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Liquid Cell Atlas

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Deconvolute cell-free DNA using methylation patterns, with a focus on ultra-low frequency cell populations and immune lineages.

Core Components

Pipeline

The workflow directory includes a detailed snakemake pipeline to analyze both EM-seq and BS-seq data, with reproducible QC.

Data

The data directory contains the results of our large sequencing experiments in the manuscript, including melanoma, CRC, and healthy samples.

Citation

  • TBD

License

Not yet determined. For now, all rights reserved. At time of publication, we may consider GPL/MIT, etc. depending on commercial licensing thoughts.

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An integrated deconvolution approach to cfDNA methylation data.

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