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Numpy and Pandas Conflict

Status: Open.

#284 In theislab/scarches;

· jccarado opened on Jul 16, 2026

pandas version conflict

Status: Open.

#281 In theislab/scarches;

· GatewayPhd opened on Jan 9, 2026

Update the doc to recommend to use python/3.10

Status: Open.

#275 In theislab/scarches;

· qiyubio opened on Sep 5, 2025

scarches_linux.yaml fails on HPC RHEL7 due to pip build error for ml_dtypes

Status: Open.

#274 In theislab/scarches;

· arashabadi opened on Sep 2, 2025

Inconsistent input data in scPoli tutorial: normalized values instead of raw counts

Status: Open.

#271 In theislab/scarches;

· zerostwo opened on May 31, 2025

Error when combining adata objects using scPoli

Status: Open.

#270 In theislab/scarches;

· poloarol opened on May 29, 2025

HLCA reference model incompatible with scvi-tools > 1.0.3

Status: Open.

#269 In theislab/scarches;

· luisa-cusick opened on May 13, 2025

AttributeError: module 'scarches.models' has no attribute 'organize_multiome_anndatas'

Status: Open.

#268 In theislab/scarches;

· somsomikim opened on Apr 15, 2025

Problem installing scArches

Status: Open.

#266 In theislab/scarches;

· roseboom2191 opened on Mar 20, 2025

schpl and visions have conflicting pandas requirements

Status: Open.

#262 In theislab/scarches;

· galtay-tempus opened on Jan 29, 2025

scPoli dimensionality and other parameters

Status: Open.

#260 In theislab/scarches;

· officialprofile opened on Dec 19, 2024

cell_type still 'Unknown' after training with scANVI

Status: Open.

#259 In theislab/scarches;

· robertzeibich opened on Nov 17, 2024