs from 'fs';
import * as path from 'path';
+import { fileURLToPath } from 'url';
import { spawnSync } from 'child_process';
import { CodeRetriever } from './retriever.js';
import { GLOBAL_INDEX } from '../indexer/state.js';
import type { EdgeType } from '../indexer/state.js';
-import { getOutputPaths, TARGET_SRC_DIR } from '../config.js';
+import { TARGET_SRC_DIR } from '../config.js';
const SESSION = {
startTime: Date.now(),
calls: [] as Array<{ tool: string; symbol?: string; tokensReturned: number; ts: number }>,
symbolHits: new Map(),
- totalSkeletonTokens: 0
+ totalSkeletonTokens: 0,
+ hasCalledSearchOrGraph: false,
};
function trackCall(tool: string, response: string, symbol?: string) {
@@ -67,87 +69,38 @@ export const TOOL_DEFINITIONS = [
depth: { type: "number", description: "Max traversal depth (default 4, max 6)" },
layer: { type: "string", enum: ["client", "server", "packages", "ee"], description: "Restrict to this layer." },
mode: { type: "string", enum: ["tree", "impact"], description: "tree=standard tree view (default), impact=layer-by-layer blast radius (use for impact analysis)" },
+ file: { type: "string", description: "Pin the traversal root when the symbol has multiple definitions (collisions like 'Streamer', 'sendMessage'). Pass the exact file path from search results. Omit to auto-pick the most-imported definition." },
edgeTypes: {
type: "array",
items: { type: "string", enum: ["call", "jsx", "new", "event_emit", "event_listen", "pubsub_publish", "pubsub_subscribe", "type"] },
description: "Filter to specific edge types. Default: all types including 'type' edges (TypeScript type annotation references). Example: ['call','event_listen'] to only traverse direct calls and event listeners."
},
- question: { type: "string", description: "Original user question. When provided, enables semantic pruning — edges irrelevant to the question are deprioritized during traversal." }
},
required: ["query"]
}
},
{
name: "implement",
- description: "Step 3 — Read the full source implementation of a specific symbol, plus callee skeletons for downstream context. Call this ONLY after graph has mapped the relationship network. `filename` is REQUIRED — use the exact path returned by search or graph.",
+ description: "Read source implementation. For functions/variables: returns full source. For classes: returns method signatures (skeleton) — use `symbolName='ClassName.methodName'` to read a specific method's full source. Call ONLY after search/graph has located the symbol. `filename` is REQUIRED.",
inputSchema: {
type: "object",
properties: {
- symbolName: { type: "string", description: "Symbol name (e.g. sendMessage, executeSendMessage)" },
- filename: { type: "string", description: "REQUIRED: exact file path from search/explore results (e.g. 'apps/meteor/server/methods/sendMessage.ts')" }
+ symbolName: { type: "string", description: "Symbol name (e.g. 'sendMessage') or class method (e.g. 'RoomService.createRoom')" },
+ filename: { type: "string", description: "REQUIRED: exact file path from search/graph results" }
},
required: ["symbolName", "filename"]
}
}
];
-const ARCHITECTURE_HINTS: Array<{ keywords: string[]; hint: string }> = [
- {
- keywords: ['sendMessage', 'ComposerMessage', 'ComposerContainer', 'MessageBox', 'handleSendMessage', 'onSend', 'RoomComposer'],
- hint: `⚠️ Architecture Note (Flow 1 — Client Message Sending):
-Entry point is RoomBody, NOT sendMessage. Traversing graph up from sendMessage will surface server/federation noise.
-Chain: RoomBody → ComposerContainer → ComposerMessage → MessageBox → sendMessage → sdk.call('sendMessage')
-Use implement on each component in order. graph(sendMessage, up, client) works but start from RoomBody if possible.`,
- },
- {
- keywords: ['executeSendMessage', 'canSendMessage', 'afterSaveMessage', 'beforeSaveMessage'],
- hint: `⚠️ Architecture Note (Flow 2 — Server Message Sending):
-Chain: Meteor.methods(sendMessage) → executeSendMessage → sendMessage(server) → Messages.insertOne → afterSaveMessage callbacks
-Entry file: apps/meteor/app/lib/server/methods/sendMessage.ts`,
- },
- {
- keywords: ['sendNotificationsOnMessage', 'sendNotification', 'sendMessageNotifications'],
- hint: `⚠️ Architecture Note (Flow 4 — Push Notifications):
-Triggered by afterSaveMessage callback chain after DB write.
