diff --git a/renv/activate.R b/renv/activate.R index 2753ae54..6487d062 100644 --- a/renv/activate.R +++ b/renv/activate.R @@ -2,7 +2,8 @@ local({ # the requested version of renv - version <- "1.1.5" + version <- "1.2.2" + attr(version, "md5") <- "bb69b6403b1bad0442657e9e8e57cc83" attr(version, "sha") <- NULL # the project directory @@ -168,6 +169,16 @@ local({ if (quiet) return(invisible()) + # also check for config environment variables that should suppress messages + # https://github.com/rstudio/renv/issues/2214 + enabled <- Sys.getenv("RENV_CONFIG_STARTUP_QUIET", unset = NA) + if (!is.na(enabled) && tolower(enabled) %in% c("true", "1")) + return(invisible()) + + enabled <- Sys.getenv("RENV_CONFIG_SYNCHRONIZED_CHECK", unset = NA) + if (!is.na(enabled) && tolower(enabled) %in% c("false", "0")) + return(invisible()) + msg <- sprintf(fmt, ...) cat(msg, file = stdout(), sep = if (appendLF) "\n" else "") @@ -215,6 +226,20 @@ local({ section <- header(sprintf("Bootstrapping renv %s", friendly)) catf(section) + # ensure the target library path exists; required for file.copy(..., recursive = TRUE) + dir.create(library, showWarnings = FALSE, recursive = TRUE) + + # try to install renv from cache + md5 <- attr(version, "md5", exact = TRUE) + if (length(md5)) { + pkgpath <- renv_bootstrap_find(version) + if (length(pkgpath) && file.exists(pkgpath)) { + ok <- file.copy(pkgpath, library, recursive = TRUE) + if (isTRUE(ok)) + return(invisible()) + } + } + # attempt to download renv catf("- Downloading renv ... ", appendLF = FALSE) withCallingHandlers( @@ -240,7 +265,6 @@ local({ # add empty line to break up bootstrapping from normal output catf("") - return(invisible()) } @@ -257,12 +281,20 @@ local({ repos <- Sys.getenv("RENV_CONFIG_REPOS_OVERRIDE", unset = NA) if (!is.na(repos)) { - # check for RSPM; if set, use a fallback repository for renv - rspm <- Sys.getenv("RSPM", unset = NA) - if (identical(rspm, repos)) - repos <- c(RSPM = rspm, CRAN = cran) + # split on ';' if present + parts <- strsplit(repos, ";", fixed = TRUE)[[1L]] - return(repos) + # split into named repositories if present + idx <- regexpr("=", parts, fixed = TRUE) + keys <- substring(parts, 1L, idx - 1L) + vals <- substring(parts, idx + 1L) + names(vals) <- keys + + # if we have a single unnamed repository, call it CRAN + if (length(vals) == 1L && identical(keys, "")) + names(vals) <- "CRAN" + + return(vals) } @@ -511,6 +543,51 @@ local({ } + renv_bootstrap_find <- function(version) { + + path <- renv_bootstrap_find_cache(version) + if (length(path) && file.exists(path)) { + catf("- Using renv %s from global package cache", version) + return(path) + } + + } + + renv_bootstrap_find_cache <- function(version) { + + md5 <- attr(version, "md5", exact = TRUE) + if (is.null(md5)) + return() + + # infer path to renv cache + cache <- Sys.getenv("RENV_PATHS_CACHE", unset = "") + if (!nzchar(cache)) { + root <- Sys.getenv("RENV_PATHS_ROOT", unset = NA) + if (!is.na(root)) + cache <- file.path(root, "cache") + } + + if (!nzchar(cache)) { + tools <- asNamespace("tools") + if (is.function(tools$R_user_dir)) { + root <- tools$R_user_dir("renv", "cache") + cache <- file.path(root, "cache") + } + } + + # start completing path to cache + file.path( + cache, + renv_bootstrap_cache_version(), + renv_bootstrap_platform_prefix(), + "renv", + version, + md5, + "renv" + ) + + } + renv_bootstrap_download_tarball <- function(version) { # if the user has provided the path to a tarball via @@ -979,7 +1056,7 @@ local({ renv_bootstrap_validate_version_release <- function(version, description) { expected <- description[["Version"]] - is.character(expected) && identical(expected, version) + is.character(expected) && identical(c(expected), c(version)) } renv_bootstrap_hash_text <- function(text) { @@ -1158,6 +1235,21 @@ local({ } renv_bootstrap_run <- function(project, libpath, version) { + tryCatch( + renv_bootstrap_run_impl(project, libpath, version), + error = function(e) { + msg <- paste( + "failed to bootstrap renv: the project will not be loaded.", + paste("Reason:", conditionMessage(e)), + "Use `renv::activate()` to re-initialize the project.", + sep = "\n" + ) + warning(msg, call. = FALSE) + } + ) + } + + renv_bootstrap_run_impl <- function(project, libpath, version) { # perform bootstrap bootstrap(version, libpath) @@ -1181,6 +1273,18 @@ local({ } + renv_bootstrap_cache_version <- function() { + # NOTE: users should normally not override the cache version; + # this is provided just to make testing easier + Sys.getenv("RENV_CACHE_VERSION", unset = "v5") + } + + renv_bootstrap_cache_version_previous <- function() { + version <- renv_bootstrap_cache_version() + number <- as.integer(substring(version, 2L)) + paste("v", number - 1L, sep = "") + } + renv_json_read <- function(file = NULL, text = NULL) { jlerr <- NULL diff --git a/renv/profiles/lesson-requirements/renv.lock b/renv/profiles/lesson-requirements/renv.lock index 538dd905..919eb285 100644 --- a/renv/profiles/lesson-requirements/renv.lock +++ b/renv/profiles/lesson-requirements/renv.lock @@ -1,6 +1,6 @@ { "R": { - "Version": "4.5.1", + "Version": "4.5.3", "Repositories": [ { "Name": "carpentries", @@ -19,7 +19,7 @@ "Packages": { "DiagrammeR": { "Package": "DiagrammeR", - "Version": "1.0.11", + "Version": "1.0.12", "Source": "Repository", "Type": "Package", "Title": "Graph/Network Visualization", @@ -29,14 +29,14 @@ "URL": "https://rich-iannone.github.io/DiagrammeR/, https://github.com/rich-iannone/DiagrammeR", "BugReports": "https://github.com/rich-iannone/DiagrammeR/issues", "Depends": [ - "R (>= 3.2)" + "R (>= 4.1)" ], "Imports": [ "dplyr (>= 1.0.7)", "glue (>= 1.5.0)", "htmltools (>= 0.5.2)", "htmlwidgets (>= 1.5)", - "igraph (>= 1.4.0)", + "igraph (>= 2.0.0)", "magrittr (>= 1.5)", "purrr (>= 0.3.4)", "RColorBrewer (>= 1.1-2)", @@ -63,18 +63,18 @@ "Config/testthat/edition": "3", "Encoding": "UTF-8", "LazyData": "true", - "RoxygenNote": "7.3.1", + "RoxygenNote": "7.3.3", "NeedsCompilation": "no", - "Author": "Richard Iannone [aut, cre] (), Olivier Roy [aut]", + "Author": "Richard Iannone [aut, cre] (ORCID: ), Olivier Roy [aut]", "Maintainer": "Richard Iannone ", - "Repository": "RSPM" + "Repository": "https://packagemanager.posit.co/cran/__linux__/jammy/latest" }, "Matrix": { "Package": "Matrix", - "Version": "1.7-4", + "Version": "1.7-5", "Source": "Repository", "VersionNote": "do also bump src/version.h, inst/include/Matrix/version.h", - "Date": "2025-08-27", + "Date": "2026-03-20", "Priority": "recommended", "Title": "Sparse and Dense Matrix Classes and Methods", "Description": "A rich hierarchy of sparse and dense matrix classes, including general, symmetric, triangular, and diagonal matrices with numeric, logical, or pattern entries. Efficient methods for operating on such matrices, often wrapping the 'BLAS', 'LAPACK', and 'SuiteSparse' libraries.", @@ -112,7 +112,7 @@ "NeedsCompilation": "yes", "Author": "Douglas Bates [aut] (ORCID: ), Martin Maechler [aut, cre] (ORCID: ), Mikael Jagan [aut] (ORCID: ), Timothy A. Davis [ctb] (ORCID: , SuiteSparse libraries, collaborators listed in dir(system.file(\"doc\", \"SuiteSparse\", package=\"Matrix\"), pattern=\"License\", full.names=TRUE, recursive=TRUE)), George Karypis [ctb] (ORCID: , METIS library, Copyright: Regents of the University of Minnesota), Jason Riedy [ctb] (ORCID: , GNU Octave's condest() and onenormest(), Copyright: Regents of the University of California), Jens Oehlschlägel [ctb] (initial nearPD()), R Core Team [ctb] (ROR: , base R's matrix implementation)", "Maintainer": "Martin Maechler ", - "Repository": "CRAN" + "Repository": "https://packagemanager.posit.co/cran/__linux__/jammy/latest" }, "R6": { "Package": "R6", @@ -138,7 +138,7 @@ "NeedsCompilation": "no", "Author": "Winston Chang [aut, cre], Posit Software, PBC [cph, fnd]", "Maintainer": "Winston Chang ", - "Repository": "CRAN" + "Repository": "https://packagemanager.posit.co/cran/__linux__/jammy/latest" }, "RColorBrewer": { "Package": "RColorBrewer", @@ -155,12 +155,11 @@ "Description": "Provides color schemes for maps (and other graphics) designed by Cynthia Brewer as described at http://colorbrewer2.org.", "License": "Apache License 2.0", "NeedsCompilation": "no", - "Repository": "RSPM", - "Encoding": "UTF-8" + "Repository": "CRAN" }, "S7": { "Package": "S7", - "Version": "0.2.0", + "Version": "0.2.2", "Source": "Repository", "Title": "An Object Oriented System Meant to Become a Successor to S3 and S4", "Authors@R": "c( person(\"Object-Oriented Programming Working Group\", role = \"cph\"), person(\"Davis\", \"Vaughan\", role = \"aut\"), person(\"Jim\", \"Hester\", role = \"aut\", comment = c(ORCID = \"0000-0002-2739-7082\")), person(\"Tomasz\", \"Kalinowski\", role = \"aut\"), person(\"Will\", \"Landau\", role = \"aut\"), person(\"Michael\", \"Lawrence\", role = \"aut\"), person(\"Martin\", \"Maechler\", role = \"aut\", comment = c(ORCID = \"0000-0002-8685-9910\")), person(\"Luke\", \"Tierney\", role = \"aut\"), person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0003-4757-117X\")) )", @@ -191,18 +190,19 @@ "Config/testthat/parallel": "TRUE", "Config/testthat/start-first": "external-generic", "Encoding": "UTF-8", - "RoxygenNote": "7.3.2", + "RoxygenNote": "7.3.3", "NeedsCompilation": "yes", - "Author": "Object-Oriented Programming Working Group [cph], Davis Vaughan [aut], Jim Hester [aut] (), Tomasz Kalinowski [aut], Will Landau [aut], Michael Lawrence [aut], Martin Maechler [aut] (), Luke Tierney [aut], Hadley Wickham [aut, cre] ()", + "Author": "Object-Oriented Programming Working Group [cph], Davis Vaughan [aut], Jim Hester [aut] (ORCID: ), Tomasz Kalinowski [aut], Will Landau [aut], Michael Lawrence [aut], Martin Maechler [aut] (ORCID: ), Luke Tierney [aut], Hadley Wickham [aut, cre] (ORCID: )", "Maintainer": "Hadley Wickham ", - "Repository": "https://packagemanager.posit.co/cran/__linux__/jammy/latest" + "Repository": "CRAN" }, "base64enc": { "Package": "base64enc", - "Version": "0.1-3", + "Version": "0.1-6", "Source": "Repository", - "Title": "Tools for base64 encoding", - "Author": "Simon Urbanek ", + "Title": "Tools for 'base64' Encoding", + "Author": "Simon Urbanek [aut, cre, cph] (https://urbanek.nz, ORCID: )", + "Authors@R": "person(\"Simon\", \"Urbanek\", role=c(\"aut\",\"cre\",\"cph\"), email=\"Simon.Urbanek@r-project.org\", comment=c(\"https://urbanek.nz\", ORCID=\"0000-0003-2297-1732\"))", "Maintainer": "Simon Urbanek ", "Depends": [ "R (>= 2.9.0)" @@ -210,12 +210,12 @@ "Enhances": [ "png" ], - "Description": "This package provides tools for handling base64 encoding. It is more flexible than the orphaned base64 package.", + "Description": "Tools for handling 'base64' encoding. It is more flexible than the orphaned 'base64' package.", "License": "GPL-2 | GPL-3", - "URL": "http://www.rforge.net/base64enc", + "URL": "https://www.rforge.net/base64enc", + "BugReports": "https://github.com/s-u/base64enc/issues", "NeedsCompilation": "yes", - "Repository": "RSPM", - "Encoding": "UTF-8" + "Repository": "CRAN" }, "bit": { "Package": "bit", @@ -252,41 +252,43 @@ }, "bit64": { "Package": "bit64", - "Version": "4.6.0-1", + "Version": "4.8.0", "Source": "Repository", "Title": "A S3 Class for Vectors of 64bit Integers", - "Authors@R": "c( person(\"Michael\", \"Chirico\", email = \"michaelchirico4@gmail.com\", role = c(\"aut\", \"cre\")), person(\"Jens\", \"Oehlschlägel\", role = \"aut\"), person(\"Leonardo\", \"Silvestri\", role = \"ctb\"), person(\"Ofek\", \"Shilon\", role = \"ctb\") )", + "Authors@R": "c( person(\"Michael\", \"Chirico\", email=\"michaelchirico4@gmail.com\", role=c(\"aut\", \"cre\")), person(\"Jens\", \"Oehlschlägel\", role=\"aut\"), person(\"Leonardo\", \"Silvestri\", role=\"ctb\"), person(\"Ofek\", \"Shilon\", role=\"ctb\"), person(\"Christian\", \"Ullerich\", role=\"ctb\") )", "Depends": [ - "R (>= 3.4.0)", - "bit (>= 4.0.0)" + "R (>= 3.5.0)" ], "Description": "Package 'bit64' provides serializable S3 atomic 64bit (signed) integers. These are useful for handling database keys and exact counting in +-2^63. WARNING: do not use them as replacement for 32bit integers, integer64 are not supported for subscripting by R-core and they have different semantics when combined with double, e.g. integer64 + double => integer64. Class integer64 can be used in vectors, matrices, arrays and data.frames. Methods are available for coercion from and to logicals, integers, doubles, characters and factors as well as many elementwise and summary functions. Many fast algorithmic operations such as 'match' and 'order' support inter- active data exploration and manipulation and optionally leverage caching.", "License": "GPL-2 | GPL-3", "LazyLoad": "yes", "ByteCompile": "yes", - "URL": "https://github.com/r-lib/bit64", + "URL": "https://github.com/r-lib/bit64, https://bit64.r-lib.org", "Encoding": "UTF-8", "Imports": [ + "bit (>= 4.0.0)", "graphics", "methods", "stats", "utils" ], "Suggests": [ - "testthat (>= 3.0.3)", + "patrick (>= 0.3.0)", + "testthat (>= 3.3.0)", "withr" ], "Config/testthat/edition": "3", - "Config/needs/development": "testthat", - "RoxygenNote": "7.3.2", + "Config/Needs/development": "patrick, testthat", + "Config/Needs/website": "tidyverse/tidytemplate", + "RoxygenNote": "7.3.3", "NeedsCompilation": "yes", - "Author": "Michael Chirico [aut, cre], Jens Oehlschlägel [aut], Leonardo Silvestri [ctb], Ofek Shilon [ctb]", + "Author": "Michael Chirico [aut, cre], Jens Oehlschlägel [aut], Leonardo Silvestri [ctb], Ofek Shilon [ctb], Christian Ullerich [ctb]", "Maintainer": "Michael Chirico ", "Repository": "CRAN" }, "bslib": { "Package": "bslib", - "Version": "0.9.0", + "Version": "0.10.0", "Source": "Repository", "Title": "Custom 'Bootstrap' 'Sass' Themes for 'shiny' and 'rmarkdown'", "Authors@R": "c( person(\"Carson\", \"Sievert\", , \"carson@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-4958-2844\")), person(\"Joe\", \"Cheng\", , \"joe@posit.co\", role = \"aut\"), person(\"Garrick\", \"Aden-Buie\", , \"garrick@posit.co\", role = \"aut\", comment = c(ORCID = \"0000-0002-7111-0077\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")), person(, \"Bootstrap contributors\", role = \"ctb\", comment = \"Bootstrap library\"), person(, \"Twitter, Inc\", role = \"cph\", comment = \"Bootstrap library\"), person(\"Javi\", \"Aguilar\", role = c(\"ctb\", \"cph\"), comment = \"Bootstrap colorpicker library\"), person(\"Thomas\", \"Park\", role = c(\"ctb\", \"cph\"), comment = \"Bootswatch library\"), person(, \"PayPal\", role = c(\"ctb\", \"cph\"), comment = \"Bootstrap accessibility plugin\") )", @@ -312,16 +314,18 @@ "sass (>= 0.4.9)" ], "Suggests": [ + "brand.yml", "bsicons", "curl", "fontawesome", "future", "ggplot2", "knitr", + "lattice", "magrittr", "rappdirs", "rmarkdown (>= 2.7)", - "shiny (> 1.8.1)", + "shiny (>= 1.11.1)", "testthat", "thematic", "tools", @@ -336,12 +340,12 @@ "Config/testthat/parallel": "true", "Config/testthat/start-first": "zzzz-bs-sass, fonts, zzz-precompile, theme-*, rmd-*", "Encoding": "UTF-8", - "RoxygenNote": "7.3.2", - "Collate": "'accordion.R' 'breakpoints.R' 'bs-current-theme.R' 'bs-dependencies.R' 'bs-global.R' 'bs-remove.R' 'bs-theme-layers.R' 'bs-theme-preset-bootswatch.R' 'bs-theme-preset-brand.R' 'bs-theme-preset-builtin.R' 'bs-theme-preset.R' 'utils.R' 'bs-theme-preview.R' 'bs-theme-update.R' 'bs-theme.R' 'bslib-package.R' 'buttons.R' 'card.R' 'deprecated.R' 'files.R' 'fill.R' 'imports.R' 'input-dark-mode.R' 'input-switch.R' 'layout.R' 'nav-items.R' 'nav-update.R' 'navbar_options.R' 'navs-legacy.R' 'navs.R' 'onLoad.R' 'page.R' 'popover.R' 'precompiled.R' 'print.R' 'shiny-devmode.R' 'sidebar.R' 'staticimports.R' 'tooltip.R' 'utils-deps.R' 'utils-shiny.R' 'utils-tags.R' 'value-box.R' 'version-default.R' 'versions.R'", + "RoxygenNote": "7.3.3", + "Collate": "'accordion.R' 'breakpoints.R' 'bs-current-theme.R' 'bs-dependencies.R' 'bs-global.R' 'bs-remove.R' 'bs-theme-layers.R' 'bs-theme-preset-bootswatch.R' 'bs-theme-preset-brand.R' 'bs-theme-preset-builtin.R' 'bs-theme-preset.R' 'utils.R' 'bs-theme-preview.R' 'bs-theme-update.R' 'bs-theme.R' 'bslib-package.R' 'buttons.R' 'card.R' 'deprecated.R' 'files.R' 'fill.R' 'imports.R' 'input-code-editor.R' 'input-dark-mode.R' 'input-submit.R' 'input-switch.R' 'layout.R' 'nav-items.R' 'nav-update.R' 'navbar_options.R' 'navs-legacy.R' 'navs.R' 'onLoad.R' 'page.R' 'popover.R' 'precompiled.R' 'print.R' 'shiny-devmode.R' 'sidebar.R' 'staticimports.R' 'toast.R' 'tooltip.R' 'utils-deps.R' 'utils-shiny.R' 'utils-tags.R' 'value-box.R' 'version-default.R' 'versions.R'", "NeedsCompilation": "no", - "Author": "Carson Sievert [aut, cre] (), Joe Cheng [aut], Garrick Aden-Buie [aut] (), Posit Software, PBC [cph, fnd], Bootstrap contributors [ctb] (Bootstrap library), Twitter, Inc [cph] (Bootstrap library), Javi Aguilar [ctb, cph] (Bootstrap colorpicker library), Thomas Park [ctb, cph] (Bootswatch library), PayPal [ctb, cph] (Bootstrap accessibility plugin)", + "Author": "Carson Sievert [aut, cre] (ORCID: ), Joe Cheng [aut], Garrick Aden-Buie [aut] (ORCID: ), Posit Software, PBC [cph, fnd], Bootstrap contributors [ctb] (Bootstrap library), Twitter, Inc [cph] (Bootstrap library), Javi Aguilar [ctb, cph] (Bootstrap colorpicker library), Thomas Park [ctb, cph] (Bootswatch library), PayPal [ctb, cph] (Bootstrap accessibility plugin)", "Maintainer": "Carson Sievert ", - "Repository": "CRAN" + "Repository": "https://packagemanager.posit.co/cran/__linux__/jammy/latest" }, "cachem": { "Package": "cachem", @@ -371,10 +375,10 @@ }, "cli": { "Package": "cli", - "Version": "3.6.5", + "Version": "3.6.6", "Source": "Repository", "Title": "Helpers for Developing Command Line Interfaces", - "Authors@R": "c( person(\"Gábor\", \"Csárdi\", , \"gabor@posit.co\", role = c(\"aut\", \"cre\")), person(\"Hadley\", \"Wickham\", role = \"ctb\"), person(\"Kirill\", \"Müller\", role = \"ctb\"), person(\"Salim\", \"Brüggemann\", , \"salim-b@pm.me\", role = \"ctb\", comment = c(ORCID = \"0000-0002-5329-5987\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )", + "Authors@R": "c( person(\"Gábor\", \"Csárdi\", , \"gabor@posit.co\", role = c(\"aut\", \"cre\")), person(\"Hadley\", \"Wickham\", role = \"ctb\"), person(\"Kirill\", \"Müller\", role = \"ctb\"), person(\"Salim\", \"Brüggemann\", , \"salim-b@pm.me\", role = \"ctb\", comment = c(ORCID = \"0000-0002-5329-5987\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\"), comment = c(ROR = \"03wc8by49\")) )", "Description": "A suite of tools to build attractive command line interfaces ('CLIs'), from semantic elements: headings, lists, alerts, paragraphs, etc. Supports custom themes via a 'CSS'-like language. It also contains a number of lower level 'CLI' elements: rules, boxes, trees, and 'Unicode' symbols with 'ASCII' alternatives. It support ANSI colors and text styles as well.", "License": "MIT + file LICENSE", "URL": "https://cli.r-lib.org, https://github.com/r-lib/cli", @@ -409,10 +413,11 @@ ], "Config/Needs/website": "r-lib/asciicast, bench, brio, cpp11, decor, desc, fansi, prettyunits, sessioninfo, tidyverse/tidytemplate, usethis, vctrs", "Config/testthat/edition": "3", + "Config/usethis/last-upkeep": "2025-04-25", "Encoding": "UTF-8", - "RoxygenNote": "7.3.2", + "RoxygenNote": "7.3.2.9000", "NeedsCompilation": "yes", - "Author": "Gábor Csárdi [aut, cre], Hadley Wickham [ctb], Kirill Müller [ctb], Salim Brüggemann [ctb] (), Posit Software, PBC [cph, fnd]", + "Author": "Gábor Csárdi [aut, cre], Hadley Wickham [ctb], Kirill Müller [ctb], Salim Brüggemann [ctb] (ORCID: ), Posit Software, PBC [cph, fnd] (ROR: )", "Maintainer": "Gábor Csárdi ", "Repository": "CRAN" }, @@ -449,7 +454,7 @@ }, "cpp11": { "Package": "cpp11", - "Version": "0.5.2", + "Version": "0.5.4", "Source": "Repository", "Title": "A C++11 Interface for R's C Interface", "Authors@R": "c( person(\"Davis\", \"Vaughan\", email = \"davis@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0003-4777-038X\")), person(\"Jim\",\"Hester\", role = \"aut\", comment = c(ORCID = \"0000-0002-2739-7082\")), person(\"Romain\", \"François\", role = \"aut\", comment = c(ORCID = \"0000-0002-2444-4226\")), person(\"Benjamin\", \"Kietzman\", role = \"ctb\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )", @@ -488,9 +493,9 @@ "Config/testthat/edition": "3", "Config/Needs/cpp11/cpp_register": "brio, cli, decor, desc, glue, tibble, vctrs", "Encoding": "UTF-8", - "RoxygenNote": "7.3.2", + "RoxygenNote": "7.3.3", "NeedsCompilation": "no", - "Author": "Davis Vaughan [aut, cre] (), Jim Hester [aut] (), Romain François [aut] (), Benjamin Kietzman [ctb], Posit Software, PBC [cph, fnd]", + "Author": "Davis Vaughan [aut, cre] (ORCID: ), Jim Hester [aut] (ORCID: ), Romain François [aut] (ORCID: ), Benjamin Kietzman [ctb], Posit Software, PBC [cph, fnd]", "Maintainer": "Davis Vaughan ", "Repository": "CRAN" }, @@ -526,13 +531,13 @@ }, "digest": { "Package": "digest", - "Version": "0.6.37", + "Version": "0.6.39", "Source": "Repository", - "Authors@R": "c(person(\"Dirk\", \"Eddelbuettel\", role = c(\"aut\", \"cre\"), email = \"edd@debian.org\", comment = c(ORCID = \"0000-0001-6419-907X\")), person(\"Antoine\", \"Lucas\", role=\"ctb\"), person(\"Jarek\", \"Tuszynski\", role=\"ctb\"), person(\"Henrik\", \"Bengtsson\", role=\"ctb\", comment = c(ORCID = \"0000-0002-7579-5165\")), person(\"Simon\", \"Urbanek\", role=\"ctb\", comment = c(ORCID = \"0000-0003-2297-1732\")), person(\"Mario\", \"Frasca\", role=\"ctb\"), person(\"Bryan\", \"Lewis\", role=\"ctb\"), person(\"Murray\", \"Stokely\", role=\"ctb\"), person(\"Hannes\", \"Muehleisen\", role=\"ctb\"), person(\"Duncan\", \"Murdoch\", role=\"ctb\"), person(\"Jim\", \"Hester\", role=\"ctb\"), person(\"Wush\", \"Wu\", role=\"ctb\", comment = c(ORCID = \"0000-0001-5180-0567\")), person(\"Qiang\", \"Kou\", role=\"ctb\", comment = c(ORCID = \"0000-0001-6786-5453\")), person(\"Thierry\", \"Onkelinx\", role=\"ctb\", comment = c(ORCID = \"0000-0001-8804-4216\")), person(\"Michel\", \"Lang\", role=\"ctb\", comment = c(ORCID = \"0000-0001-9754-0393\")), person(\"Viliam\", \"Simko\", role=\"ctb\"), person(\"Kurt\", \"Hornik\", role=\"ctb\", comment = c(ORCID = \"0000-0003-4198-9911\")), person(\"Radford\", \"Neal\", role=\"ctb\", comment = c(ORCID = \"0000-0002-2473-3407\")), person(\"Kendon\", \"Bell\", role=\"ctb\", comment = c(ORCID = \"0000-0002-9093-8312\")), person(\"Matthew\", \"de Queljoe\", role=\"ctb\"), person(\"Dmitry\", \"Selivanov\", role=\"ctb\"), person(\"Ion\", \"Suruceanu\", role=\"ctb\"), person(\"Bill\", \"Denney\", role=\"ctb\"), person(\"Dirk\", \"Schumacher\", role=\"ctb\"), person(\"András\", \"Svraka\", role=\"ctb\"), person(\"Sergey\", \"Fedorov\", role=\"ctb\"), person(\"Will\", \"Landau\", role=\"ctb\", comment = c(ORCID = \"0000-0003-1878-3253\")), person(\"Floris\", \"Vanderhaeghe\", role=\"ctb\", comment = c(ORCID = \"0000-0002-6378-6229\")), person(\"Kevin\", \"Tappe\", role=\"ctb\"), person(\"Harris\", \"McGehee\", role=\"ctb\"), person(\"Tim\", \"Mastny\", role=\"ctb\"), person(\"Aaron\", \"Peikert\", role=\"ctb\", comment = c(ORCID = \"0000-0001-7813-818X\")), person(\"Mark\", \"van der Loo\", role=\"ctb\", comment = c(ORCID = \"0000-0002-9807-4686\")), person(\"Chris\", \"Muir\", role=\"ctb\", comment = c(ORCID = \"0000-0003-2555-3878\")), person(\"Moritz\", \"Beller\", role=\"ctb\", comment = c(ORCID = \"0000-0003-4852-0526\")), person(\"Sebastian\", \"Campbell\", role=\"ctb\"), person(\"Winston\", \"Chang\", role=\"ctb\", comment = c(ORCID = \"0000-0002-1576-2126\")), person(\"Dean\", \"Attali\", role=\"ctb\", comment = c(ORCID = \"0000-0002-5645-3493\")), person(\"Michael\", \"Chirico\", role=\"ctb\", comment = c(ORCID = \"0000-0003-0787-087X\")), person(\"Kevin\", \"Ushey\", role=\"ctb\"))", - "Date": "2024-08-19", + "Authors@R": "c(person(\"Dirk\", \"Eddelbuettel\", role = c(\"aut\", \"cre\"), email = \"edd@debian.org\", comment = c(ORCID = \"0000-0001-6419-907X\")), person(\"Antoine\", \"Lucas\", role=\"ctb\", comment = c(ORCID = \"0000-0002-8059-9767\")), person(\"Jarek\", \"Tuszynski\", role=\"ctb\"), person(\"Henrik\", \"Bengtsson\", role=\"ctb\", comment = c(ORCID = \"0000-0002-7579-5165\")), person(\"Simon\", \"Urbanek\", role=\"ctb\", comment = c(ORCID = \"0000-0003-2297-1732\")), person(\"Mario\", \"Frasca\", role=\"ctb\"), person(\"Bryan\", \"Lewis\", role=\"ctb\"), person(\"Murray\", \"Stokely\", role=\"ctb\"), person(\"Hannes\", \"Muehleisen\", role=\"ctb\", comment = c(ORCID = \"0000-0001-8552-0029\")), person(\"Duncan\", \"Murdoch\", role=\"ctb\"), person(\"Jim\", \"Hester\", role=\"ctb\", comment = c(ORCID = \"0000-0002-2739-7082\")), person(\"Wush\", \"Wu\", role=\"ctb\", comment = c(ORCID = \"0000-0001-5180-0567\")), person(\"Qiang\", \"Kou\", role=\"ctb\", comment = c(ORCID = \"0000-0001-6786-5453\")), person(\"Thierry\", \"Onkelinx\", role=\"ctb\", comment = c(ORCID = \"0000-0001-8804-4216\")), person(\"Michel\", \"Lang\", role=\"ctb\", comment = c(ORCID = \"0000-0001-9754-0393\")), person(\"Viliam\", \"Simko\", role=\"ctb\"), person(\"Kurt\", \"Hornik\", role=\"ctb\", comment = c(ORCID = \"0000-0003-4198-9911\")), person(\"Radford\", \"Neal\", role=\"ctb\", comment = c(ORCID = \"0000-0002-2473-3407\")), person(\"Kendon\", \"Bell\", role=\"ctb\", comment = c(ORCID = \"0000-0002-9093-8312\")), person(\"Matthew\", \"de Queljoe\", role=\"ctb\"), person(\"Dmitry\", \"Selivanov\", role=\"ctb\", comment = c(ORCID = \"0000-0003-0492-6647\")), person(\"Ion\", \"Suruceanu\", role=\"ctb\", comment = c(ORCID = \"0009-0005-6446-4909\")), person(\"Bill\", \"Denney\", role=\"ctb\", comment = c(ORCID = \"0000-0002-5759-428X\")), person(\"Dirk\", \"Schumacher\", role=\"ctb\"), person(\"András\", \"Svraka\", role=\"ctb\", comment = c(ORCID = \"0009-0008-8480-1329\")), person(\"Sergey\", \"Fedorov\", role=\"ctb\", comment = c(ORCID = \"0000-0002-5970-7233\")), person(\"Will\", \"Landau\", role=\"ctb\", comment = c(ORCID = \"0000-0003-1878-3253\")), person(\"Floris\", \"Vanderhaeghe\", role=\"ctb\", comment = c(ORCID = \"0000-0002-6378-6229\")), person(\"Kevin\", \"Tappe\", role=\"ctb\"), person(\"Harris\", \"McGehee\", role=\"ctb\"), person(\"Tim\", \"Mastny\", role=\"ctb\"), person(\"Aaron\", \"Peikert\", role=\"ctb\", comment = c(ORCID = \"0000-0001-7813-818X\")), person(\"Mark\", \"van der Loo\", role=\"ctb\", comment = c(ORCID = \"0000-0002-9807-4686\")), person(\"Chris\", \"Muir\", role=\"ctb\", comment = c(ORCID = \"0000-0003-2555-3878\")), person(\"Moritz\", \"Beller\", role=\"ctb\", comment = c(ORCID = \"0000-0003-4852-0526\")), person(\"Sebastian\", \"Campbell\", role=\"ctb\", comment = c(ORCID = \"0009-0000-5948-4503\")), person(\"Winston\", \"Chang\", role=\"ctb\", comment = c(ORCID = \"0000-0002-1576-2126\")), person(\"Dean\", \"Attali\", role=\"ctb\", comment = c(ORCID = \"0000-0002-5645-3493\")), person(\"Michael\", \"Chirico\", role=\"ctb\", comment = c(ORCID = \"0000-0003-0787-087X\")), person(\"Kevin\", \"Ushey\", role=\"ctb\", comment = c(ORCID = \"0000-0003-2880-7407\")), person(\"Carl\", \"Pearson\", role=\"ctb\", comment = c(ORCID = \"0000-0003-0701-7860\")))", + "Date": "2025-11-19", "Title": "Create Compact Hash Digests of R Objects", - "Description": "Implementation of a function 'digest()' for the creation of hash digests of arbitrary R objects (using the 'md5', 'sha-1', 'sha-256', 'crc32', 'xxhash', 'murmurhash', 'spookyhash', 'blake3', 'crc32c', 'xxh3_64', and 'xxh3_128' algorithms) permitting easy comparison of R language objects, as well as functions such as'hmac()' to create hash-based message authentication code. Please note that this package is not meant to be deployed for cryptographic purposes for which more comprehensive (and widely tested) libraries such as 'OpenSSL' should be used.", - "URL": "https://github.com/eddelbuettel/digest, https://dirk.eddelbuettel.com/code/digest.html", + "Description": "Implementation of a function 'digest()' for the creation of hash digests of arbitrary R objects (using the 'md5', 'sha-1', 'sha-256', 'crc32', 'xxhash', 'murmurhash', 'spookyhash', 'blake3', 'crc32c', 'xxh3_64', and 'xxh3_128' algorithms) permitting easy comparison of R language objects, as well as functions such as 'hmac()' to create hash-based message authentication code. Please note that this package is not meant to be deployed for cryptographic purposes for which more comprehensive (and widely tested) libraries such as 'OpenSSL' should be used.", + "URL": "https://github.com/eddelbuettel/digest, https://eddelbuettel.github.io/digest/, https://dirk.eddelbuettel.com/code/digest.html", "BugReports": "https://github.com/eddelbuettel/digest/issues", "Depends": [ "R (>= 3.3.0)" @@ -543,18 +548,19 @@ "License": "GPL (>= 2)", "Suggests": [ "tinytest", - "simplermarkdown" + "simplermarkdown", + "rbenchmark" ], "VignetteBuilder": "simplermarkdown", "Encoding": "UTF-8", "NeedsCompilation": "yes", - "Author": "Dirk Eddelbuettel [aut, cre] (), Antoine Lucas [ctb], Jarek Tuszynski [ctb], Henrik Bengtsson [ctb] (), Simon Urbanek [ctb] (), Mario Frasca [ctb], Bryan Lewis [ctb], Murray Stokely [ctb], Hannes Muehleisen [ctb], Duncan Murdoch [ctb], Jim Hester [ctb], Wush Wu [ctb] (), Qiang Kou [ctb] (), Thierry Onkelinx [ctb] (), Michel Lang [ctb] (), Viliam Simko [ctb], Kurt Hornik [ctb] (), Radford Neal [ctb] (), Kendon Bell [ctb] (), Matthew de Queljoe [ctb], Dmitry Selivanov [ctb], Ion Suruceanu [ctb], Bill Denney [ctb], Dirk Schumacher [ctb], András Svraka [ctb], Sergey Fedorov [ctb], Will Landau [ctb] (), Floris Vanderhaeghe [ctb] (), Kevin Tappe [ctb], Harris McGehee [ctb], Tim Mastny [ctb], Aaron Peikert [ctb] (), Mark van der Loo [ctb] (), Chris Muir [ctb] (), Moritz Beller [ctb] (), Sebastian Campbell [ctb], Winston Chang [ctb] (), Dean Attali [ctb] (), Michael Chirico [ctb] (), Kevin Ushey [ctb]", + "Author": "Dirk Eddelbuettel [aut, cre] (ORCID: ), Antoine Lucas [ctb] (ORCID: ), Jarek Tuszynski [ctb], Henrik Bengtsson [ctb] (ORCID: ), Simon Urbanek [ctb] (ORCID: ), Mario Frasca [ctb], Bryan Lewis [ctb], Murray Stokely [ctb], Hannes Muehleisen [ctb] (ORCID: ), Duncan Murdoch [ctb], Jim Hester [ctb] (ORCID: ), Wush Wu [ctb] (ORCID: ), Qiang Kou [ctb] (ORCID: ), Thierry Onkelinx [ctb] (ORCID: ), Michel Lang [ctb] (ORCID: ), Viliam Simko [ctb], Kurt Hornik [ctb] (ORCID: ), Radford Neal [ctb] (ORCID: ), Kendon Bell [ctb] (ORCID: ), Matthew de Queljoe [ctb], Dmitry Selivanov [ctb] (ORCID: ), Ion Suruceanu [ctb] (ORCID: ), Bill Denney [ctb] (ORCID: ), Dirk Schumacher [ctb], András Svraka [ctb] (ORCID: ), Sergey Fedorov [ctb] (ORCID: ), Will Landau [ctb] (ORCID: ), Floris Vanderhaeghe [ctb] (ORCID: ), Kevin Tappe [ctb], Harris McGehee [ctb], Tim Mastny [ctb], Aaron Peikert [ctb] (ORCID: ), Mark van der Loo [ctb] (ORCID: ), Chris Muir [ctb] (ORCID: ), Moritz Beller [ctb] (ORCID: ), Sebastian Campbell [ctb] (ORCID: ), Winston Chang [ctb] (ORCID: ), Dean Attali [ctb] (ORCID: ), Michael Chirico [ctb] (ORCID: ), Kevin Ushey [ctb] (ORCID: ), Carl Pearson [ctb] (ORCID: )", "Maintainer": "Dirk Eddelbuettel ", - "Repository": "RSPM" + "Repository": "CRAN" }, "dplyr": { "Package": "dplyr", - "Version": "1.1.4", + "Version": "1.2.1", "Source": "Repository", "Type": "Package", "Title": "A Grammar of Data Manipulation", @@ -564,27 +570,25 @@ "URL": "https://dplyr.tidyverse.org, https://github.com/tidyverse/dplyr", "BugReports": "https://github.com/tidyverse/dplyr/issues", "Depends": [ - "R (>= 3.5.0)" + "R (>= 4.1.0)" ], "Imports": [ - "cli (>= 3.4.0)", + "cli (>= 3.6.2)", "generics", "glue (>= 1.3.2)", - "lifecycle (>= 1.0.3)", + "lifecycle (>= 1.0.5)", "magrittr (>= 1.5)", "methods", "pillar (>= 1.9.0)", "R6", - "rlang (>= 1.1.0)", + "rlang (>= 1.1.7)", "tibble (>= 3.2.0)", "tidyselect (>= 1.2.0)", "utils", - "vctrs (>= 0.6.4)" + "vctrs (>= 0.7.1)" ], "Suggests": [ - "bench", "broom", - "callr", "covr", "DBI", "dbplyr (>= 2.2.1)", @@ -592,12 +596,9 @@ "knitr", "Lahman", "lobstr", - "microbenchmark", "nycflights13", "purrr", "rmarkdown", - "RMySQL", - "RPostgreSQL", "RSQLite", "stringi (>= 1.7.6)", "testthat (>= 3.1.5)", @@ -605,15 +606,16 @@ "withr" ], "VignetteBuilder": "knitr", - "Config/Needs/website": "tidyverse, shiny, pkgdown, tidyverse/tidytemplate", + "Config/build/compilation-database": "true", + "Config/Needs/website": "tidyverse/tidytemplate", "Config/testthat/edition": "3", "Encoding": "UTF-8", "LazyData": "true", - "RoxygenNote": "7.2.3", + "RoxygenNote": "7.3.3", "NeedsCompilation": "yes", - "Author": "Hadley Wickham [aut, cre] (), Romain François [aut] (), Lionel Henry [aut], Kirill Müller [aut] (), Davis Vaughan [aut] (), Posit Software, PBC [cph, fnd]", + "Author": "Hadley Wickham [aut, cre] (ORCID: ), Romain François [aut] (ORCID: ), Lionel Henry [aut], Kirill Müller [aut] (ORCID: ), Davis Vaughan [aut] (ORCID: ), Posit Software, PBC [cph, fnd]", "Maintainer": "Hadley Wickham ", - "Repository": "RSPM" + "Repository": "https://packagemanager.posit.co/cran/__linux__/jammy/latest" }, "evaluate": { "Package": "evaluate", @@ -731,16 +733,16 @@ }, "fs": { "Package": "fs", - "Version": "1.6.6", + "Version": "2.1.0", "Source": "Repository", "Title": "Cross-Platform File System Operations Based on 'libuv'", - "Authors@R": "c( person(\"Jim\", \"Hester\", role = \"aut\"), person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = \"aut\"), person(\"Gábor\", \"Csárdi\", , \"csardi.gabor@gmail.com\", role = c(\"aut\", \"cre\")), person(\"libuv project contributors\", role = \"cph\", comment = \"libuv library\"), person(\"Joyent, Inc. and other Node contributors\", role = \"cph\", comment = \"libuv library\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )", + "Authors@R": "c( person(\"Jim\", \"Hester\", role = \"aut\"), person(\"Hadley\", \"Wickham\", role = \"aut\"), person(\"Gábor\", \"Csárdi\", role = \"aut\"), person(\"Jeroen\", \"Ooms\", , \"jeroenooms@gmail.com\", role = \"cre\"), person(\"libuv project contributors\", role = \"cph\", comment = \"libuv library\"), person(\"Joyent, Inc. and other Node contributors\", role = \"cph\", comment = \"libuv library\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\"), comment = c(ROR = \"03wc8by49\")) )", "Description": "A cross-platform interface to file system operations, built on top of the 'libuv' C library.", "License": "MIT + file LICENSE", "URL": "https://fs.r-lib.org, https://github.com/r-lib/fs", "BugReports": "https://github.com/r-lib/fs/issues", "Depends": [ - "R (>= 3.6)" + "R (>= 4.1)" ], "Imports": [ "methods" @@ -758,17 +760,17 @@ "withr" ], "VignetteBuilder": "knitr", - "ByteCompile": "true", + "SystemRequirements": "libuv: libuv-devel (rpm) or libuv1-dev (deb). Alternatively to build the vendored libuv 'cmake' is required. GNU make.", "Config/Needs/website": "tidyverse/tidytemplate", "Config/testthat/edition": "3", + "Config/usethis/last-upkeep": "2025-04-23", "Copyright": "file COPYRIGHTS", "Encoding": "UTF-8", "Language": "en-US", - "RoxygenNote": "7.2.3", - "SystemRequirements": "GNU make", + "RoxygenNote": "7.3.3", "NeedsCompilation": "yes", - "Author": "Jim Hester [aut], Hadley Wickham [aut], Gábor Csárdi [aut, cre], libuv project contributors [cph] (libuv library), Joyent, Inc. and other Node contributors [cph] (libuv library), Posit Software, PBC [cph, fnd]", - "Maintainer": "Gábor Csárdi ", + "Author": "Jim Hester [aut], Hadley Wickham [aut], Gábor Csárdi [aut], Jeroen Ooms [cre], libuv project contributors [cph] (libuv library), Joyent, Inc. and other Node contributors [cph] (libuv library), Posit Software, PBC [cph, fnd] (ROR: )", + "Maintainer": "Jeroen Ooms ", "Repository": "CRAN" }, "generics": { @@ -805,7 +807,7 @@ }, "ggplot2": { "Package": "ggplot2", - "Version": "4.0.0", + "Version": "4.0.3", "Source": "Repository", "Title": "Create Elegant Data Visualisations Using the Grammar of Graphics", "Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = \"aut\", comment = c(ORCID = \"0000-0003-4757-117X\")), person(\"Winston\", \"Chang\", role = \"aut\", comment = c(ORCID = \"0000-0002-1576-2126\")), person(\"Lionel\", \"Henry\", role = \"aut\"), person(\"Thomas Lin\", \"Pedersen\", , \"thomas.pedersen@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-5147-4711\")), person(\"Kohske\", \"Takahashi\", role = \"aut\"), person(\"Claus\", \"Wilke\", role = \"aut\", comment = c(ORCID = \"0000-0002-7470-9261\")), person(\"Kara\", \"Woo\", role = \"aut\", comment = c(ORCID = \"0000-0002-5125-4188\")), person(\"Hiroaki\", \"Yutani\", role = \"aut\", comment = c(ORCID = \"0000-0002-3385-7233\")), person(\"Dewey\", \"Dunnington\", role = \"aut\", comment = c(ORCID = \"0000-0002-9415-4582\")), person(\"Teun\", \"van den Brand\", role = \"aut\", comment = c(ORCID = \"0000-0002-9335-7468\")), person(\"Posit, PBC\", role = c(\"cph\", \"fnd\"), comment = c(ROR = \"03wc8by49\")) )", @@ -837,6 +839,7 @@ "ggplot2movies", "hexbin", "Hmisc", + "hms", "knitr", "mapproj", "maps", @@ -847,9 +850,9 @@ "nlme", "profvis", "quantreg", + "quarto", "ragg (>= 1.2.6)", "RColorBrewer", - "rmarkdown", "roxygen2", "rpart", "sf (>= 0.7-3)", @@ -862,31 +865,31 @@ "Enhances": [ "sp" ], - "VignetteBuilder": "knitr", + "VignetteBuilder": "quarto", "Config/Needs/website": "ggtext, tidyr, forcats, tidyverse/tidytemplate", "Config/testthat/edition": "3", "Config/usethis/last-upkeep": "2025-04-23", "Encoding": "UTF-8", "LazyData": "true", - "RoxygenNote": "7.3.2", + "RoxygenNote": "7.3.3", "Collate": "'ggproto.R' 'ggplot-global.R' 'aaa-.R' 'aes-colour-fill-alpha.R' 'aes-evaluation.R' 'aes-group-order.R' 'aes-linetype-size-shape.R' 'aes-position.R' 'all-classes.R' 'compat-plyr.R' 'utilities.R' 'aes.R' 'annotation-borders.R' 'utilities-checks.R' 'legend-draw.R' 'geom-.R' 'annotation-custom.R' 'annotation-logticks.R' 'scale-type.R' 'layer.R' 'make-constructor.R' 'geom-polygon.R' 'geom-map.R' 'annotation-map.R' 'geom-raster.R' 'annotation-raster.R' 'annotation.R' 'autolayer.R' 'autoplot.R' 'axis-secondary.R' 'backports.R' 'bench.R' 'bin.R' 'coord-.R' 'coord-cartesian-.R' 'coord-fixed.R' 'coord-flip.R' 'coord-map.R' 'coord-munch.R' 'coord-polar.R' 'coord-quickmap.R' 'coord-radial.R' 'coord-sf.R' 'coord-transform.R' 'data.R' 'docs_layer.R' 'facet-.R' 'facet-grid-.R' 'facet-null.R' 'facet-wrap.R' 'fortify-map.R' 'fortify-models.R' 'fortify-spatial.R' 'fortify.R' 'stat-.R' 'geom-abline.R' 'geom-rect.R' 'geom-bar.R' 'geom-tile.R' 'geom-bin2d.R' 'geom-blank.R' 'geom-boxplot.R' 'geom-col.R' 'geom-path.R' 'geom-contour.R' 'geom-point.R' 'geom-count.R' 'geom-crossbar.R' 'geom-segment.R' 'geom-curve.R' 'geom-defaults.R' 'geom-ribbon.R' 'geom-density.R' 'geom-density2d.R' 'geom-dotplot.R' 'geom-errorbar.R' 'geom-freqpoly.R' 'geom-function.R' 'geom-hex.R' 'geom-histogram.R' 'geom-hline.R' 'geom-jitter.R' 'geom-label.R' 'geom-linerange.R' 'geom-pointrange.R' 'geom-quantile.R' 'geom-rug.R' 'geom-sf.R' 'geom-smooth.R' 'geom-spoke.R' 'geom-text.R' 'geom-violin.R' 'geom-vline.R' 'ggplot2-package.R' 'grob-absolute.R' 'grob-dotstack.R' 'grob-null.R' 'grouping.R' 'properties.R' 'margins.R' 'theme-elements.R' 'guide-.R' 'guide-axis.R' 'guide-axis-logticks.R' 'guide-axis-stack.R' 'guide-axis-theta.R' 'guide-legend.R' 'guide-bins.R' 'guide-colorbar.R' 'guide-colorsteps.R' 'guide-custom.R' 'guide-none.R' 'guide-old.R' 'guides-.R' 'guides-grid.R' 'hexbin.R' 'import-standalone-obj-type.R' 'import-standalone-types-check.R' 'labeller.R' 'labels.R' 'layer-sf.R' 'layout.R' 'limits.R' 'performance.R' 'plot-build.R' 'plot-construction.R' 'plot-last.R' 'plot.R' 'position-.R' 'position-collide.R' 'position-dodge.R' 'position-dodge2.R' 'position-identity.R' 'position-jitter.R' 'position-jitterdodge.R' 'position-nudge.R' 'position-stack.R' 'quick-plot.R' 'reshape-add-margins.R' 'save.R' 'scale-.R' 'scale-alpha.R' 'scale-binned.R' 'scale-brewer.R' 'scale-colour.R' 'scale-continuous.R' 'scale-date.R' 'scale-discrete-.R' 'scale-expansion.R' 'scale-gradient.R' 'scale-grey.R' 'scale-hue.R' 'scale-identity.R' 'scale-linetype.R' 'scale-linewidth.R' 'scale-manual.R' 'scale-shape.R' 'scale-size.R' 'scale-steps.R' 'scale-view.R' 'scale-viridis.R' 'scales-.R' 'stat-align.R' 'stat-bin.R' 'stat-summary-2d.R' 'stat-bin2d.R' 'stat-bindot.R' 'stat-binhex.R' 'stat-boxplot.R' 'stat-connect.R' 'stat-contour.R' 'stat-count.R' 'stat-density-2d.R' 'stat-density.R' 'stat-ecdf.R' 'stat-ellipse.R' 'stat-function.R' 'stat-identity.R' 'stat-manual.R' 'stat-qq-line.R' 'stat-qq.R' 'stat-quantilemethods.R' 'stat-sf-coordinates.R' 'stat-sf.R' 'stat-smooth-methods.R' 'stat-smooth.R' 'stat-sum.R' 'stat-summary-bin.R' 'stat-summary-hex.R' 'stat-summary.R' 'stat-unique.R' 'stat-ydensity.R' 'summarise-plot.R' 'summary.R' 'theme.R' 'theme-defaults.R' 'theme-current.R' 'theme-sub.R' 'utilities-break.R' 'utilities-grid.R' 'utilities-help.R' 'utilities-patterns.R' 'utilities-resolution.R' 'utilities-tidy-eval.R' 'zxx.R' 'zzz.R'", "NeedsCompilation": "no", "Author": "Hadley Wickham [aut] (ORCID: ), Winston Chang [aut] (ORCID: ), Lionel Henry [aut], Thomas Lin Pedersen [aut, cre] (ORCID: ), Kohske Takahashi [aut], Claus Wilke [aut] (ORCID: ), Kara Woo [aut] (ORCID: ), Hiroaki Yutani [aut] (ORCID: ), Dewey Dunnington [aut] (ORCID: ), Teun van den Brand [aut] (ORCID: ), Posit, PBC [cph, fnd] (ROR: )", "Maintainer": "Thomas Lin Pedersen ", - "Repository": "CRAN" + "Repository": "https://packagemanager.posit.co/cran/__linux__/jammy/latest" }, "glue": { "Package": "glue", - "Version": "1.8.0", + "Version": "1.8.1", "Source": "Repository", "Title": "Interpreted String Literals", - "Authors@R": "c( person(\"Jim\", \"Hester\", role = \"aut\", comment = c(ORCID = \"0000-0002-2739-7082\")), person(\"Jennifer\", \"Bryan\", , \"jenny@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-6983-2759\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )", + "Authors@R": "c( person(\"Jim\", \"Hester\", role = \"aut\", comment = c(ORCID = \"0000-0002-2739-7082\")), person(\"Jennifer\", \"Bryan\", , \"jenny@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-6983-2759\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\"), comment = c(ROR = \"03wc8by49\")) )", "Description": "An implementation of interpreted string literals, inspired by Python's Literal String Interpolation and Docstrings and Julia's Triple-Quoted String Literals .", "License": "MIT + file LICENSE", "URL": "https://glue.tidyverse.org/, https://github.com/tidyverse/glue", "BugReports": "https://github.com/tidyverse/glue/issues", "Depends": [ - "R (>= 3.6)" + "R (>= 4.1)" ], "Imports": [ "methods" @@ -896,7 +899,6 @@ "DBI (>= 1.2.0)", "dplyr", "knitr", - "magrittr", "rlang", "rmarkdown", "RSQLite", @@ -909,12 +911,13 @@ "ByteCompile": "true", "Config/Needs/website": "bench, forcats, ggbeeswarm, ggplot2, R.utils, rprintf, tidyr, tidyverse/tidytemplate", "Config/testthat/edition": "3", + "Config/usethis/last-upkeep": "2026-04-16", "Encoding": "UTF-8", - "RoxygenNote": "7.3.2", + "RoxygenNote": "7.3.3", "NeedsCompilation": "yes", - "Author": "Jim Hester [aut] (), Jennifer Bryan [aut, cre] (), Posit Software, PBC [cph, fnd]", + "Author": "Jim Hester [aut] (ORCID: ), Jennifer Bryan [aut, cre] (ORCID: ), Posit Software, PBC [cph, fnd] (ROR: )", "Maintainer": "Jennifer Bryan ", - "Repository": "RSPM" + "Repository": "CRAN" }, "gtable": { "Package": "gtable", @@ -958,7 +961,7 @@ }, "highr": { "Package": "highr", - "Version": "0.11", + "Version": "0.12", "Source": "Repository", "Type": "Package", "Title": "Syntax Highlighting for R Source Code", @@ -980,11 +983,11 @@ "BugReports": "https://github.com/yihui/highr/issues", "VignetteBuilder": "knitr", "Encoding": "UTF-8", - "RoxygenNote": "7.3.1", + "RoxygenNote": "7.3.3", "NeedsCompilation": "no", - "Author": "Yihui Xie [aut, cre] (), Yixuan Qiu [aut], Christopher Gandrud [ctb], Qiang Li [ctb]", + "Author": "Yihui Xie [aut, cre] (ORCID: ), Yixuan Qiu [aut], Christopher Gandrud [ctb], Qiang Li [ctb]", "Maintainer": "Yihui Xie ", - "Repository": "RSPM" + "Repository": "CRAN" }, "hms": { "Package": "hms", @@ -1022,7 +1025,7 @@ }, "htmltools": { "Package": "htmltools", - "Version": "0.5.8.1", + "Version": "0.5.9", "Source": "Repository", "Type": "Package", "Title": "Tools for HTML", @@ -1056,12 +1059,12 @@ "Config/Needs/check": "knitr", "Config/Needs/website": "rstudio/quillt, bench", "Encoding": "UTF-8", - "RoxygenNote": "7.3.1", + "RoxygenNote": "7.3.3", "Collate": "'colors.R' 'fill.R' 'html_dependency.R' 'html_escape.R' 'html_print.R' 'htmltools-package.R' 'images.R' 'known_tags.R' 'selector.R' 'staticimports.R' 'tag_query.R' 'utils.R' 'tags.R' 'template.R'", "NeedsCompilation": "yes", - "Author": "Joe Cheng [aut], Carson Sievert [aut, cre] (), Barret Schloerke [aut] (), Winston Chang [aut] (), Yihui Xie [aut], Jeff Allen [aut], Posit Software, PBC [cph, fnd]", + "Author": "Joe Cheng [aut], Carson Sievert [aut, cre] (ORCID: ), Barret Schloerke [aut] (ORCID: ), Winston Chang [aut] (ORCID: ), Yihui Xie [aut], Jeff Allen [aut], Posit Software, PBC [cph, fnd]", "Maintainer": "Carson Sievert ", - "Repository": "RSPM" + "Repository": "CRAN" }, "htmlwidgets": { "Package": "htmlwidgets", @@ -1094,14 +1097,14 @@ "NeedsCompilation": "no", "Author": "Ramnath Vaidyanathan [aut, cph], Yihui Xie [aut], JJ Allaire [aut], Joe Cheng [aut], Carson Sievert [aut, cre] (), Kenton Russell [aut, cph], Ellis Hughes [ctb], Posit Software, PBC [cph, fnd]", "Maintainer": "Carson Sievert ", - "Repository": "RSPM" + "Repository": "https://packagemanager.posit.co/cran/__linux__/jammy/latest" }, "igraph": { "Package": "igraph", - "Version": "2.2.1", + "Version": "2.3.1", "Source": "Repository", "Title": "Network Analysis and Visualization", - "Authors@R": "c( person(\"Gábor\", \"Csárdi\", , \"csardi.gabor@gmail.com\", role = \"aut\", comment = c(ORCID = \"0000-0001-7098-9676\")), person(\"Tamás\", \"Nepusz\", , \"ntamas@gmail.com\", role = \"aut\", comment = c(ORCID = \"0000-0002-1451-338X\")), person(\"Vincent\", \"Traag\", role = \"aut\", comment = c(ORCID = \"0000-0003-3170-3879\")), person(\"Szabolcs\", \"Horvát\", , \"szhorvat@gmail.com\", role = \"aut\", comment = c(ORCID = \"0000-0002-3100-523X\")), person(\"Fabio\", \"Zanini\", , \"fabio.zanini@unsw.edu.au\", role = \"aut\", comment = c(ORCID = \"0000-0001-7097-8539\")), person(\"Daniel\", \"Noom\", role = \"aut\"), person(\"Kirill\", \"Müller\", , \"kirill@cynkra.com\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-1416-3412\")), person(\"Michael\", \"Antonov\", role = \"ctb\"), person(\"Chan Zuckerberg Initiative\", role = \"fnd\", comment = c(ROR = \"02qenvm24\")), person(\"David\", \"Schoch\", , \"david.schoch@cynkra.com\", role = \"aut\", comment = c(ORCID = \"0000-0003-2952-4812\")), person(\"Maëlle\", \"Salmon\", , \"maelle@cynkra.com\", role = \"aut\", comment = c(ORCID = \"0000-0002-2815-0399\")) )", + "Authors@R": "c( person(\"Gábor\", \"Csárdi\", , \"csardi.gabor@gmail.com\", role = \"aut\", comment = c(ORCID = \"0000-0001-7098-9676\")), person(\"Tamás\", \"Nepusz\", , \"ntamas@gmail.com\", role = \"aut\", comment = c(ORCID = \"0000-0002-1451-338X\")), person(\"Vincent\", \"Traag\", role = \"aut\", comment = c(ORCID = \"0000-0003-3170-3879\")), person(\"Szabolcs\", \"Horvát\", , \"szhorvat@gmail.com\", role = \"aut\", comment = c(ORCID = \"0000-0002-3100-523X\")), person(\"Fabio\", \"Zanini\", , \"fabio.zanini@unsw.edu.au\", role = \"aut\", comment = c(ORCID = \"0000-0001-7097-8539\")), person(\"Daniel\", \"Noom\", role = \"aut\"), person(\"Kirill\", \"Müller\", , \"kirill@cynkra.com\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-1416-3412\")), person(\"Michael\", \"Antonov\", role = \"ctb\"), person(\"Chan Zuckerberg Initiative\", role = \"fnd\", comment = c(ROR = \"02qenvm24\")), person(\"David\", \"Schoch\", , \"david.schoch@cynkra.com\", role = \"aut\", comment = c(ORCID = \"0000-0003-2952-4812\")), person(\"Maëlle\", \"Salmon\", , \"maelle@cynkra.com\", role = \"aut\", comment = c(ORCID = \"0000-0002-2815-0399\")), person(\"R Consortium\", role = \"fnd\", comment = c(ROR = \"01z833950\")) )", "Description": "Routines for simple graphs and network analysis. It can handle large graphs very well and provides functions for generating random and regular graphs, graph visualization, centrality methods and much more.", "License": "GPL (>= 2)", "URL": "https://r.igraph.org/, https://igraph.org/, https://igraph.discourse.group/", @@ -1149,8 +1152,9 @@ "Config/build/compilation-database": "false", "Config/build/never-clean": "true", "Config/comment/compilation-database": "Generate manually with pkgload:::generate_db() for faster pkgload::load_all()", - "Config/Needs/build": "r-lib/roxygen2, devtools, irlba, pkgconfig, igraph/igraph.r2cdocs, moodymudskipper/devtag", + "Config/Needs/build": "devtools, irlba, pkgconfig", "Config/Needs/coverage": "covr", + "Config/Needs/roxygen2": "r-lib/roxygen2, igraph/igraph.r2cdocs, moodymudskipper/devtag", "Config/Needs/website": "here, readr, tibble, xmlparsedata, xml2", "Config/testthat/edition": "3", "Config/testthat/parallel": "true", @@ -1159,22 +1163,24 @@ "RoxygenNote": "7.3.3.9000", "SystemRequirements": "libxml2 (optional), glpk (>= 4.57, optional)", "NeedsCompilation": "yes", - "Author": "Gábor Csárdi [aut] (ORCID: ), Tamás Nepusz [aut] (ORCID: ), Vincent Traag [aut] (ORCID: ), Szabolcs Horvát [aut] (ORCID: ), Fabio Zanini [aut] (ORCID: ), Daniel Noom [aut], Kirill Müller [aut, cre] (ORCID: ), Michael Antonov [ctb], Chan Zuckerberg Initiative [fnd] (ROR: ), David Schoch [aut] (ORCID: ), Maëlle Salmon [aut] (ORCID: )", + "Author": "Gábor Csárdi [aut] (ORCID: ), Tamás Nepusz [aut] (ORCID: ), Vincent Traag [aut] (ORCID: ), Szabolcs Horvát [aut] (ORCID: ), Fabio Zanini [aut] (ORCID: ), Daniel Noom [aut], Kirill Müller [aut, cre] (ORCID: ), Michael Antonov [ctb], Chan Zuckerberg Initiative [fnd] (ROR: ), David Schoch [aut] (ORCID: ), Maëlle Salmon [aut] (ORCID: ), R Consortium [fnd] (ROR: )", "Maintainer": "Kirill Müller ", "Repository": "CRAN" }, "isoband": { "Package": "isoband", - "Version": "0.2.7", + "Version": "0.3.0", "Source": "Repository", "Title": "Generate Isolines and Isobands from Regularly Spaced Elevation Grids", - "Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0003-4757-117X\")), person(\"Claus O.\", \"Wilke\", , \"wilke@austin.utexas.edu\", role = \"aut\", comment = c(\"Original author\", ORCID = \"0000-0002-7470-9261\")), person(\"Thomas Lin\", \"Pedersen\", , \"thomasp85@gmail.com\", role = \"aut\", comment = c(ORCID = \"0000-0002-5147-4711\")) )", + "Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = \"aut\", comment = c(ORCID = \"0000-0003-4757-117X\")), person(\"Claus O.\", \"Wilke\", , \"wilke@austin.utexas.edu\", role = \"aut\", comment = c(\"Original author\", ORCID = \"0000-0002-7470-9261\")), person(\"Thomas Lin\", \"Pedersen\", , \"thomas.pedersen@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-5147-4711\")), person(\"Posit, PBC\", role = c(\"cph\", \"fnd\"), comment = c(ROR = \"03wc8by49\")) )", "Description": "A fast C++ implementation to generate contour lines (isolines) and contour polygons (isobands) from regularly spaced grids containing elevation data.", "License": "MIT + file LICENSE", - "URL": "https://isoband.r-lib.org", + "URL": "https://isoband.r-lib.org, https://github.com/r-lib/isoband", "BugReports": "https://github.com/r-lib/isoband/issues", "Imports": [ + "cli", "grid", + "rlang", "utils" ], "Suggests": [ @@ -1182,22 +1188,26 @@ "ggplot2", "knitr", "magick", - "microbenchmark", + "bench", "rmarkdown", "sf", - "testthat", + "testthat (>= 3.0.0)", "xml2" ], "VignetteBuilder": "knitr", "Config/Needs/website": "tidyverse/tidytemplate", "Config/testthat/edition": "3", + "Config/usethis/last-upkeep": "2025-12-05", "Encoding": "UTF-8", - "RoxygenNote": "7.2.3", - "SystemRequirements": "C++11", + "RoxygenNote": "7.3.3", + "Config/build/compilation-database": "true", + "LinkingTo": [ + "cpp11" + ], "NeedsCompilation": "yes", - "Author": "Hadley Wickham [aut, cre] (), Claus O. Wilke [aut] (Original author, ), Thomas Lin Pedersen [aut] ()", - "Maintainer": "Hadley Wickham ", - "Repository": "RSPM" + "Author": "Hadley Wickham [aut] (ORCID: ), Claus O. Wilke [aut] (Original author, ORCID: ), Thomas Lin Pedersen [aut, cre] (ORCID: ), Posit, PBC [cph, fnd] (ROR: )", + "Maintainer": "Thomas Lin Pedersen ", + "Repository": "CRAN" }, "jquerylib": { "Package": "jquerylib", @@ -1253,7 +1263,7 @@ }, "knitr": { "Package": "knitr", - "Version": "1.50", + "Version": "1.51", "Source": "Repository", "Type": "Package", "Title": "A General-Purpose Package for Dynamic Report Generation in R", @@ -1267,12 +1277,11 @@ "highr (>= 0.11)", "methods", "tools", - "xfun (>= 0.51)", + "xfun (>= 0.52)", "yaml (>= 2.1.19)" ], "Suggests": [ "bslib", - "codetools", "DBI (>= 0.4-1)", "digest", "formatR", @@ -1284,6 +1293,8 @@ "magick", "litedown", "markdown (>= 1.3)", + "otel", + "otelsdk", "png", "ragg", "reticulate (>= 1.4)", @@ -1308,10 +1319,10 @@ "Encoding": "UTF-8", "VignetteBuilder": "litedown, knitr", "SystemRequirements": "Package vignettes based on R Markdown v2 or reStructuredText require Pandoc (http://pandoc.org). The function rst2pdf() requires rst2pdf (https://github.com/rst2pdf/rst2pdf).", - "Collate": "'block.R' 'cache.R' 'citation.R' 'hooks-html.R' 'plot.R' 'utils.R' 'defaults.R' 'concordance.R' 'engine.R' 'highlight.R' 'themes.R' 'header.R' 'hooks-asciidoc.R' 'hooks-chunk.R' 'hooks-extra.R' 'hooks-latex.R' 'hooks-md.R' 'hooks-rst.R' 'hooks-textile.R' 'hooks.R' 'output.R' 'package.R' 'pandoc.R' 'params.R' 'parser.R' 'pattern.R' 'rocco.R' 'spin.R' 'table.R' 'template.R' 'utils-conversion.R' 'utils-rd2html.R' 'utils-string.R' 'utils-sweave.R' 'utils-upload.R' 'utils-vignettes.R' 'zzz.R'", - "RoxygenNote": "7.3.2", + "Collate": "'block.R' 'cache.R' 'citation.R' 'hooks-html.R' 'plot.R' 'utils.R' 'defaults.R' 'concordance.R' 'engine.R' 'highlight.R' 'themes.R' 'header.R' 'hooks-asciidoc.R' 'hooks-chunk.R' 'hooks-extra.R' 'hooks-latex.R' 'hooks-md.R' 'hooks-rst.R' 'hooks-textile.R' 'hooks.R' 'otel.R' 'output.R' 'package.R' 'pandoc.R' 'params.R' 'parser.R' 'pattern.R' 'rocco.R' 'spin.R' 'table.R' 'template.R' 'utils-conversion.R' 'utils-rd2html.R' 'utils-string.R' 'utils-sweave.R' 'utils-upload.R' 'utils-vignettes.R' 'zzz.R'", + "RoxygenNote": "7.3.3", "NeedsCompilation": "no", - "Author": "Yihui Xie [aut, cre] (, https://yihui.org), Abhraneel Sarma [ctb], Adam Vogt [ctb], Alastair Andrew [ctb], Alex Zvoleff [ctb], Amar Al-Zubaidi [ctb], Andre Simon [ctb] (the CSS files under inst/themes/ were derived from the Highlight package http://www.andre-simon.de), Aron Atkins [ctb], Aaron Wolen [ctb], Ashley Manton [ctb], Atsushi Yasumoto [ctb] (), Ben Baumer [ctb], Brian Diggs [ctb], Brian Zhang [ctb], Bulat Yapparov [ctb], Cassio Pereira [ctb], Christophe Dervieux [ctb], David Hall [ctb], David Hugh-Jones [ctb], David Robinson [ctb], Doug Hemken [ctb], Duncan Murdoch [ctb], Elio Campitelli [ctb], Ellis Hughes [ctb], Emily Riederer [ctb], Fabian Hirschmann [ctb], Fitch Simeon [ctb], Forest Fang [ctb], Frank E Harrell Jr [ctb] (the Sweavel package at inst/misc/Sweavel.sty), Garrick Aden-Buie [ctb], Gregoire Detrez [ctb], Hadley Wickham [ctb], Hao Zhu [ctb], Heewon Jeon [ctb], Henrik Bengtsson [ctb], Hiroaki Yutani [ctb], Ian Lyttle [ctb], Hodges Daniel [ctb], Jacob Bien [ctb], Jake Burkhead [ctb], James Manton [ctb], Jared Lander [ctb], Jason Punyon [ctb], Javier Luraschi [ctb], Jeff Arnold [ctb], Jenny Bryan [ctb], Jeremy Ashkenas [ctb, cph] (the CSS file at inst/misc/docco-classic.css), Jeremy Stephens [ctb], Jim Hester [ctb], Joe Cheng [ctb], Johannes Ranke [ctb], John Honaker [ctb], John Muschelli [ctb], Jonathan Keane [ctb], JJ Allaire [ctb], Johan Toloe [ctb], Jonathan Sidi [ctb], Joseph Larmarange [ctb], Julien Barnier [ctb], Kaiyin Zhong [ctb], Kamil Slowikowski [ctb], Karl Forner [ctb], Kevin K. Smith [ctb], Kirill Mueller [ctb], Kohske Takahashi [ctb], Lorenz Walthert [ctb], Lucas Gallindo [ctb], Marius Hofert [ctb], Martin Modrák [ctb], Michael Chirico [ctb], Michael Friendly [ctb], Michal Bojanowski [ctb], Michel Kuhlmann [ctb], Miller Patrick [ctb], Nacho Caballero [ctb], Nick Salkowski [ctb], Niels Richard Hansen [ctb], Noam Ross [ctb], Obada Mahdi [ctb], Pavel N. Krivitsky [ctb] (), Pedro Faria [ctb], Qiang Li [ctb], Ramnath Vaidyanathan [ctb], Richard Cotton [ctb], Robert Krzyzanowski [ctb], Rodrigo Copetti [ctb], Romain Francois [ctb], Ruaridh Williamson [ctb], Sagiru Mati [ctb] (), Scott Kostyshak [ctb], Sebastian Meyer [ctb], Sietse Brouwer [ctb], Simon de Bernard [ctb], Sylvain Rousseau [ctb], Taiyun Wei [ctb], Thibaut Assus [ctb], Thibaut Lamadon [ctb], Thomas Leeper [ctb], Tim Mastny [ctb], Tom Torsney-Weir [ctb], Trevor Davis [ctb], Viktoras Veitas [ctb], Weicheng Zhu [ctb], Wush Wu [ctb], Zachary Foster [ctb], Zhian N. Kamvar [ctb] (), Posit Software, PBC [cph, fnd]", + "Author": "Yihui Xie [aut, cre] (ORCID: , URL: https://yihui.org), Abhraneel Sarma [ctb], Adam Vogt [ctb], Alastair Andrew [ctb], Alex Zvoleff [ctb], Amar Al-Zubaidi [ctb], Andre Simon [ctb] (the CSS files under inst/themes/ were derived from the Highlight package http://www.andre-simon.de), Aron Atkins [ctb], Aaron Wolen [ctb], Ashley Manton [ctb], Atsushi Yasumoto [ctb] (ORCID: ), Ben Baumer [ctb], Brian Diggs [ctb], Brian Zhang [ctb], Bulat Yapparov [ctb], Cassio Pereira [ctb], Christophe Dervieux [ctb], David Hall [ctb], David Hugh-Jones [ctb], David Robinson [ctb], Doug Hemken [ctb], Duncan Murdoch [ctb], Elio Campitelli [ctb], Ellis Hughes [ctb], Emily Riederer [ctb], Fabian Hirschmann [ctb], Fitch Simeon [ctb], Forest Fang [ctb], Frank E Harrell Jr [ctb] (the Sweavel package at inst/misc/Sweavel.sty), Garrick Aden-Buie [ctb], Gregoire Detrez [ctb], Hadley Wickham [ctb], Hao Zhu [ctb], Heewon Jeon [ctb], Henrik Bengtsson [ctb], Hiroaki Yutani [ctb], Ian Lyttle [ctb], Hodges Daniel [ctb], Jacob Bien [ctb], Jake Burkhead [ctb], James Manton [ctb], Jared Lander [ctb], Jason Punyon [ctb], Javier Luraschi [ctb], Jeff Arnold [ctb], Jenny Bryan [ctb], Jeremy Ashkenas [ctb, cph] (the CSS file at inst/misc/docco-classic.css), Jeremy Stephens [ctb], Jim Hester [ctb], Joe Cheng [ctb], Johannes Ranke [ctb], John Honaker [ctb], John Muschelli [ctb], Jonathan Keane [ctb], JJ Allaire [ctb], Johan Toloe [ctb], Jonathan Sidi [ctb], Joseph Larmarange [ctb], Julien Barnier [ctb], Kaiyin Zhong [ctb], Kamil Slowikowski [ctb], Karl Forner [ctb], Kevin K. Smith [ctb], Kirill Mueller [ctb], Kohske Takahashi [ctb], Lorenz Walthert [ctb], Lucas Gallindo [ctb], Marius Hofert [ctb], Martin Modrák [ctb], Michael Chirico [ctb], Michael Friendly [ctb], Michal Bojanowski [ctb], Michel Kuhlmann [ctb], Miller Patrick [ctb], Nacho Caballero [ctb], Nick Salkowski [ctb], Niels Richard Hansen [ctb], Noam Ross [ctb], Obada Mahdi [ctb], Pavel N. Krivitsky [ctb] (ORCID: ), Pedro Faria [ctb], Qiang Li [ctb], Ramnath Vaidyanathan [ctb], Richard Cotton [ctb], Robert Krzyzanowski [ctb], Rodrigo Copetti [ctb], Romain