Skip to content

Pull requests: nextflow-io/nextflow

New pull request New
92 Open 2,524 Closed
92 Open 2,524 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Reviews
Filter by reviews
No reviews Review required Approved review Changes requested
Assignee
Filter by who’s assigned
Assigned to nobody Loading
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Pull requests list

Split CLI config handling out of ConfigBuilder
#7373 opened Jul 21, 2026 by bentsherman Member Loading… 26.10
1
Refactor HubOptions from a trait into a record
#7372 opened Jul 21, 2026 by bentsherman Member Loading… 26.10
1
build(java): align to Java 25 toolchain, target Java 17 via --release
#7370 opened Jul 21, 2026 by pditommaso Member Loading…
1
Add seqera.executor.maxCpusPerUser option
#7367 opened Jul 21, 2026 by jonmarti Collaborator • Draft
1
Fix PBS Pro server status query executor/pbspro
#7366 opened Jul 21, 2026 by jscgh Loading…
1
1
Fix publish mode override when re-publishing an existing file
#7364 opened Jul 20, 2026 by bentsherman Member Loading…
1
4
Support workflow modules (kind: Workflow) in the module system
#7363 opened Jul 20, 2026 by jorgee Contributor • Draft
chore: update dependency ch.qos.logback:logback-core to v1.5.38
#7362 opened Jul 20, 2026 by seqeralabs-renovate Bot Loading…
1 task
2
Fix spurious 'Unrecognized config option' warning for wave.build.compression and wave.build.conda lang/config
#7355 opened Jul 17, 2026 by pditommaso Member Loading…
12
Add singularity.resourceLimits config option software/singularity
#7352 opened Jul 16, 2026 by bentsherman Member Loading…
1
4
Formatter overhaul: never remove comments, fmt directives, line wrapping, K&R style
#7346 opened Jul 16, 2026 by ewels Member Loading…
1
Add scheduling.provisioningModel per-process hint for Google Batch
#7343 opened Jul 15, 2026 by reece-maticebio Loading…
1
1
ADR: Workflow modules lang/modules
#7342 opened Jul 15, 2026 by bentsherman Member Loading… 26.10
29
Update nf-azure: Add Azure Compute Gallery image and verification options executor/azure-batch
#7338 opened Jul 15, 2026 by LennyBEL Loading…
21
Update nf-azure: Add Azure Batch node communication mode option executor/azure-batch
#7337 opened Jul 15, 2026 by LennyBEL Loading…
8
Fix concurrent modification with job arrays
#7332 opened Jul 13, 2026 by bentsherman Member Loading…
1
5
Add ast-grep Groovy lint foundations
#7330 opened Jul 13, 2026 by edmundmiller Member Loading…
2
Fix jackson & netty CVEs via api-scoped dependency constraints
#7329 opened Jul 13, 2026 by jorgee Contributor Loading…
1
Add support for multiple Azure Container Registries executor/azure-batch
#7318 opened Jul 9, 2026 by adamrtalbot Collaborator Loading…
1
Package directive
#7317 opened Jul 9, 2026 by evanroyrees • Draft
Add managed identity support for Azure Batch container registries
#7316 opened Jul 9, 2026 by adamrtalbot Collaborator Loading…
5
build(java): align toolchain and runtime to Java 25 (bytecode 17)
#7310 opened Jul 8, 2026 by cristianrcv Contributor Loading…
1
feat: add plugin directory trust guard to harden shared plugin caches
#7308 opened Jul 8, 2026 by aknownuser Loading…
9
fix: prevent world-readable race window when storing local secrets security
#7307 opened Jul 8, 2026 by aknownuser Loading…
2
Fix AWS Batch task polling forever when the job is missing from the DescribeJobs response
#7302 opened Jul 3, 2026 by item084 Loading…
1
1
ProTip! Type g i on any issue or pull request to go back to the issue listing page.