-Entry: sendNotificationsOnMessage → per-user shouldNotifyMobile/Desktop/Email checks → push queue`,
- },
- {
- keywords: ['StreamerCentral', 'Streamer', 'Meteor.publish', 'registerPublication'],
- hint: `⚠️ Architecture Note (Flow 7 — DDP Subscription/Real-time):
-Client subscribes → server publish initial data → StreamerCentral pushes deltas via DDP WebSocket.
-Entry: apps/meteor/server/modules/streamer/streamer.module.ts`,
- },
- {
- keywords: ['AppManager', 'AppListenerManager', 'RealAppBridges', 'ProxiedApp', 'AppBridge'],
- hint: `⚠️ Architecture Note (Flow 8 — Apps Engine):
-App registers hooks → AppListenerManager fires at event points → Bridge adapts core ↔ App.
-Entry: packages/apps-engine/src/server/AppManager.ts`,
- },
- {
- keywords: ['registerLoginHandler', 'authenticationMiddleware', 'loginWithPassword', 'loginWithLDAP'],
- hint: `⚠️ Architecture Note (Flow 9 — Authentication):
-Client calls Meteor.loginWith*() → server Accounts.registerLoginHandler → returns token → REST uses authenticationMiddleware.
-Entry: apps/meteor/app/authentication/server/index.ts`,
- },
- {
- keywords: ['proxify', 'LocalBroker', 'ServiceClass', 'createService'],
- hint: `⚠️ Special Pattern (core-services Bus):
-Services do NOT call each other directly. Calls go through proxify() → LocalBroker.
-If you can't find an implementation via graph, search for the ServiceClass with matching name.
-Entry: packages/core-services/src/LocalBroker.ts`,
- },
- {
- keywords: ['parse', 'Markup', 'GazzodownText', 'MessageContentBody', 'message-parser'],
- hint: `⚠️ Special Pattern (Message Rendering Pipeline):
-This is a data transformation pipeline, NOT a call chain. graph cannot traverse it.
-Chain: parse() → AST → → →
-Use implement on each step directly.`,
- },
-];
+const __registryDir = path.dirname(fileURLToPath(import.meta.url));
+const ARCHITECTURE: Array<{ keywords: string[]; hint: string }> = JSON.parse(
+ fs.readFileSync(path.resolve(__registryDir, '..', 'architecture.json'), 'utf-8')
+);
function getArchitectureHint(query: string): string | null {
const q = query.toLowerCase();
- for (const { keywords, hint } of ARCHITECTURE_HINTS) {
+ for (const { keywords, hint } of ARCHITECTURE) {
if (keywords.some(k => q.includes(k.toLowerCase()) || k.toLowerCase().includes(q))) {
return hint;
}
@@ -166,9 +119,19 @@ function isTestFile(filePath: string): boolean {
const p = filePath.toLowerCase();
return p.includes('.test.ts') || p.includes('.spec.ts') ||
p.includes('.test.tsx') || p.includes('.spec.tsx') ||
- p.includes('/e2e/') || p.includes('/__tests__/');
+ p.includes('/e2e/') || p.includes('/__tests__/') ||
+ // Test-data/helper files live under /tests/ without a .test suffix, yet are imported by
+ // many other tests → high fan-in. Without this they'd win centrality root selection
+ // (e.g. tests/data/livechat/rooms.ts outranking the real sendMessage definition).
+ p.includes('/tests/') || p.includes('/test/') || p.includes('.mocks.');
}
+// Event/pubsub dependents register via string-keyed dispatch (callbacks.add, Meteor.subscribe…)
+// and do NOT statically import the emitter — so import-based scoping would wrongly drop them.
