feat(mpnn): report per-design confidence in inference outputs#306

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daylight-00 wants to merge 5 commits into

RosettaCommons:productionfrom

daylight-00:feat/mpnn-confidence-output

Commits on Jun 5, 2026

feat(mpnn): add overall/ligand confidence to inference outputs
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test(mpnn): add unit tests and docstrings for sampled confidence metrics
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refactor(mpnn): rename confidence input to `logits`; add interface test
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Commits on Jun 7, 2026

refactor(mpnn): wrap confidence metrics and store per-residue confidence in a dedicated field
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committed

Commits on Jun 18, 2026

refactor(mpnn): apply review feedback — naming, explicit kwargs, no-interface edge case
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