Francois [ctb], Ruaridh Williamson [ctb], Sagiru Mati [ctb] (ORCID: ), Scott Kostyshak [ctb], Sebastian Meyer [ctb], Sietse Brouwer [ctb], Simon de Bernard [ctb], Sylvain Rousseau [ctb], Taiyun Wei [ctb], Thibaut Assus [ctb], Thibaut Lamadon [ctb], Thomas Leeper [ctb], Tim Mastny [ctb], Tom Torsney-Weir [ctb], Trevor Davis [ctb], Viktoras Veitas [ctb], Weicheng Zhu [ctb], Wush Wu [ctb], Zachary Foster [ctb], Zhian N. Kamvar [ctb] (ORCID: ), Posit Software, PBC [cph, fnd]", "Maintainer": "Yihui Xie ", "Repository": "CRAN" }, @@ -1332,14 +1343,13 @@ "stats", "graphics" ], - "Repository": "RSPM", - "Encoding": "UTF-8" + "Repository": "CRAN" }, "lattice": { "Package": "lattice", - "Version": "0.22-7", + "Version": "0.22-9", "Source": "Repository", - "Date": "2025-03-31", + "Date": "2026-02-03", "Priority": "recommended", "Title": "Trellis Graphics for R", "Authors@R": "c(person(\"Deepayan\", \"Sarkar\", role = c(\"aut\", \"cre\"), email = \"deepayan.sarkar@r-project.org\", comment = c(ORCID = \"0000-0003-4107-1553\")), person(\"Felix\", \"Andrews\", role = \"ctb\"), person(\"Kevin\", \"Wright\", role = \"ctb\", comment = \"documentation\"), person(\"Neil\", \"Klepeis\", role = \"ctb\"), person(\"Johan\", \"Larsson\", role = \"ctb\", comment = \"miscellaneous improvements\"), person(\"Zhijian (Jason)\", \"Wen\", role = \"cph\", comment = \"filled contour code\"), person(\"Paul\", \"Murrell\", role = \"ctb\", email = \"paul@stat.auckland.ac.nz\"), person(\"Stefan\", \"Eng\", role = \"ctb\", comment = \"violin plot improvements\"), person(\"Achim\", \"Zeileis\", role = \"ctb\", comment = \"modern colors\"), person(\"Alexandre\", \"Courtiol\", role = \"ctb\", comment = \"generics for larrows, lpolygon, lrect and lsegments\") )", @@ -1370,14 +1380,14 @@ "URL": "https://lattice.r-forge.r-project.org/", "BugReports": "https://github.com/deepayan/lattice/issues", "NeedsCompilation": "yes", - "Author": "Deepayan Sarkar [aut, cre] (), Felix Andrews [ctb], Kevin Wright [ctb] (documentation), Neil Klepeis [ctb], Johan Larsson [ctb] (miscellaneous improvements), Zhijian (Jason) Wen [cph] (filled contour code), Paul Murrell [ctb], Stefan Eng [ctb] (violin plot improvements), Achim Zeileis [ctb] (modern colors), Alexandre Courtiol [ctb] (generics for larrows, lpolygon, lrect and lsegments)", + "Author": "Deepayan Sarkar [aut, cre] (ORCID: ), Felix Andrews [ctb], Kevin Wright [ctb] (documentation), Neil Klepeis [ctb], Johan Larsson [ctb] (miscellaneous improvements), Zhijian (Jason) Wen [cph] (filled contour code), Paul Murrell [ctb], Stefan Eng [ctb] (violin plot improvements), Achim Zeileis [ctb] (modern colors), Alexandre Courtiol [ctb] (generics for larrows, lpolygon, lrect and lsegments)", "Maintainer": "Deepayan Sarkar ", - "Repository": "RSPM", + "Repository": "https://packagemanager.posit.co/cran/__linux__/jammy/latest", "Encoding": "UTF-8" }, "lifecycle": { "Package": "lifecycle", - "Version": "1.0.4", + "Version": "1.0.5", "Source": "Repository", "Title": "Manage the Life Cycle of your Package Functions", "Authors@R": "c( person(\"Lionel\", \"Henry\", , \"lionel@posit.co\", role = c(\"aut\", \"cre\")), person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = \"aut\", comment = c(ORCID = \"0000-0003-4757-117X\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )", @@ -1390,35 +1400,34 @@ ], "Imports": [ "cli (>= 3.4.0)", - "glue", "rlang (>= 1.1.0)" ], "Suggests": [ "covr", - "crayon", "knitr", - "lintr", + "lintr (>= 3.1.0)", "rmarkdown", "testthat (>= 3.0.1)", "tibble", "tidyverse", "tools", "vctrs", - "withr" + "withr", + "xml2" ], "VignetteBuilder": "knitr", "Config/Needs/website": "tidyverse/tidytemplate, usethis", "Config/testthat/edition": "3", "Encoding": "UTF-8", - "RoxygenNote": "7.2.1", + "RoxygenNote": "7.3.3", "NeedsCompilation": "no", - "Author": "Lionel Henry [aut, cre], Hadley Wickham [aut] (), Posit Software, PBC [cph, fnd]", + "Author": "Lionel Henry [aut, cre], Hadley Wickham [aut] (ORCID: ), Posit Software, PBC [cph, fnd]", "Maintainer": "Lionel Henry ", - "Repository": "RSPM" + "Repository": "CRAN" }, "magrittr": { "Package": "magrittr", - "Version": "2.0.4", + "Version": "2.0.5", "Source": "Repository", "Type": "Package", "Title": "A Forward-Pipe Operator for R", @@ -1635,11 +1644,11 @@ "NeedsCompilation": "no", "Author": "Gábor Csárdi [aut, cre], Rich FitzJohn [aut], Posit Software, PBC [cph, fnd]", "Maintainer": "Gábor Csárdi ", - "Repository": "RSPM" + "Repository": "https://packagemanager.posit.co/cran/__linux__/jammy/latest" }, "purrr": { "Package": "purrr", - "Version": "1.1.0", + "Version": "1.2.2", "Source": "Repository", "Title": "Functional Programming Tools", "Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0003-4757-117X\")), person(\"Lionel\", \"Henry\", , \"lionel@posit.co\", role = \"aut\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\"), comment = c(ROR = \"https://ror.org/03wc8by49\")) )", @@ -1658,13 +1667,13 @@ "vctrs (>= 0.6.3)" ], "Suggests": [ - "carrier (>= 0.2.0)", + "carrier (>= 0.3.0)", "covr", "dplyr (>= 0.7.8)", "httr", "knitr", "lubridate", - "mirai (>= 2.4.0)", + "mirai (>= 2.5.1)", "rmarkdown", "testthat (>= 3.0.0)", "tibble", @@ -1680,7 +1689,7 @@ "Config/testthat/edition": "3", "Config/testthat/parallel": "TRUE", "Encoding": "UTF-8", - "RoxygenNote": "7.3.2", + "RoxygenNote": "7.3.3", "NeedsCompilation": "yes", "Author": "Hadley Wickham [aut, cre] (ORCID: ), Lionel Henry [aut], Posit Software, PBC [cph, fnd] (ROR: )", "Maintainer": "Hadley Wickham ", @@ -1688,58 +1697,62 @@ }, "rappdirs": { "Package": "rappdirs", - "Version": "0.3.3", + "Version": "0.3.4", "Source": "Repository", "Type": "Package", "Title": "Application Directories: Determine Where to Save Data, Caches, and Logs", - "Authors@R": "c(person(given = \"Hadley\", family = \"Wickham\", role = c(\"trl\", \"cre\", \"cph\"), email = \"hadley@rstudio.com\"), person(given = \"RStudio\", role = \"cph\"), person(given = \"Sridhar\", family = \"Ratnakumar\", role = \"aut\"), person(given = \"Trent\", family = \"Mick\", role = \"aut\"), person(given = \"ActiveState\", role = \"cph\", comment = \"R/appdir.r, R/cache.r, R/data.r, R/log.r translated from appdirs\"), person(given = \"Eddy\", family = \"Petrisor\", role = \"ctb\"), person(given = \"Trevor\", family = \"Davis\", role = c(\"trl\", \"aut\")), person(given = \"Gabor\", family = \"Csardi\", role = \"ctb\"), person(given = \"Gregory\", family = \"Jefferis\", role = \"ctb\"))", + "Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"trl\", \"cre\", \"cph\")), person(\"Sridhar\", \"Ratnakumar\", role = \"aut\"), person(\"Trent\", \"Mick\", role = \"aut\"), person(\"ActiveState\", role = \"cph\", comment = \"R/appdir.r, R/cache.r, R/data.r, R/log.r translated from appdirs\"), person(\"Eddy\", \"Petrisor\", role = \"ctb\"), person(\"Trevor\", \"Davis\", role = c(\"trl\", \"aut\"), comment = c(ORCID = \"0000-0001-6341-4639\")), person(\"Gabor\", \"Csardi\", role = \"ctb\"), person(\"Gregory\", \"Jefferis\", role = \"ctb\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\"), comment = c(ROR = \"03wc8by49\")) )", "Description": "An easy way to determine which directories on the users computer you should use to save data, caches and logs. A port of Python's 'Appdirs' () to R.", "License": "MIT + file LICENSE", "URL": "https://rappdirs.r-lib.org, https://github.com/r-lib/rappdirs", "BugReports": "https://github.com/r-lib/rappdirs/issues", "Depends": [ - "R (>= 3.2)" + "R (>= 4.1)" ], "Suggests": [ - "roxygen2", - "testthat (>= 3.0.0)", "covr", + "roxygen2", + "testthat (>= 3.2.0)", "withr" ], - "Copyright": "Original python appdirs module copyright (c) 2010 ActiveState Software Inc. R port copyright Hadley Wickham, RStudio. See file LICENSE for details.", - "Encoding": "UTF-8", - "RoxygenNote": "7.1.1", + "Config/Needs/website": "tidyverse/tidytemplate", "Config/testthat/edition": "3", + "Config/usethis/last-upkeep": "2025-05-05", + "Copyright": "Original python appdirs module copyright (c) 2010 ActiveState Software Inc. R port copyright Hadley Wickham, Posit, PBC. See file LICENSE for details.", + "Encoding": "UTF-8", + "RoxygenNote": "7.3.3", "NeedsCompilation": "yes", - "Author": "Hadley Wickham [trl, cre, cph], RStudio [cph], Sridhar Ratnakumar [aut], Trent Mick [aut], ActiveState [cph] (R/appdir.r, R/cache.r, R/data.r, R/log.r translated from appdirs), Eddy Petrisor [ctb], Trevor Davis [trl, aut], Gabor Csardi [ctb], Gregory Jefferis [ctb]", - "Maintainer": "Hadley Wickham ", - "Repository": "RSPM" + "Author": "Hadley Wickham [trl, cre, cph], Sridhar Ratnakumar [aut], Trent Mick [aut], ActiveState [cph] (R/appdir.r, R/cache.r, R/data.r, R/log.r translated from appdirs), Eddy Petrisor [ctb], Trevor Davis [trl, aut] (ORCID: ), Gabor Csardi [ctb], Gregory Jefferis [ctb], Posit Software, PBC [cph, fnd] (ROR: )", + "Maintainer": "Hadley Wickham ", + "Repository": "CRAN" }, "readr": { "Package": "readr", - "Version": "2.1.5", + "Version": "2.2.0", "Source": "Repository", "Title": "Read Rectangular Text Data", - "Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = \"aut\"), person(\"Jim\", \"Hester\", role = \"aut\"), person(\"Romain\", \"Francois\", role = \"ctb\"), person(\"Jennifer\", \"Bryan\", , \"jenny@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-6983-2759\")), person(\"Shelby\", \"Bearrows\", role = \"ctb\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")), person(\"https://github.com/mandreyel/\", role = \"cph\", comment = \"mio library\"), person(\"Jukka\", \"Jylänki\", role = c(\"ctb\", \"cph\"), comment = \"grisu3 implementation\"), person(\"Mikkel\", \"Jørgensen\", role = c(\"ctb\", \"cph\"), comment = \"grisu3 implementation\") )", + "Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = \"aut\"), person(\"Jim\", \"Hester\", role = \"aut\"), person(\"Romain\", \"Francois\", role = \"ctb\"), person(\"Jennifer\", \"Bryan\", , \"jenny@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-6983-2759\")), person(\"Shelby\", \"Bearrows\", role = \"ctb\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\"), comment = c(ROR = \"03wc8by49\")), person(\"https://github.com/mandreyel/\", role = \"cph\", comment = \"mio library\"), person(\"Jukka\", \"Jylänki\", role = c(\"ctb\", \"cph\"), comment = \"grisu3 implementation\"), person(\"Mikkel\", \"Jørgensen\", role = c(\"ctb\", \"cph\"), comment = \"grisu3 implementation\") )", "Description": "The goal of 'readr' is to provide a fast and friendly way to read rectangular data (like 'csv', 'tsv', and 'fwf'). It is designed to flexibly parse many types of data found in the wild, while still cleanly failing when data unexpectedly changes.", "License": "MIT + file LICENSE", "URL": "https://readr.tidyverse.org, https://github.com/tidyverse/readr", "BugReports": "https://github.com/tidyverse/readr/issues", "Depends": [ - "R (>= 3.6)" + "R (>= 4.1)" ], "Imports": [ - "cli (>= 3.2.0)", + "cli", "clipr", "crayon", + "glue", "hms (>= 0.4.1)", - "lifecycle (>= 0.2.0)", + "lifecycle", "methods", "R6", "rlang", "tibble", "utils", - "vroom (>= 1.6.0)" + "vroom (>= 1.7.0)", + "withr" ], "Suggests": [ "covr", @@ -1752,7 +1765,6 @@ "testthat (>= 3.2.0)", "tzdb (>= 0.1.1)", "waldo", - "withr", "xml2" ], "LinkingTo": [ @@ -1763,17 +1775,18 @@ "Config/Needs/website": "tidyverse, tidyverse/tidytemplate", "Config/testthat/edition": "3", "Config/testthat/parallel": "false", + "Config/usethis/last-upkeep": "2025-11-14", "Encoding": "UTF-8", "Language": "en-US", - "RoxygenNote": "7.2.3", + "RoxygenNote": "7.3.3", "NeedsCompilation": "yes", - "Author": "Hadley Wickham [aut], Jim Hester [aut], Romain Francois [ctb], Jennifer Bryan [aut, cre] (), Shelby Bearrows [ctb], Posit Software, PBC [cph, fnd], https://github.com/mandreyel/ [cph] (mio library), Jukka