+// Only static edges (call/new/jsx/type) carry a real import relationship to scope on.
+const DYNAMIC_EDGES = new Set(['event_emit', 'event_listen', 'pubsub_publish', 'pubsub_subscribe']);
+function isDynamicEdge(et: EdgeType): boolean { return DYNAMIC_EDGES.has(et); }
+
function computeImportDistances(startFile: string): Map {
const dist = new Map();
const queue: string[] = [startFile];
@@ -188,6 +151,27 @@ function computeImportDistances(startFile: string): Map {
return dist;
}
+// Choose which definition of a colliding symbol to traverse from.
+// Preference order: explicit file > highest fan-in centrality (most-imported) > non-test.
+// Avoids the old `Array.from(symbolFiles)[0]` (insertion order ≈ random) that traced the wrong
+// definition for collisions like `Streamer` (message streamer vs admin deploy UI).
+function pickRootFile(files: string[], preferredFile?: string): string {
+ if (files.length === 0) return '';
+ if (files.length === 1) return files[0];
+ if (preferredFile) {
+ const q = preferredFile.toLowerCase().replace(/\.tsx?$/, '');
+ const exact = files.find(p => p.toLowerCase().replace(/\.tsx?$/, '').endsWith(q));
+ if (exact) return exact;
+ }
+ return [...files].sort((a, b) => {
+ const ta = isTestFile(a) ? 1 : 0, tb = isTestFile(b) ? 1 : 0;
+ if (ta !== tb) return ta - tb;
+ const ca = GLOBAL_INDEX.fileDependents.get(a)?.size ?? 0;
+ const cb = GLOBAL_INDEX.fileDependents.get(b)?.size ?? 0;
+ return cb - ca;
+ })[0];
+}
+
function filterByLayer(paths: string[], layer: string, strict = false): string[] {
const seg = LAYER_SEGMENTS[layer];
if (!seg) return paths;
@@ -200,6 +184,7 @@ export async function handleToolCall(name: string, args: any): Promise {
switch (name) {
case "search": {
+ SESSION.hasCalledSearchOrGraph = true;
const { query, layer } = args;
if (!query) return err("Missing parameter: query");
@@ -252,8 +237,11 @@ export async function handleToolCall(name: string, args: any): Promise {
sections.push(`📁 Files:\n${pathMatches.join('\n')}`);
}
+ // Run content grep for call-pattern queries, OR as a last resort when the symbol/file
+ // index matched nothing — so a wrong entry-symbol guess still surfaces a file instead of
+ // returning "no results" and letting the agent give up (federation / apps-engine).
const isCallPattern = /[.'"(\s]/.test(query);
- if (isCallPattern) {
+ if (isCallPattern || sections.length === 0) {
const grepArgs = [
'-r', '-n', '-F',
'--include=*.ts', '--include=*.tsx',
@@ -273,11 +261,15 @@ export async function handleToolCall(name: string, args: any): Promise {
byFile.get(rel)!.count++;
}
if (byFile.size > 0) {
- const formatted = Array.from(byFile.entries())
+ const sorted = Array.from(byFile.entries())
+ .sort((a, b) => b[1].count - a[1].count);
+ const top = sorted.slice(0, 10);
+ const formatted = top
.map(([file, { example, count }]) =>
` ${file} (${count} match${count > 1 ? 'es' : ''})\n → ${example}`)
.join('\n');
- sections.push(`🔍 Text matches for "${query}" (${byFile.size} files):\n${formatted}`);
+ const extra = sorted.length > 10 ? `\n … +${sorted.length - 10} more files` : '';
+ sections.push(`🔍 Text matches for "${query}" (${sorted.length} files, top 10 by count):\n${formatted}${extra}`);
}
}
}
@@ -285,16 +277,38 @@ export async function handleToolCall(name: string, args: any): Promise {
if (sections.length === 0) return ok(`No results for "${query}". Try a different keyword.`);
const hint = getArchitectureHint(query);
- const output = hint
+ const body = hint
