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refactor(server): consolidate core+graph+admin into modules/server (sub-PR 4 of 2026.5) #1073

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refactor(server): adjust ruff + coverage paths for modules/server layout

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refactor(server): consolidate core+graph+admin into modules/server (sub-PR 4 of 2026.5) #1073

refactor(server): adjust ruff + coverage paths for modules/server layout
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