Hardware and software for accessible, extensible, and scalable bioreactors. Built on Raspberry Pi.
An open-source Raspberry-Pi based photobioreactor for cultivating and assessing physiology (photosynthesis & productivity) in microscopic algae.
Bio Reactor Design (BiRD): a toolbox to simulate and analyze different designs of bioreactors in OpenFOAM
Lists of bioreactor-related useful information.
Raspberry Pi communicates with 4 Arduinos over serial USB connection to regulate flow through 24 peristaltic pumps for use in a bioreactor.
Python package for processing of DASware raw data exports.
Arduino code for pH, temperature monitoring, data logger, turbiostat, control LED for mimicking sun pattern. Python script for the simulation of microalgae growth with real solar profiles.
A hybrid modeling framework combining neural networks with physics-based constraints for bioreactor process optimization and control.
Kinetic model and optimization of co-culture bioreactor with in-situ product removal
Software for monitoring metagenomes using nanopore sequencing reads
The ultimate control system and sensor logger
The Bioreactor Project for Engineering Challenges at UCL with students from Electronic and Electrical Engineering (EEE)
Dockerization of Hackuarium/nodered-bioreactor-gui
Bioreactor system regulating internal stirring speed, pH and temperature of a yeast TB vaccine solution. Joint EEE-CS project in my UCL Electronic and Electrical Engineering degree.
🧪 A UI and control system for a small bioreactor
Agentic AI harness for complex, autonomous, long-horizon biological tasks: pre-experiment DoE planning in fermentation, bioprocess, and biomanufacturing, designed with biosafety in mind. Readiness gating, scale-up and scale-down bridging.
Supervisory control and instrumentation system for bioreactor processes with real-time monitoring, data acquisition, and pump actuation.
Microalgal growth simulation for CO₂ capture estimation. Monod kinetics, Steele photoinhibition, and CTMI temperature modeling for Chlorella vulgaris under Surat, India's tropical climate.
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