? `${hint}\n\n---\n\n${sections.join('\n\n')}`
: sections.join('\n\n');
- return ok(output);
+ const navHint = `\n\n💡 **Next:** Use graph("${query}", "down") to trace the call chain, or graph("${query}", "up") to find callers.`;
+ return ok(body + navHint);
}
case "implement": {
const { symbolName, filename } = args;
if (!symbolName) return err("Missing parameter: symbolName");
- if (!filename) return err("Missing parameter: filename — provide the exact file path from search/explore results.");
+ if (!filename) return err("Missing parameter: filename — provide the exact file path from search/graph results.");
+
+ // Enforce: must call search or graph before implement
+ if (!SESSION.hasCalledSearchOrGraph) {
+ return ok(
+ `⚠️ Use search or graph first to locate symbols before reading implementations.\n` +
+ `Example: search("${symbolName}") → find the file → then implement.`
+ );
+ }
+
+ // Support ClassName.methodName syntax
+ if (symbolName.includes('.')) {
+ const [className, methodName] = symbolName.split('.', 2);
+ const method = CodeRetriever.getClassMethod(className, methodName, filename);
+ if (!method) {
+ return ok(`Method "${methodName}" not found in class "${className}" in "${filename}". Use implement("${className}", "${filename}") to see available methods.`);
+ }
+ const rel = method.filePath.split('Rocket.Chat/')[1] || method.filePath;
+ const result = `## ${className}.${methodName} — ${rel}\n\n\`\`\`typescript\n${method.text}\n\`\`\`\n\n💡 **Next:** graph("${methodName}", "down") to trace callees, or graph("${methodName}", "up") to find callers.`;
+ trackCall(name, result, symbolName);
+ return ok(result);
+ }
const impl = CodeRetriever.getImplementation(symbolName, filename);
if (!impl) {
@@ -312,18 +326,22 @@ export async function handleToolCall(name: string, args: any): Promise {
const relativePath = impl.filePath.split('Rocket.Chat/')[1] || impl.filePath;
let result = `## File: ${relativePath}\n\n\`\`\`typescript\n${impl.text}\n\`\`\``;
- const contexts = CodeRetriever.getContext(symbolName, filename);
- const callees = contexts.slice(1);
- if (callees.length > 0) {
- result += `\n\n---\n\n### Callee Skeletons\n\n${callees.join('\n\n---\n\n')}`;
+ // For classes: list methods and hint to use ClassName.methodName
+ if (impl.kind === 'class' && impl.methods && impl.methods.length > 0) {
+ result += `\n\n📋 **Methods (${impl.methods.length}):** ${impl.methods.join(', ')}\n`;
+ result += `💡 To read a specific method: implement("${symbolName}.methodName", "${filename}")`;
}
+ // Navigation hints
+ result += `\n\n💡 **Next:** graph("${symbolName}", "down") to trace callees, or graph("${symbolName}", "up") to find callers.`;
+
trackCall(name, result, symbolName);
return ok(result);
}
case "graph": {
- const { query, direction = "up", depth: rawDepth, layer, mode = "tree", edgeTypes, question } = args;
+ SESSION.hasCalledSearchOrGraph = true;
+ const { query, direction = "up", depth: rawDepth, layer, mode = "tree", edgeTypes, file: preferredFile } = args;
if (!query) return err("Missing parameter: query");
const maxDepth = Math.min(typeof rawDepth === 'number' ? rawDepth : 4, 6);
@@ -364,7 +382,8 @@ export async function handleToolCall(name: string, args: any): Promise {
}
let startFiles = Array.from(symbolFiles);
if (layer) { const f = filterByLayer(startFiles, layer); if (f.length) startFiles = f; }
- const relStart = startFiles[0].split('Rocket.Chat/')[1] || startFiles[0];
+ const rootDown = pickRootFile(startFiles, preferredFile);
