Repositories list

• CRISTINA-3D-Pulseq

  Public
  This repository is part of an abstract submitted to ISMRM 2026. You can find a ready-to-compile open-source implementation of the 3D sodium MQC sequence CRISTIN…

  MATLAB

  •

  GNU General Public License v3.0

  •00 forks•11 star•00 issues•00 pull requests•Updated May 12, 2026May 12, 2026

• B1-Mapping-Seq

  Public
  This repository is part of an abstract submitted to ISMRM 2026. You can find open-source B1 mapping approaches (Bloch-Siegert, Double Flip Angle) implemented in…

  MATLAB

  •

  GNU General Public License v3.0

  •11 fork•33 stars•00 issues•00 pull requests•Updated May 12, 2026May 12, 2026

• Groupwise_Multiresolution_Deformable_Medical_Image_Registration

  Public
  Groupwise multiresolution network for deformable medical image registration.

  Python

  •

  GNU General Public License v3.0

  •00 forks•11 star•00 issues•00 pull requests•Updated Apr 17, 2025Apr 17, 2025

• DMD_Lung

  Public
  Codes and phantom data for "Dynamic Mode Decomposition of Dynamic MRI for Assessment of Pulmonary Ventilation and Perfusion"

  MATLAB

  •22 forks•00 stars•00 issues•00 pull requests•Updated Mar 27, 2025Mar 27, 2025

• nnUNet-ADPKD-kidney-segmentation

  Public
  00 forks•22 stars•00 issues•00 pull requests•Updated Aug 1, 2024Aug 1, 2024

• Multistep_Networks_for_Deformable_Medical_Image_Registration

  Public
  Multistep Networks for Deformable Medical Image Registration

  Python

  •

  GNU General Public License v3.0

  •00 forks•22 stars•00 issues•00 pull requests•Updated Jul 31, 2024Jul 31, 2024

• 23Na-MQC-MRI

  Public
  Contains the code for image reconstruction of accelerated 23Na MQC MRI

  MATLAB

  •00 forks•22 stars•00 issues•00 pull requests•Updated Jun 10, 2024Jun 10, 2024

• UMMPerfusion

  Public
  Open Source Perfusion Analysis Plugin for OsiriX and Horos

  magnetic-resonance-imagingdicom-viewercompartmental-models+ 5

  magnetic-resonance-imagingdicom-viewercompartmental-modelsosirixdeconvolution-methodsperfusiondynamic-contrast-enhancedhoros

  C++

  •

  BSD 3-Clause "New" or "Revised" License

  •22 forks•22 stars•00 issues•00 pull requests•Updated Apr 5, 2024Apr 5, 2024

• Singlepulse_-TQ_Code

  Public
  Example for the use of the SPTQ method to determine the 23Na TQ signal from the FID

  MATLAB

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 20, 2024Mar 20, 2024

• UMM-CKM-Segmentation-Architectures

  Public
  A collection of segmentation architectures for medical imaging

  Python

  •

  GNU General Public License v3.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 28, 2024Feb 28, 2024

• Seg-Class-Reg-Basis

  Public
  The base module for segemntation, classification and regression tasks

  Python

  •

  GNU General Public License v3.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 26, 2024Feb 26, 2024

• Rectal-Cancer-Normalization-Segmentation-Prediction

  Public
  This repository tests MRI normalization with multiple downstream tasks

  Python

  •

  GNU General Public License v3.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 26, 2024Feb 26, 2024

• Multistage_Network_for_Rigid_Affine_Deformable_Medical_Image_Registration

  Public
  Multistage network for rigid-affine-deformable medical image registration

  Python

  •

  GNU General Public License v3.0

  •00 forks•44 stars•00 issues•00 pull requests•Updated Jan 8, 2024Jan 8, 2024

• VirtMRI

  Public
  VirtMRI: Generate images for different MRI Sequences in your Browser. Written in JavaScript and C compiled to WebASM

  mriprotonteaching-tool+ 2

  mriprotonteaching-toolmri-reconstructionx-nuclei

  SCSS

  •

  MIT License

  •11 fork•33 stars•00 issues•00 pull requests•Updated Nov 27, 2023Nov 27, 2023

• FORCASTER

  Public
  Source code for the FORCASTER and FORCASTEST algorithm

  Python

  •11 fork•00 stars•00 issues•00 pull requests•Updated Aug 14, 2023Aug 14, 2023

• Networks_for_Affine_Medical_Image_Registration

  Public
  Affine medical image registration using deep learning

  deep-learningimage-registrationmedical-image-registration

  deep-learningimage-registrationmedical-image-registration

  Python

  •

  GNU General Public License v3.0

  •44 forks•2424 stars•00 issues•00 pull requests•Updated Jun 22, 2023Jun 22, 2023

• .github

  Public
  Description of the organization

  00 forks•00 stars•00 issues•00 pull requests•Updated Apr 1, 2023Apr 1, 2023

• UMM_ACR_QE

  Public
  Matlab package for analysis MRI of the ACR quality control phantom

  quality-controlacrphantom+ 1

  quality-controlacrphantommri-acquisition

  MATLAB

  •

  GNU General Public License v3.0

  •22 forks•66 stars•00 issues•00 pull requests•Updated Mar 31, 2023Mar 31, 2023