Type annotations and unit tests for the shared utils layer and rf3#320

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lyskov-ai wants to merge 11 commits into

RosettaCommons:productionfrom

lyskov-ai:0037-foundry-alignment-weights-mypy-strict-and-tests

Commits on Jun 9, 2026

test(rf3): add CPU unit tests for closed-form loss gradients and util_module

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test(rf3): add CPU unit tests for layer_utils shape helpers

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test(rf3): add CPU unit tests for the diffusion sampler and outer-product layer

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test(rf3): add CPU unit tests for the mlff and triangle-attention layers

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test(rf3): add CPU unit tests for the af3_losses symmetry-resolution helpers

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test(rf3): add CPU unit tests for chiral and iPTM metric orchestration

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chore(rf3): move paired_msa mypy suppression into the file

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