+ const relStart = rootDown.split('Rocket.Chat/')[1] || rootDown;
const out: string[] = [
`## Call Graph ↓ downstream of \`${query}\` (depth=${maxDepth})\n`,
@@ -399,8 +418,10 @@ export async function handleToolCall(name: string, args: any): Promise {
traverseDown(query, 1, maxDepth);
if (out.length <= 2) out.push(' (no callees found in index)');
- trackCall(name, out.join('\n'));
- return ok(out.join('\n'));
+ const graphHintDown = getArchitectureHint(query);
+ const graphOutDown = graphHintDown ? `${graphHintDown}\n\n---\n\n${out.join('\n')}` : out.join('\n');
+ trackCall(name, graphOutDown);
+ return ok(graphOutDown);
}
const symbolFiles = GLOBAL_INDEX.symbols.get(query);
@@ -409,13 +430,13 @@ export async function handleToolCall(name: string, args: any): Promise {
}
let relStart = '(unknown file)';
+ let startFile = '';
if (symbolFiles) {
let files = Array.from(symbolFiles);
if (layer) { const f = filterByLayer(files, layer); if (f.length) files = f; }
- relStart = files[0].split('Rocket.Chat/')[1] || files[0];
+ startFile = pickRootFile(files, preferredFile);
+ relStart = startFile.split('Rocket.Chat/')[1] || startFile;
}
-
- const startFile = symbolFiles ? Array.from(symbolFiles)[0] : '';
const importDist = startFile ? computeImportDistances(startFile) : new Map();
const scopeCallers = (
@@ -444,8 +465,11 @@ export async function handleToolCall(name: string, args: any): Promise {
const layerEntries: Array<{ sym: string; file: string; edgeType: EdgeType }> = [];
for (const { sym, file: fromFile } of frontier) {
- let callers = (GLOBAL_INDEX.callGraph.get(sym) ?? []) as Array<{ caller: string; file: string; edgeType: EdgeType }>;
- callers = scopeCallers(callers, fromFile);
+ const allCallers = (GLOBAL_INDEX.callGraph.get(sym) ?? []) as Array<{ caller: string; file: string; edgeType: EdgeType }>;
+ // Scope only static edges by import distance; keep dynamic (event/pubsub) deps unconditionally.
+ const staticScoped = scopeCallers(allCallers.filter(c => !isDynamicEdge(c.edgeType as EdgeType)), fromFile);
+ const dynamic = allCallers.filter(c => isDynamicEdge(c.edgeType as EdgeType));
+ const callers = [...staticScoped, ...dynamic];
for (const { caller, file, edgeType } of callers) {
if (!edgeAllowed(edgeType as EdgeType)) continue;
if (layer && filterByLayer([file], layer, true).length === 0) continue;
@@ -486,8 +510,10 @@ export async function handleToolCall(name: string, args: any): Promise {
}
if (out.length <= 3) out.push(' (no dependents found — symbol may be a leaf node)');
- trackCall(name, out.join('\n'));
- return ok(out.join('\n'));
+ const graphHintImpact = getArchitectureHint(query);
+ const graphOutImpact = graphHintImpact ? `${graphHintImpact}\n\n---\n\n${out.join('\n')}` : out.join('\n');
+ trackCall(name, graphOutImpact);
+ return ok(graphOutImpact);
}
const out: string[] = [
@@ -545,8 +571,10 @@ export async function handleToolCall(name: string, args: any): Promise {
traverseUp(query, startFile || null, 1, maxDepth);
if (out.length <= 2) out.push(' (no callers found — try without layer filter, or check symbol name)');
- trackCall(name, out.join('\n'));
- return ok(out.join('\n'));
+ const graphHintUp = getArchitectureHint(query);
+ const graphOutUp = graphHintUp ? `${graphHintUp}\n\n---\n\n${out.join('\n')}` : out.join('\n');
+ trackCall(name, graphOutUp);
+ return ok(graphOutUp);
}
default:
diff --git a/src/server/retriever.ts b/src/server/retriever.ts
index 5cde699..cceca21 100644
--- a/src/server/retriever.ts
+++ b/src/server/retriever.ts