Jylänki [ctb, cph] (grisu3 implementation), Mikkel Jørgensen [ctb, cph] (grisu3 implementation)", + "Author": "Hadley Wickham [aut], Jim Hester [aut], Romain Francois [ctb], Jennifer Bryan [aut, cre] (ORCID: ), Shelby Bearrows [ctb], Posit Software, PBC [cph, fnd] (ROR: ), https://github.com/mandreyel/ [cph] (mio library), Jukka Jylänki [ctb, cph] (grisu3 implementation), Mikkel Jørgensen [ctb, cph] (grisu3 implementation)", "Maintainer": "Jennifer Bryan ", - "Repository": "RSPM" + "Repository": "https://packagemanager.posit.co/cran/__linux__/jammy/latest" }, "renv": { "Package": "renv", - "Version": "1.1.5", + "Version": "1.2.2", "Source": "Repository", "Type": "Package", "Title": "Project Environments", @@ -1791,6 +1804,7 @@ "compiler", "covr", "cpp11", + "curl", "devtools", "generics", "gitcreds", @@ -1814,7 +1828,7 @@ "webfakes" ], "Encoding": "UTF-8", - "RoxygenNote": "7.3.2", + "RoxygenNote": "7.3.3", "VignetteBuilder": "knitr", "Config/Needs/website": "tidyverse/tidytemplate", "Config/testthat/edition": "3", @@ -1823,11 +1837,11 @@ "NeedsCompilation": "no", "Author": "Kevin Ushey [aut, cre] (ORCID: ), Hadley Wickham [aut] (ORCID: ), Posit Software, PBC [cph, fnd]", "Maintainer": "Kevin Ushey ", - "Repository": "CRAN" + "Repository": "https://packagemanager.posit.co/cran/__linux__/jammy/latest" }, "rlang": { "Package": "rlang", - "Version": "1.1.6", + "Version": "1.2.0", "Source": "Repository", "Title": "Functions for Base Types and Core R and 'Tidyverse' Features", "Description": "A toolbox for working with base types, core R features like the condition system, and core 'Tidyverse' features like tidy evaluation.", @@ -1836,7 +1850,7 @@ "ByteCompile": "true", "Biarch": "true", "Depends": [ - "R (>= 3.5.0)" + "R (>= 4.0.0)" ], "Imports": [ "utils" @@ -1855,7 +1869,7 @@ "pkgload", "rmarkdown", "stats", - "testthat (>= 3.2.0)", + "testthat (>= 3.3.2)", "tibble", "usethis", "vctrs (>= 0.2.3)", @@ -1865,7 +1879,7 @@ "winch" ], "Encoding": "UTF-8", - "RoxygenNote": "7.3.2", + "RoxygenNote": "7.3.3", "URL": "https://rlang.r-lib.org, https://github.com/r-lib/rlang", "BugReports": "https://github.com/r-lib/rlang/issues", "Config/build/compilation-database": "true", @@ -1878,7 +1892,7 @@ }, "rmarkdown": { "Package": "rmarkdown", - "Version": "2.30", + "Version": "2.31", "Source": "Repository", "Type": "Package", "Title": "Dynamic Documents for R", @@ -1925,16 +1939,16 @@ "Config/Needs/website": "rstudio/quillt, pkgdown", "Config/testthat/edition": "3", "Encoding": "UTF-8", - "RoxygenNote": "7.3.2", + "RoxygenNote": "7.3.3", "SystemRequirements": "pandoc (>= 1.14) - http://pandoc.org", "NeedsCompilation": "no", "Author": "JJ Allaire [aut], Yihui Xie [aut, cre] (ORCID: ), Christophe Dervieux [aut] (ORCID: ), Jonathan McPherson [aut], Javier Luraschi [aut], Kevin Ushey [aut], Aron Atkins [aut], Hadley Wickham [aut], Joe Cheng [aut], Winston Chang [aut], Richard Iannone [aut] (ORCID: ), Andrew Dunning [ctb] (ORCID: ), Atsushi Yasumoto [ctb, cph] (ORCID: , cph: Number sections Lua filter), Barret Schloerke [ctb], Carson Sievert [ctb] (ORCID: ), Devon Ryan [ctb] (ORCID: ), Frederik Aust [ctb] (ORCID: ), Jeff Allen [ctb], JooYoung Seo [ctb] (ORCID: ), Malcolm Barrett [ctb], Rob Hyndman [ctb], Romain Lesur [ctb], Roy Storey [ctb], Ruben Arslan [ctb], Sergio Oller [ctb], Posit Software, PBC [cph, fnd], jQuery UI contributors [ctb, cph] (jQuery UI library; authors listed in inst/rmd/h/jqueryui/AUTHORS.txt), Mark Otto [ctb] (Bootstrap library), Jacob Thornton [ctb] (Bootstrap library), Bootstrap contributors [ctb] (Bootstrap library), Twitter, Inc [cph] (Bootstrap library), Alexander Farkas [ctb, cph] (html5shiv library), Scott Jehl [ctb, cph] (Respond.js library), Ivan Sagalaev [ctb, cph] (highlight.js library), Greg Franko [ctb, cph] (tocify library), John MacFarlane [ctb, cph] (Pandoc templates), Google, Inc. [ctb, cph] (ioslides library), Dave Raggett [ctb] (slidy library), W3C [cph] (slidy library), Dave Gandy [ctb, cph] (Font-Awesome), Ben Sperry [ctb] (Ionicons), Drifty [cph] (Ionicons), Aidan Lister [ctb, cph] (jQuery StickyTabs), Benct Philip Jonsson [ctb, cph] (pagebreak Lua filter), Albert Krewinkel [ctb, cph] (pagebreak Lua filter)", "Maintainer": "Yihui Xie ", - "Repository": "CRAN" + "Repository": "https://packagemanager.posit.co/cran/__linux__/jammy/latest" }, "rstudioapi": { "Package": "rstudioapi", - "Version": "0.17.1", + "Version": "0.18.0", "Source": "Repository", "Title": "Safely Access the RStudio API", "Description": "Access the RStudio API (if available) and provide informative error messages when it's not.", @@ -1943,19 +1957,22 @@ "License": "MIT + file LICENSE", "URL": "https://rstudio.github.io/rstudioapi/, https://github.com/rstudio/rstudioapi", "BugReports": "https://github.com/rstudio/rstudioapi/issues", - "RoxygenNote": "7.3.2", + "RoxygenNote": "7.3.3", "Suggests": [ "testthat", "knitr", "rmarkdown", "clipr", - "covr" + "covr", + "curl", + "jsonlite", + "withr" ], "VignetteBuilder": "knitr", "Encoding": "UTF-8", "NeedsCompilation": "no", "Author": "Kevin Ushey [aut, cre], JJ Allaire [aut], Hadley Wickham [aut], Gary Ritchie [aut], RStudio [cph]", - "Repository": "RSPM" + "Repository": "CRAN" }, "sass": { "Package": "sass", @@ -1991,7 +2008,7 @@ "NeedsCompilation": "yes", "Author": "Joe Cheng [aut], Timothy Mastny [aut], Richard Iannone [aut] (), Barret Schloerke [aut] (), Carson Sievert [aut, cre] (), Christophe Dervieux [ctb] (), RStudio [cph, fnd], Sass Open Source Foundation [ctb, cph] (LibSass library), Greter Marcel [ctb, cph] (LibSass library), Mifsud Michael [ctb, cph] (LibSass library), Hampton Catlin [ctb, cph] (LibSass library), Natalie Weizenbaum [ctb, cph] (LibSass library), Chris Eppstein [ctb, cph] (LibSass library), Adams Joseph [ctb, cph] (json.cpp), Trifunovic Nemanja [ctb, cph] (utf8.h)", "Maintainer": "Carson Sievert ", - "Repository": "CRAN" + "Repository": "https://packagemanager.posit.co/cran/__linux__/jammy/latest" }, "scales": { "Package": "scales", @@ -2035,7 +2052,7 @@ "NeedsCompilation": "no", "Author": "Hadley Wickham [aut], Thomas Lin Pedersen [cre, aut] (), Dana Seidel [aut], Posit Software, PBC [cph, fnd] (03wc8by49)", "Maintainer": "Thomas Lin Pedersen ", - "Repository": "CRAN" + "Repository": "https://packagemanager.posit.co/cran/__linux__/jammy/latest" }, "stringi": { "Package": "stringi", @@ -2073,7 +2090,7 @@ }, "stringr": { "Package": "stringr", - "Version": "1.5.2", + "Version": "1.6.0", "Source": "Repository", "Title": "Simple, Consistent Wrappers for Common String Operations", "Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"aut\", \"cre\", \"cph\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )", @@ -2082,7 +2099,7 @@ "URL": "https://stringr.tidyverse.org, https://github.com/tidyverse/stringr", "BugReports": "https://github.com/tidyverse/stringr/issues", "Depends": [ - "R (>= 3.6)" + "R (>= 4.1.0)" ], "Imports": [ "cli", @@ -2106,10 +2123,11 @@ ], "VignetteBuilder": "knitr", "Config/Needs/website": "tidyverse/tidytemplate", + "Config/potools/style": "explicit", "Config/testthat/edition": "3", "Encoding": "UTF-8", "LazyData": "true", - "RoxygenNote": "7.3.2", + "RoxygenNote": "7.3.3", "NeedsCompilation": "no", "Author": "Hadley Wickham [aut, cre, cph], Posit Software, PBC [cph, fnd]", "Maintainer": "Hadley Wickham ", @@ -2117,10 +2135,10 @@ }, "tibble": { "Package": "tibble", - "Version": "3.3.0", + "Version": "3.3.1", "Source": "Repository", "Title": "Simple Data Frames", - "Authors@R": "c(person(given = \"Kirill\", family = \"M\\u00fcller\", role = c(\"aut\", \"cre\"), email = \"kirill@cynkra.com\", comment = c(ORCID = \"0000-0002-1416-3412\")), person(given = \"Hadley\", family = \"Wickham\", role = \"aut\", email = \"hadley@rstudio.com\"), person(given = \"Romain\", family = \"Francois\", role = \"ctb\", email = \"romain@r-enthusiasts.com\"), person(given = \"Jennifer\", family = \"Bryan\", role = \"ctb\", email = \"jenny@rstudio.com\"), person(given = \"RStudio\", role = c(\"cph\", \"fnd\")))", + "Authors@R": "c( person(\"Kirill\", \"Müller\", , \"kirill@cynkra.com\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-1416-3412\")), person(\"Hadley\", \"Wickham\", , \"hadley@rstudio.com\", role = \"aut\"), person(\"Romain\", \"Francois\", , \"romain@r-enthusiasts.com\", role = \"ctb\"), person(\"Jennifer\", \"Bryan\", , \"jenny@rstudio.com\", role = \"ctb\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\"), comment = c(ROR = \"03wc8by49\")) )", "Description": "Provides a 'tbl_df' class (the 'tibble') with stricter checking and better formatting than the traditional data frame.", "License": "MIT + file LICENSE", "URL": "https://tibble.tidyverse.org/, https://github.com/tidyverse/tibble", @@ -2165,36 +2183,37 @@ "withr" ], "VignetteBuilder": "knitr", - "Encoding": "UTF-8", - "RoxygenNote": "7.3.2.9000", - "Config/testthat/edition": "3", - "Config/testthat/parallel": "true", - "Config/testthat/start-first": "vignette-formats, as_tibble, add, invariants", + "Config/autostyle/rmd": "false", "Config/autostyle/scope": "line_breaks", "Config/autostyle/strict": "true", - "Config/autostyle/rmd": "false", "Config/Needs/website": "tidyverse/tidytemplate", + "Config/testthat/edition": "3", + "Config/testthat/parallel": "true", + "Config/testthat/start-first": "vignette-formats, as_tibble, add, invariants", + "Config/usethis/last-upkeep": "2025-06-07", + "Encoding": "UTF-8", + "RoxygenNote": "7.3.3.9000", "NeedsCompilation": "yes", - "Author": "Kirill Müller [aut, cre] (ORCID: ), Hadley Wickham [aut], Romain Francois [ctb], Jennifer Bryan [ctb], RStudio [cph, fnd]", + "Author": "Kirill Müller [aut, cre] (ORCID: ), Hadley Wickham [aut], Romain Francois [ctb], Jennifer Bryan [ctb], Posit Software, PBC [cph, fnd] (ROR: )", "Maintainer": "Kirill Müller ", "Repository": "CRAN" }, "tidyr": { "Package": "tidyr", - "Version": "1.3.1", + "Version": "1.3.2", "Source": "Repository", "Title": "Tidy Messy Data", "Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"aut\", \"cre\")), person(\"Davis\", \"Vaughan\", , \"davis@posit.co\", role = \"aut\"), person(\"Maximilian\", \"Girlich\", role = \"aut\"), person(\"Kevin\", \"Ushey\", , \"kevin@posit.co\", role = \"ctb\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )", - "Description": "Tools to help to create tidy data, where each column is a variable, each row is an observation, and each cell contains a single value. 'tidyr' contains tools for changing the shape (pivoting) and hierarchy (nesting and 'unnesting') of a dataset, turning deeply nested lists into rectangular data frames ('rectangling'), and extracting values out of string columns. It also includes tools for working with missing values (both implicit and explicit).", + "Description": "Tools to help to create tidy data, where each column is a variable, each row is an observation, and each cell contains a single value. 