@@ -1,8 +1,6 @@
import fuzzysort from 'fuzzysort';
-import * as fs from 'fs';
import { Project } from 'ts-morph';
import { GLOBAL_INDEX } from '../indexer/state.js';
-import { getOutputPaths } from '../config.js';
const PATH_HINTS: Array<{ keywords: string[]; segment: string }> = [
{ keywords: ['client', 'ui', 'component', 'react'], segment: 'client' },
@@ -42,99 +40,39 @@ export class CodeRetriever {
.slice(0, limit);
}
- static getContext(symbolName: string, callerFile?: string): string[] {
+ private static resolveFile(symbolName: string, preferredFile?: string): string[] {
const paths = GLOBAL_INDEX.symbols.get(symbolName);
- if (!paths) return [];
-
- let sortedPaths = Array.from(paths);
-
- if (callerFile) {
- const q = callerFile.toLowerCase().replace(/\.tsx?$/, '');
- const exactMatch = sortedPaths.find(p =>
- p.toLowerCase().replace(/\.tsx?$/, '').endsWith(q)
- );
- if (exactMatch) sortedPaths = [exactMatch];
- }
-
- if (callerFile && sortedPaths.length > 1) {
- const callerMappingPath = getOutputPaths(callerFile).mappingPath;
- if (fs.existsSync(callerMappingPath)) {
- try {
- const callerMapping = JSON.parse(fs.readFileSync(callerMappingPath, 'utf-8'));
- const importedPaths = new Set(
- (callerMapping.imports ?? [])
- .filter((imp: any) => imp.resolved && imp.resolved !== 'external')
- .map((imp: any) => imp.resolved)
- );
- sortedPaths.sort((a, b) => (importedPaths.has(a) ? 0 : 1) - (importedPaths.has(b) ? 0 : 1));
- } catch { /* ignore */ }
- }
- }
-
- const results: string[] = [];
- const included = new Set();
- const calleeSymbols = new Set();
-
- for (const sourcePath of sortedPaths) {
- const { skeletonPath, mappingPath } = getOutputPaths(sourcePath);
- if (fs.existsSync(skeletonPath) && !included.has(skeletonPath)) {
- results.push(fs.readFileSync(skeletonPath, 'utf-8'));
- included.add(skeletonPath);
- }
- if (fs.existsSync(mappingPath)) {
- try {
- const mapping = JSON.parse(fs.readFileSync(mappingPath, 'utf-8'));
- const sym = (mapping.symbols ?? []).find(
- (s: any) => s.name === symbolName || s.qualifiedName?.endsWith(`.${symbolName}`)
- );
- sym?.calls?.forEach((c: string) => calleeSymbols.add(c));
- } catch { /* ignore */ }
- }
- }
-
- let calleeCount = 0;
- for (const callee of calleeSymbols) {
- if (calleeCount >= 5) break;
- for (const calleePath of GLOBAL_INDEX.symbols.get(callee) ?? []) {
- const calleeSkeletonPath = getOutputPaths(calleePath).skeletonPath;
- if (fs.existsSync(calleeSkeletonPath) && !included.has(calleeSkeletonPath)) {
- results.push(fs.readFileSync(calleeSkeletonPath, 'utf-8'));
- included.add(calleeSkeletonPath);
- calleeCount++;
- break;
- }
- }
- }
-
- return results;
- }
-
- static getImplementation(symbolName: string, preferredFile?: string): { text: string; filePath: string } | null {
- const paths = GLOBAL_INDEX.symbols.get(symbolName);
- if (!paths || paths.size === 0) return null;
-
- let sortedPaths = Array.from(paths);
-
+ if (!paths || paths.size === 0) return [];
+ let sorted = Array.from(paths);
if (preferredFile) {
const q = preferredFile.toLowerCase().replace(/\.tsx?$/, '');
- const exact = sortedPaths.find(p => p.toLowerCase().replace(/\.tsx?$/, '').endsWith(q));
- if (exact) sortedPaths = [exact];
+ const exact = sorted.find(p => p.toLowerCase().replace(/\.tsx?$/, '').endsWith(q));
+ if (exact) sorted = [exact];
}
+ return sorted;
+ }
+
+ static getImplementation(symbolName: string, preferredFile?: string): { text: string; filePath: string; kind: string; methods?: string[] } | null {
+ const sortedPaths = this.resolveFile(symbolName, preferredFile);
+ if (sortedPaths.length === 0) return null;
for (const filePath of sortedPaths) {
try {
const project = new Project({ skipAddingFilesFromTsConfig: true });
const sourceFile = project.addSourceFileAtPath(filePath);
let text: string | null = null;
+ let kind = 'symbol';
+ let methods: string[] | undefined;
for (const fn of sourceFile.getFunctions()) {
- if (fn.getName() === symbolName) { text = fn.getFullText().trim(); break; }
+ if (fn.getName() === symbolName) { text = fn.getFullText().trim(); kind = 'function'; break; }
}
if (!text) {
for (const v of sourceFile.getVariableDeclarations()) {
if (v.getName() === symbolName) {
text = v.getVariableStatement()?.getFullText().trim() ?? v.getFullText().trim();
+ kind = 'variable';
break;
}
}
@@ -142,26 +80,75 @@ export class CodeRetriever {
if (!text) {
for (const cls of sourceFile.getClasses()) {
- if (cls.getName() === symbolName) { text = cls.getFullText().trim(); break; }
+ if (cls.getName() === symbolName) {
+ kind = 'class';
+ methods = cls.getMethods().map(m => m.getName()).filter(Boolean);
+ // Return skeleton: signatures only, no method bodies
+ const lines: string[] = [];
+ const heritage = cls.getHeritageClauses().map(h => h.getText()).join(' ');
+ lines.push(`class ${symbolName}${heritage ? ' ' + heritage : ''} {`);
+ for (const ctor of cls.getConstructors()) {
+ const params = ctor.getParameters().map(p => p.getText()).join(', ');
+ lines.push(` constructor(${params}) { /* ... */ }`);
+ }
+ for (const prop of cls.getProperties()) {
+ lines.push(` ${prop.getText()};`);
+ }
+ for (const method of cls.getMethods()) {
+ const mods = method.getModifiers().map(m => m.getText()).join(' ');
+ const name = method.getName();
+ const params = method.getParameters().map(p => p.getText()).join(', ');
+ const ret = method.getReturnTypeNode()?.getText() ?? '';
+ lines.push(` ${mods ? mods + ' ' : ''}${name}(${params})${ret ? ': ' + ret : ''} { /* ... */ }`);
+ }
+ lines.push('}');
+ text = lines.join('\n');
+ break;
+ }
}
}
if (!text) {
for (const iface of sourceFile.getInterfaces()) {
- if (iface.getName() === symbolName) { text = iface.getFullText().trim(); break; }
+ if (iface.getName() === symbolName) { text = iface.getFullText().trim(); kind = 'interface'; break; }
}
}
if (!text) {
for (const t of sourceFile.getTypeAliases()) {
- if (t.getName() === symbolName) { text = t.getFullText().trim(); break; }
+ if (t.getName() === symbolName) { text = t.getFullText().trim(); kind = 'type'; break; }
}
}
sourceFile.forget();
- if (text) return { text, filePath };
+ if (text) return { text, filePath, kind, methods };
} catch { /* ignore */ }
}
return null;
}
+
+ static getClassMethod(className: string, methodName: string, preferredFile?: string): { text: string; filePath: string } | null {
+ const sortedPaths = this.resolveFile(className, preferredFile);
+ if (sortedPaths.length === 0) return null;
+
+ for (const filePath of sortedPaths) {
+ try {
+ const project = new Project({ skipAddingFilesFromTsConfig: true });
+ const sourceFile = project.addSourceFileAtPath(filePath);
+ for (const cls of sourceFile.getClasses()) {
+ if (cls.getName() === className) {
+ for (const method of cls.getMethods()) {
+ if (method.getName() === methodName) {
+ const text = method.getFullText().trim();
+ sourceFile.forget();
+ return { text, filePath };
+ }
+ }
+ }
+ }
+ sourceFile.forget();
+ } catch { /* ignore */ }
+ }
+ return null;
+ }
}