'tidyr' contains tools for changing the shape (pivoting) and hierarchy (nesting and 'unnesting') of a dataset, turning deeply nested lists into rectangular data frames ('rectangling'), and extracting values out of string columns. It also includes tools for working with missing values (both implicit and explicit).", "License": "MIT + file LICENSE", "URL": "https://tidyr.tidyverse.org, https://github.com/tidyverse/tidyr", "BugReports": "https://github.com/tidyverse/tidyr/issues", "Depends": [ - "R (>= 3.6)" + "R (>= 4.1.0)" ], "Imports": [ "cli (>= 3.4.1)", - "dplyr (>= 1.0.10)", + "dplyr (>= 1.1.0)", "glue", "lifecycle (>= 1.0.3)", "magrittr", @@ -2202,7 +2221,7 @@ "rlang (>= 1.1.1)", "stringr (>= 1.5.0)", "tibble (>= 2.1.1)", - "tidyselect (>= 1.2.0)", + "tidyselect (>= 1.2.1)", "utils", "vctrs (>= 0.5.2)" ], @@ -2219,15 +2238,16 @@ "cpp11 (>= 0.4.0)" ], "VignetteBuilder": "knitr", + "Config/build/compilation-database": "true", "Config/Needs/website": "tidyverse/tidytemplate", "Config/testthat/edition": "3", "Encoding": "UTF-8", "LazyData": "true", - "RoxygenNote": "7.3.0", + "RoxygenNote": "7.3.3", "NeedsCompilation": "yes", "Author": "Hadley Wickham [aut, cre], Davis Vaughan [aut], Maximilian Girlich [aut], Kevin Ushey [ctb], Posit Software, PBC [cph, fnd]", "Maintainer": "Hadley Wickham ", - "Repository": "RSPM" + "Repository": "https://packagemanager.posit.co/cran/__linux__/jammy/latest" }, "tidyselect": { "Package": "tidyselect", @@ -2274,7 +2294,7 @@ }, "tinytex": { "Package": "tinytex", - "Version": "0.57", + "Version": "0.59", "Source": "Repository", "Type": "Package", "Title": "Helper Functions to Install and Maintain TeX Live, and Compile LaTeX Documents", @@ -2291,9 +2311,9 @@ "URL": "https://github.com/rstudio/tinytex", "BugReports": "https://github.com/rstudio/tinytex/issues", "Encoding": "UTF-8", - "RoxygenNote": "7.3.2", + "RoxygenNote": "7.3.3", "NeedsCompilation": "no", - "Author": "Yihui Xie [aut, cre, cph] (), Posit Software, PBC [cph, fnd], Christophe Dervieux [ctb] (), Devon Ryan [ctb] (), Ethan Heinzen [ctb], Fernando Cagua [ctb]", + "Author": "Yihui Xie [aut, cre, cph] (ORCID: ), Posit Software, PBC [cph, fnd], Christophe Dervieux [ctb] (ORCID: ), Devon Ryan [ctb] (ORCID: ), Ethan Heinzen [ctb], Fernando Cagua [ctb]", "Maintainer": "Yihui Xie ", "Repository": "CRAN" }, @@ -2360,7 +2380,7 @@ }, "vctrs": { "Package": "vctrs", - "Version": "0.6.5", + "Version": "0.7.3", "Source": "Repository", "Title": "Vector Helpers", "Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = \"aut\"), person(\"Lionel\", \"Henry\", , \"lionel@posit.co\", role = \"aut\"), person(\"Davis\", \"Vaughan\", , \"davis@posit.co\", role = c(\"aut\", \"cre\")), person(\"data.table team\", role = \"cph\", comment = \"Radix sort based on data.table's forder() and their contribution to R's order()\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )", @@ -2369,13 +2389,13 @@ "URL": "https://vctrs.r-lib.org/, https://github.com/r-lib/vctrs", "BugReports": "https://github.com/r-lib/vctrs/issues", "Depends": [ - "R (>= 3.5.0)" + "R (>= 4.0.0)" ], "Imports": [ "cli (>= 3.4.0)", "glue", "lifecycle (>= 1.0.3)", - "rlang (>= 1.1.0)" + "rlang (>= 1.1.7)" ], "Suggests": [ "bit64", @@ -2395,23 +2415,26 @@ "zeallot" ], "VignetteBuilder": "knitr", + "Config/build/compilation-database": "true", "Config/Needs/website": "tidyverse/tidytemplate", "Config/testthat/edition": "3", + "Config/testthat/parallel": "true", "Encoding": "UTF-8", + "KeepSource": "true", "Language": "en-GB", - "RoxygenNote": "7.2.3", + "RoxygenNote": "7.3.3", "NeedsCompilation": "yes", "Author": "Hadley Wickham [aut], Lionel Henry [aut], Davis Vaughan [aut, cre], data.table team [cph] (Radix sort based on data.table's forder() and their contribution to R's order()), Posit Software, PBC [cph, fnd]", "Maintainer": "Davis Vaughan ", - "Repository": "RSPM" + "Repository": "CRAN" }, "viridisLite": { "Package": "viridisLite", - "Version": "0.4.2", + "Version": "0.4.3", "Source": "Repository", "Type": "Package", "Title": "Colorblind-Friendly Color Maps (Lite Version)", - "Date": "2023-05-02", + "Date": "2026-02-03", "Authors@R": "c( person(\"Simon\", \"Garnier\", email = \"garnier@njit.edu\", role = c(\"aut\", \"cre\")), person(\"Noam\", \"Ross\", email = \"noam.ross@gmail.com\", role = c(\"ctb\", \"cph\")), person(\"Bob\", \"Rudis\", email = \"bob@rud.is\", role = c(\"ctb\", \"cph\")), person(\"Marco\", \"Sciaini\", email = \"sciaini.marco@gmail.com\", role = c(\"ctb\", \"cph\")), person(\"Antônio Pedro\", \"Camargo\", role = c(\"ctb\", \"cph\")), person(\"Cédric\", \"Scherer\", email = \"scherer@izw-berlin.de\", role = c(\"ctb\", \"cph\")) )", "Maintainer": "Simon Garnier ", "Description": "Color maps designed to improve graph readability for readers with common forms of color blindness and/or color vision deficiency. The color maps are also perceptually-uniform, both in regular form and also when converted to black-and-white for printing. This is the 'lite' version of the 'viridis' package that also contains 'ggplot2' bindings for discrete and continuous color and fill scales and can be found at .", @@ -2428,10 +2451,10 @@ ], "URL": "https://sjmgarnier.github.io/viridisLite/, https://github.com/sjmgarnier/viridisLite/", "BugReports": "https://github.com/sjmgarnier/viridisLite/issues/", - "RoxygenNote": "7.2.3", + "RoxygenNote": "7.3.3", "NeedsCompilation": "no", "Author": "Simon Garnier [aut, cre], Noam Ross [ctb, cph], Bob Rudis [ctb, cph], Marco Sciaini [ctb, cph], Antônio Pedro Camargo [ctb, cph], Cédric Scherer [ctb, cph]", - "Repository": "RSPM" + "Repository": "CRAN" }, "visNetwork": { "Package": "visNetwork", @@ -2476,20 +2499,20 @@ "RoxygenNote": "7.3.3", "NeedsCompilation": "no", "Author": "Almende B.V. and Contributors [aut, cph] (vis.js library in htmlwidgets/lib, https://visjs.org/, https://github.com/visjs/vis-network), Benoit Thieurmel [aut, cre] (R interface)", - "Repository": "CRAN" + "Repository": "https://packagemanager.posit.co/cran/__linux__/jammy/latest" }, "vroom": { "Package": "vroom", - "Version": "1.6.6", + "Version": "1.7.1", "Source": "Repository", "Title": "Read and Write Rectangular Text Data Quickly", - "Authors@R": "c( person(\"Jim\", \"Hester\", role = \"aut\", comment = c(ORCID = \"0000-0002-2739-7082\")), person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = \"aut\", comment = c(ORCID = \"0000-0003-4757-117X\")), person(\"Jennifer\", \"Bryan\", , \"jenny@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-6983-2759\")), person(\"Shelby\", \"Bearrows\", role = \"ctb\"), person(\"https://github.com/mandreyel/\", role = \"cph\", comment = \"mio library\"), person(\"Jukka\", \"Jylänki\", role = \"cph\", comment = \"grisu3 implementation\"), person(\"Mikkel\", \"Jørgensen\", role = \"cph\", comment = \"grisu3 implementation\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )", + "Authors@R": "c( person(\"Jim\", \"Hester\", role = \"aut\", comment = c(ORCID = \"0000-0002-2739-7082\")), person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = \"aut\", comment = c(ORCID = \"0000-0003-4757-117X\")), person(\"Jennifer\", \"Bryan\", , \"jenny@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-6983-2759\")), person(\"Shelby\", \"Bearrows\", role = \"ctb\"), person(\"https://github.com/mandreyel/\", role = \"cph\", comment = \"mio library\"), person(\"Jukka\", \"Jylänki\", role = \"cph\", comment = \"grisu3 implementation\"), person(\"Mikkel\", \"Jørgensen\", role = \"cph\", comment = \"grisu3 implementation\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\"), comment = c(ROR = \"03wc8by49\")) )", "Description": "The goal of 'vroom' is to read and write data (like 'csv', 'tsv' and 'fwf') quickly. When reading it uses a quick initial indexing step, then reads the values lazily , so only the data you actually use needs to be read. The writer formats the data in parallel and writes to disk asynchronously from formatting.", "License": "MIT + file LICENSE", - "URL": "https://vroom.r-lib.org, https://github.com/tidyverse/vroom", + "URL": "https://vroom.tidyverse.org, https://github.com/tidyverse/vroom", "BugReports": "https://github.com/tidyverse/vroom/issues", "Depends": [ - "R (>= 3.6)" + "R (>= 4.1)" ], "Imports": [ "bit64", @@ -2499,7 +2522,7 @@ "hms", "lifecycle (>= 1.0.3)", "methods", - "rlang (>= 0.4.2)", + "rlang (>= 1.1.0)", "stats", "tibble (>= 2.0.0)", "tidyselect", @@ -2539,14 +2562,16 @@ "Config/Needs/website": "nycflights13, tidyverse/tidytemplate", "Config/testthat/edition": "3", "Config/testthat/parallel": "false", + "Config/usethis/last-upkeep": "2025-11-25", "Copyright": "file COPYRIGHTS", "Encoding": "UTF-8", "Language": "en-US", "RoxygenNote": "7.3.3", + "Config/build/compilation-database": "true", "NeedsCompilation": "yes", - "Author": "Jim Hester [aut] (ORCID: ), Hadley Wickham [aut] (ORCID: ), Jennifer Bryan [aut, cre] (ORCID: ), Shelby Bearrows [ctb], https://github.com/mandreyel/ [cph] (mio library), Jukka Jylänki [cph] (grisu3 implementation), Mikkel Jørgensen [cph] (grisu3 implementation), Posit Software, PBC [cph, fnd]", + "Author": "Jim Hester [aut] (ORCID: ), Hadley Wickham [aut] (ORCID: ), Jennifer Bryan [aut, cre] (ORCID: ), Shelby Bearrows [ctb], https://github.com/mandreyel/ [cph] (mio library), Jukka Jylänki [cph] (grisu3 implementation), Mikkel Jørgensen [cph] (grisu3 implementation), Posit Software, PBC [cph, fnd] (ROR: )", "Maintainer": "Jennifer Bryan ", - "Repository": "CRAN" + "Repository": "https://packagemanager.posit.co/cran/__linux__/jammy/latest" }, "withr": { "Package": "withr", @@ -2588,7 +2613,7 @@ }, "xfun": { "Package": "xfun", - "Version": "0.54", + "Version": "0.57", "Source": "Repository", "Type": "Package", "Title": "Supporting Functions for Packages Maintained by 'Yihui Xie'", @@ -2621,7 +2646,7 @@ "magick", "yaml", "data.table", - "qs" + "qs2" ], "License": "MIT + file LICENSE", "URL": "https://github.com/yihui/xfun", @@ -2636,23 +2661,29 @@ }, "yaml": { "Package": "yaml", - "Version": "2.3.10", + "Version": "2.3.12", "Source": "Repository", "Type": "Package", "Title": "Methods to Convert R Data to YAML and Back", - "Date": "2024-07-22", + "Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = \"cre\", comment = c(ORCID = \"0000-0003-4757-117X\")), person(\"Shawn\", \"Garbett\", , \"shawn.garbett@vumc.org\", role = \"ctb\", comment = c(ORCID = \"0000-0003-4079-5621\")), person(\"Jeremy\", \"Stephens\", role = c(\"aut\", \"ctb\")), person(\"Kirill\", \"Simonov\", role = \"aut\"), person(\"Yihui\", \"Xie\", role = \"ctb\", comment = c(ORCID = \"0000-0003-0645-5666\")), person(\"Zhuoer\", \"Dong\", role = \"ctb\"), person(\"Jeffrey\", \"Horner\", role = \"ctb\"), person(\"reikoch\", role = \"ctb\"), person(\"Will\", \"Beasley\", role = \"ctb\", comment = c(ORCID = \"0000-0002-5613-5006\")), person(\"Brendan\", \"O'Connor\", role = \"ctb\"), person(\"Michael\", \"Quinn\", role = \"ctb\"), person(\"Charlie\", \"Gao\", role = \"ctb\"), person(c(\"Gregory\", \"R.\"), \"Warnes\", role = \"ctb\"), person(c(\"Zhian\", \"N.\"), \"Kamvar\", role = \"ctb\") )", + "Description": "Implements the 'libyaml' 'YAML' 1.1 parser and emitter () for R.", + "License": "BSD_3_clause + file LICENSE", + "URL": "https://yaml.r-lib.org, https://github.com/r-lib/yaml/", + "BugReports": "https://github.com/r-lib/yaml/issues", "Suggests": [ - "RUnit" + "knitr", + "rmarkdown", + "testthat (>= 3.0.0)" ], - "Author": "Shawn P Garbett [aut], Jeremy Stephens [aut, cre], Kirill Simonov [aut], Yihui Xie [ctb], Zhuoer Dong [ctb], Hadley Wickham [ctb], Jeffrey Horner [ctb], reikoch [ctb], Will Beasley [ctb], Brendan O'Connor [ctb], Gregory R. Warnes [ctb], Michael Quinn [ctb], Zhian N. Kamvar [ctb], Charlie Gao [ctb]", - "Maintainer": "Shawn Garbett ", - "License": "BSD_3_clause + file LICENSE", - "Description": "Implements the 'libyaml' 'YAML' 1.1 parser and emitter () for R.", - "URL": "https://github.com/vubiostat/r-yaml/", - "BugReports": "https://github.com/vubiostat/r-yaml/issues", + "Config/testthat/edition": "3", + "Config/Needs/website": "tidyverse/tidytemplate", + "Encoding": "UTF-8", + "RoxygenNote": "7.3.3", + "VignetteBuilder": "knitr", "NeedsCompilation": "yes", - "Repository": "RSPM", - "Encoding": "UTF-8" + "Author": "Hadley Wickham [cre] (ORCID: ), Shawn Garbett [ctb] (ORCID: ), Jeremy Stephens [aut, ctb], Kirill Simonov [aut], Yihui Xie [ctb] (ORCID: ), Zhuoer Dong [ctb], Jeffrey Horner [ctb], reikoch [ctb], Will Beasley [ctb] (ORCID: ), Brendan O'Connor [ctb], Michael Quinn [ctb], Charlie Gao [ctb], Gregory R. Warnes [ctb], Zhian N. Kamvar [ctb]", + "Maintainer": "Hadley Wickham ", + "Repository": "CRAN" } } }